Data search


search
Exact
Search

Results for MligTC455_22991

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22991 15745 328.01 Mlig455_046872

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.284

ATP5PD Mlig455_046872 {REF} {Length: 1034} {TRANSSPLICED} {Pfam: ATP synthase D chain, mitochondrial (ATP5H) [PF05873.14, score=115.2]} {Human: ENSG00000167863, ATP5PD, ATP synthase peripheral stalk subunit d, [RH, Score=74.3, Expect=1e-16]} {Mouse: ENSMUSG00000034566, Atp5h, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D, [RH, Score=78.6, Expect=2e-18]} {Dmel: FBgn0016120, ATPsynD, ATP synthase, subunit D, [RH, Score=92.0, Expect=2e-23]} {Celegans: WBGene00007385, atp-5, ATP synthase subunit, [RH, Score=67.0, Expect=5e-14]} {Smed: dd_Smed_v6_1461_0_1, dd_Smed_v6_1461_0_1, [RH, Score=103, Expect=2e-28]} {RNA1509_1288, RNA1509_2744, RNA1509_2861, RNA1509_9518} {RNA1310_26299.1, RNA1509_1288, RNA1509_2744, RNA1509_2861, RNA1509_9518} {RNA1509_1288, RNA1509_2744, RNA1509_2861, RNA1509_9518, RNA815_15455}

Cumulative graph for MligTC455_22991

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.109 8.418 0.70003 1.00000
RegionR2 -0.419 8.418 0.04003 0.23226
RegionR3 0.117 8.418 0.50023 0.99478
RegionR4 0.729 8.418 0.00014 0.00208
RegionR5 0.429 8.418 0.00943 0.05532
RegionR6 0.191 8.418 0.27219 0.86118
RegionR7 -0.047 8.418 0.79941 1.00000
RegionR8 -0.89 8.418 0.00008 0.00731

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.345 8.418 0.00067 0.14962
RegenerationR2 -0.114 8.418 0.59803 0.91508
RegenerationR3 -0.097 8.418 0.66167 0.93383
RegenerationR4 0.053 8.418 0.81295 0.99046
RegenerationR5 0.153 8.418 0.48318 0.84788
RegenerationR6 0.116 8.418 0.60066 0.86904
RegenerationBL 0.473 8.418 0.01584 0.13298
RegenerationTP -0.011 8.418 0.96135 1.00000


Genes with expression patterns similar to MligTC455_22991

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22991 15745 328.01 Mlig455_046872

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.284

ATP5PD 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_046872 {REF} {Length: 1034} {TRANSSPLICED} {Pfam: ATP synthase D chain, mitochondrial (ATP5H) [PF05873.14, score=115.2]} {Human: ENSG00000167863, ATP5PD, ATP synthase peripheral stalk subunit d, [RH, Score=74.3, Expect=1e-16]} {Mouse: ENSMUSG00000034566, Atp5h, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D, [RH, Score=78.6, Expect=2e-18]} {Dmel: FBgn0016120, ATPsynD, ATP synthase, subunit D, [RH, Score=92.0, Expect=2e-23]} {Celegans: WBGene00007385, atp-5, ATP synthase subunit, [RH, Score=67.0, Expect=5e-14]} {Smed: dd_Smed_v6_1461_0_1, dd_Smed_v6_1461_0_1, [RH, Score=103, Expect=2e-28]} {RNA1509_1288, RNA1509_2744, RNA1509_2861, RNA1509_9518} {RNA1310_26299.1, RNA1509_1288, RNA1509_2744, RNA1509_2861, RNA1509_9518} {RNA1509_1288, RNA1509_2744, RNA1509_2861, RNA1509_9518, RNA815_15455}
2. MligTC455_33113 7182 149.63 Mlig455_056314

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.405

POMP 0.963 - - - - - 0.963 Mlig455_056314 {REF} {Length: 704} {TRANSSPLICED} {Pfam: Proteasome maturation factor UMP1 [PF05348.13, score=75.3]} {Human: ENSG00000132963, POMP, proteasome maturation protein, [RH, Score=90.9, Expect=9e-24]} {Mouse: ENSMUSG00000029649, Pomp, proteasome maturation protein, [RH, Score=90.1, Expect=1e-23]} {Dmel: FBgn0032884, Pomp, [RH, Score=77.4, Expect=7e-19]} {RNA1509_949} {RNA1310_48599, RNA1509_949} {RNA1509_949, RNA815_25766}
3. MligTC455_46002 717 14.94 Mlig455_051100

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.188/0.00025

0.963 - - - 0.963 - - Mlig455_051100 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=28.0]} {RNA1509_25661, RNA1509_32445, RNA1509_50336} {RNA1310_38539.1, RNA1509_25661, RNA1509_32445, RNA1509_50336} {RNA1509_25661, RNA1509_32445, RNA1509_50336, RNA815_41179}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA