Data search
Results for MligTC455_47604
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47604 | 279 | 5.82 | Mlig455_019519 | Neo: - Age: - |
Mlig455_019519 {REF} {Length: 2121} {Pfam: Ribosomal protein S31e [PF17067.7, score=26.9]} {RNA1509_35991} {RNA1310_34204.1} {RNA815_38960} |
Cumulative graph for MligTC455_47604
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.738 | 3.026 | 0.25633 | 0.90471 | |
| RegionR2 | 1.171 | 3.026 | 0.06613 | 0.31176 | |
| RegionR3 | 0.357 | 3.026 | 0.47749 | 0.98103 | |
| RegionR4 | -1.089 | 3.026 | 0.05602 | 0.20835 | |
| RegionR5 | 0.512 | 3.026 | 0.22337 | 0.52630 | |
| RegionR6 | 0.734 | 3.026 | 0.13897 | 0.67000 | |
| RegionR7 | -0.193 | 3.026 | 0.80557 | 1.00000 | |
| RegionR8 | 0.245 | 3.026 | 0.78612 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.252 | 3.026 | 0.47750 | 1.00000 | |
| RegenerationR2 | 0.262 | 3.026 | 0.56754 | 0.90138 | |
| RegenerationR3 | 0.507 | 3.026 | 0.32689 | 0.75371 | |
| RegenerationR4 | 0.912 | 3.026 | 0.08545 | 0.46099 | |
| RegenerationR5 | 0.127 | 3.026 | 0.76063 | 0.97584 | |
| RegenerationR6 | -0.094 | 3.026 | 0.86343 | 1.00000 | |
| RegenerationBL | -0.135 | 3.026 | 0.86498 | 1.00000 | |
| RegenerationTP | -0.877 | 3.026 | 0.38081 | 0.81624 |
Genes with expression patterns similar to MligTC455_47604
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47604 | 279 | 5.82 | Mlig455_019519 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019519 {REF} {Length: 2121} {Pfam: Ribosomal protein S31e [PF17067.7, score=26.9]} {RNA1509_35991} {RNA1310_34204.1} {RNA815_38960} | |
| 2. | MligTC455_22940 | 125 | 2.6 | Mlig455_008414 | Neo: - Age: - |
ERCC5 | 1.744 | - | - | - | 0.773 | 0.971 | - | Mlig455_008414 {REF} {Length: 2753} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=78.0]; 5'-3' exonuclease, C-terminal SAM fold [PF01367.22, score=24.2]} {Human: ENSG00000134899, ERCC5, ERCC excision repair 5, endonuclease, [RH, Score=192, Expect=1e-49]; ENSG00000270181, BIVM-ERCC5, BIVM-ERCC5 readthrough, [RH, Score=192, Expect=1e-49]} {Mouse: ENSMUSG00000026048, Ercc5, excision repair cross-complementing rodent repair deficiency, complementation group 5, [RH, Score=189, Expect=6e-49]} {Dmel: FBgn0002887, mus201, mutagen-sensitive 201, [RH, Score=179, Expect=5e-46]} {Celegans: WBGene00019004, xpg-1, XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog, [RH, Score=105, Expect=6e-23]} {Smed: dd_Smed_v6_10808_0_1, dd_Smed_v6_10808_0_1, [RH, Score=189, Expect=7e-50]} {RNA1509_14172} {RNA1310_4988} {RNA815_6998} |
| 3. | MligTC455_09304 | 155 | 3.23 | Mlig455_065453 | Neo: - Age: Down-Up-Down Region-enriched R4: 3.745/0.02737 |
0.967 | 0.967 | - | - | - | - | - | Mlig455_065453 {REF} {Length: 2759} {TRANSSPLICED} {RNA1509_35599} {RNA1310_29110} {RNA815_21725} | |
| 4. | MligTC455_52834 | 181 | 3.78 | Mlig455_033318 | Neo: - Age: - |
CCDC112 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_033318 {REF} {Length: 3199} {TRANSSPLICED} {Pfam: Transcriptional regulator, Out at first [PF14941.8, score=49.7]} {Human: ENSG00000164221, CCDC112, coiled-coil domain containing 112, [Score=184, Expect=2e-49]} {Mouse: ENSMUSG00000071855, Ccdc112, coiled-coil domain containing 112, [Score=174, Expect=3e-46]} {Smed: dd_Smed_v6_12448_0_1, dd_Smed_v6_12448_0_1, [RH, Score=201, Expect=2e-56]} {RNA1509_16362, RNA1509_36234, RNA1509_46670} {RNA1310_3182, RNA1509_16362, RNA1509_36234} {RNA1509_16362, RNA1509_36234, RNA815_6554} |
| 5. | MligTC455_22937 | 308 | 6.41 | Mlig455_008400, Mlig455_008416, Mlig455_064835 | Neo: - Age: Up-Down-Up |
0.95 | - | - | - | - | 0.950 | - | Mlig455_008400 {REF} {Length: 2108} {RNA1509_17921} {RNA1310_13833.1} {RNA815_29396} Mlig455_008416 {REF} {Length: 9323} {RNA1509_34349} {RNA1310_9875.1, RNA1509_34349} {RNA1509_34349, RNA815_18034} Mlig455_064835 {REF} {Length: 2479} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=125.4]; RNase H [PF00075.26, score=47.5]} {RNA1509_50041} {RNA1310_1401} {RNA815_252.1} |
|
| 6. | MligTC455_50332 | 167 | 3.47 | Mlig455_045442 | Neo: - Age: - |
TGFBR1 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_045442 {REF} {Length: 2893} {Pfam: Protein kinase domain [PF00069.27, score=95.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=92.0]; ABC1 atypical kinase-like domain [PF03109.18, score=30.4]; Transforming growth factor beta type I GS-motif [PF08515.14, score=20.1]} {Human: ENSG00000106799, TGFBR1, transforming growth factor beta receptor 1, [Score=261, Expect=4e-81]; ENSG00000135503, ACVR1B, activin A receptor type 1B, [Score=254, Expect=3e-78]} {Mouse: ENSMUSG00000007613, Tgfbr1, transforming growth factor, beta receptor I, [Score=263, Expect=3e-82]; ENSMUSG00000000532, Acvr1b, activin A receptor, type 1B, [Score=253, Expect=2e-77]} {Dmel: FBgn0011300, babo, baboon, [Score=259, Expect=3e-79]} {Celegans: WBGene00000897, daf-1, Cell surface receptor daf-1, [Score=187, Expect=1e-51]} {Smed: dd_Smed_v6_3426_0_1, dd_Smed_v6_3426_0_1, [Score=229, Expect=2e-67]} {RNA1509_17304, RNA1509_38608} {RNA1310_10744, RNA1509_38608} {RNA1509_38608, RNA815_11070} |
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