TomoSeq data search

Data search

Results for MligTC455_22948

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_22948	1477	30.78	Mlig455_015227	Neo: - Age: - Region-enriched R3: 1.320/0.00028	C20orf85	Mlig455_015227 {REF} {Length: 3065} {Pfam: Normal lung function maintenance, Low in Lung Cancer 1 protein [PF14945.8, score=128.4]} {Human: ENSG00000124237, C20orf85, chromosome 20 open reading frame 85, [RH, Score=85.1, Expect=3e-21]} {Mouse: ENSMUSG00000027518, 1700021F07Rik, RIKEN cDNA 1700021F07 gene, [RH, Score=84.7, Expect=2e-21]} {Smed: dd_Smed_v6_2729_0_1, dd_Smed_v6_2729_0_1, [RH, Score=145, Expect=3e-45]} {RNA1509_16311} {RNA1310_26269} {RNA815_13848}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_22948

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.108	5.255	0.00994	0.29171
RegionR2	0.741	5.255	0.04400	0.24629
RegionR3	1.32	5.255	0.00000	0.00028
RegionR4	0.184	5.255	0.58991	0.90494
RegionR5	0.24	5.255	0.39612	0.75258
RegionR6	0.466	5.255	0.12834	0.64880
RegionR7	-0.391	5.255	0.29535	0.93028
RegionR8	-0.452	5.255	0.30024	0.93092

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.241	5.255	0.85967	1.00000
RegenerationR2	-0.054	5.255	0.87085	1.00000
RegenerationR3	-0.763	5.255	0.03070	0.31364
RegenerationR4	-0.128	5.255	0.72922	0.96431
RegenerationR5	-0.328	5.255	0.34882	0.76363
RegenerationR6	-0.562	5.255	0.12950	0.44240
RegenerationBL	-1.266	5.255	0.00978	0.09935
RegenerationTP	0.144	5.255	0.74892	1.00000

Genes with expression patterns similar to MligTC455_22948

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22948	1477	30.78	Mlig455_015227	Neo: - Age: - Region-enriched R3: 1.320/0.00028	C20orf85	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015227 {REF} {Length: 3065} {Pfam: Normal lung function maintenance, Low in Lung Cancer 1 protein [PF14945.8, score=128.4]} {Human: ENSG00000124237, C20orf85, chromosome 20 open reading frame 85, [RH, Score=85.1, Expect=3e-21]} {Mouse: ENSMUSG00000027518, 1700021F07Rik, RIKEN cDNA 1700021F07 gene, [RH, Score=84.7, Expect=2e-21]} {Smed: dd_Smed_v6_2729_0_1, dd_Smed_v6_2729_0_1, [RH, Score=145, Expect=3e-45]} {RNA1509_16311} {RNA1310_26269} {RNA815_13848}
2.	MligTC455_22949	3351	69.82	Mlig455_015109	Neo: - Age: Down-Up-Up	C20orf85	5.06	0.957	0.705	0.958	0.712	0.780	0.948	Mlig455_015109 {REF} {Length: 1203} {Pfam: Normal lung function maintenance, Low in Lung Cancer 1 protein [PF14945.8, score=128.5]} {Human: ENSG00000124237, C20orf85, chromosome 20 open reading frame 85, [RH, Score=85.5, Expect=1e-21]} {Mouse: ENSMUSG00000027518, 1700021F07Rik, RIKEN cDNA 1700021F07 gene, [RH, Score=85.1, Expect=1e-21]} {Smed: dd_Smed_v6_2729_0_1, dd_Smed_v6_2729_0_1, [RH, Score=145, Expect=2e-45]} {RNA1509_16311} {RNA1310_26269} {RNA815_13848}
3.	MligTC455_24377	2329	48.52	Mlig455_024438	Neo: - Age: -		1.688	-	-	-	0.951	0.737	-	Mlig455_024438 {REF} {Length: 3539} {TRANSSPLICED} {Pfam: Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator [PF16516.7, score=32.4]; Zn-finger in Ran binding protein and others [PF00641.20, score=29.5]} {RNA1509_12187, RNA1509_15360, RNA1509_2047, RNA1509_21571, RNA1509_22144, RNA1509_25327, RNA1509_26194, RNA1509_27281, RNA1509_51907} {RNA1310_11947.1, RNA1509_12187, RNA1509_15360, RNA1509_2047, RNA1509_21571, RNA1509_22144, RNA1509_25327, RNA1509_26194, RNA1509_27281, RNA1509_51907} {RNA1509_12187, RNA1509_15360, RNA1509_2047, RNA1509_21571, RNA1509_22144, RNA1509_25327, RNA1509_26194, RNA1509_27281, RNA1509_51907, RNA815_24660}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_22948

1477

30.78

Mlig455_015227

Neo: -

Age: -

Region-enriched R3: 1.320/0.00028

C20orf85

1.000

MligTC455_22949

3351

69.82

Mlig455_015109

Neo: -

Age: Down-Up-Up

C20orf85

5.06

0.957

0.705

0.958

0.712

0.780

0.948

Mlig455_015109 {REF} {Length: 1203} {Pfam: Normal lung function maintenance, Low in Lung Cancer 1 protein [PF14945.8, score=128.5]} {Human: ENSG00000124237, C20orf85, chromosome 20 open reading frame 85, [RH, Score=85.5, Expect=1e-21]} {Mouse: ENSMUSG00000027518, 1700021F07Rik, RIKEN cDNA 1700021F07 gene, [RH, Score=85.1, Expect=1e-21]} {Smed: dd_Smed_v6_2729_0_1, dd_Smed_v6_2729_0_1, [RH, Score=145, Expect=2e-45]} {RNA1509_16311} {RNA1310_26269} {RNA815_13848}

MligTC455_24377

2329

48.52

Mlig455_024438

Neo: -

Age: -

1.688

0.951

0.737

Mlig455_024438 {REF} {Length: 3539} {TRANSSPLICED} {Pfam: Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator [PF16516.7, score=32.4]; Zn-finger in Ran binding protein and others [PF00641.20, score=29.5]} {RNA1509_12187, RNA1509_15360, RNA1509_2047, RNA1509_21571, RNA1509_22144, RNA1509_25327, RNA1509_26194, RNA1509_27281, RNA1509_51907} {RNA1310_11947.1, RNA1509_12187, RNA1509_15360, RNA1509_2047, RNA1509_21571, RNA1509_22144, RNA1509_25327, RNA1509_26194, RNA1509_27281, RNA1509_51907} {RNA1509_12187, RNA1509_15360, RNA1509_2047, RNA1509_21571, RNA1509_22144, RNA1509_25327, RNA1509_26194, RNA1509_27281, RNA1509_51907, RNA815_24660}