TomoSeq data search

Data search

Results for MligTC455_23058

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23058

105

2.18

Mlig455_037126

Neo: -

Age: Down-Up-Down

PMVK

Mlig455_037126 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Phosphomevalonate kinase [PF04275.16, score=124.5]} {Human: ENSG00000163344, PMVK, phosphomevalonate kinase, [RH, Score=159, Expect=3e-49]} {Mouse: ENSMUSG00000027952, Pmvk, phosphomevalonate kinase, [RH, Score=168, Expect=1e-52]} {Dmel: FBgn0032811, CG10268, [RH, Score=132, Expect=7e-39]} {Celegans: WBGene00009335, F32D8.13, [RH, Score=128, Expect=1e-37]} {Smed: dd_Smed_v6_10636_0_1, dd_Smed_v6_10636_0_1, [RH, Score=113, Expect=1e-31]} {RNA1509_44443} {RNA1310_5770} {RNA815_27170}

Cumulative graph for MligTC455_23058

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.534	2.034	0.12863	0.72620
RegionR2	1.788	2.034	0.16580	0.50964
RegionR3	1.547	2.034	0.08355	0.51147
RegionR4	-0.446	2.034	0.96074	1.00000
RegionR5	0.339	2.034	0.73721	1.00000
RegionR6	1.272	2.034	0.21849	0.79826
RegionR7	0.706	2.034	0.56863	1.00000
RegionR8	1.327	2.034	0.36435	0.99861

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.917	2.034	0.99974	1.00000
RegenerationR2	1.155	2.034	0.25383	0.70022
RegenerationR3	1.372	2.034	0.11900	0.53692
RegenerationR4	1.506	2.034	0.13116	0.54746
RegenerationR5	0.837	2.034	0.28322	0.71189
RegenerationR6	2.075	2.034	0.02886	0.21181
RegenerationBL	1.667	2.034	0.26443	0.62285
RegenerationTP	-3.121	2.034	0.21491	0.65760

Genes with expression patterns similar to MligTC455_23058

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23058	105	2.18	Mlig455_037126	Neo: - Age: Down-Up-Down	PMVK	4	1.000	1.000	-	-	1.000	1.000	Mlig455_037126 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Phosphomevalonate kinase [PF04275.16, score=124.5]} {Human: ENSG00000163344, PMVK, phosphomevalonate kinase, [RH, Score=159, Expect=3e-49]} {Mouse: ENSMUSG00000027952, Pmvk, phosphomevalonate kinase, [RH, Score=168, Expect=1e-52]} {Dmel: FBgn0032811, CG10268, [RH, Score=132, Expect=7e-39]} {Celegans: WBGene00009335, F32D8.13, [RH, Score=128, Expect=1e-37]} {Smed: dd_Smed_v6_10636_0_1, dd_Smed_v6_10636_0_1, [RH, Score=113, Expect=1e-31]} {RNA1509_44443} {RNA1310_5770} {RNA815_27170}
2.	MligTC455_23059	131	2.74	Mlig455_038521	Neo: - Age: Down-Down-Up	SIRT6	2.713	0.967	0.866	-	-	-	0.880	Mlig455_038521 {REF} {Length: 9131} {Pfam: Phosphomevalonate kinase [PF04275.16, score=119.7]; Sir2 family [PF02146.19, score=73.4]; SET domain [PF00856.30, score=62.0]} {Human: ENSG00000077463, SIRT6, sirtuin 6, [Score=252, Expect=5e-74]} {Mouse: ENSMUSG00000034748, Sirt6, sirtuin 6, [Score=254, Expect=5e-75]} {Dmel: FBgn0037802, Sirt6, Sirtuin 6, [RH, Score=260, Expect=2e-77]} {Celegans: WBGene00004803, sir-2.4, NAD-dependent protein deacetylase sir-2.4, [RH, Score=174, Expect=3e-48]} {Smed: dd_Smed_v6_10564_0_1, dd_Smed_v6_10564_0_1, [Score=264, Expect=3e-79]} {RNA1509_37070, RNA1509_44443} {RNA1310_7690, RNA1509_44443} {RNA1509_44443, RNA815_6328}
3.	MligTC455_29902	134	2.79	Mlig455_036021	Neo: - Age: Down-Up-Up	MAP3K4	0.97	-	-	-	-	-	0.970	Mlig455_036021 {REF} {Length: 1657} {Pfam: Protein kinase domain [PF00069.27, score=164.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.0]; Fungal protein kinase [PF17667.3, score=29.9]; Phosphotransferase enzyme family [PF01636.25, score=20.6]; ABC1 atypical kinase-like domain [PF03109.18, score=20.2]; Kinase-like [PF14531.8, score=18.2]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=130, Expect=1e-32]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=126, Expect=3e-31]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=125, Expect=7e-31]; ENSMUSG00000071369, Map3k5, mitogen-activated protein kinase kinase kinase 5, [Score=122, Expect=5e-30]; ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=122, Expect=5e-30]} {Dmel: FBgn0024329, Mekk1, [Score=127, Expect=7e-32]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=135, Expect=8e-35]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=113, Expect=4e-27]} {RNA1509_43621} {RNA1310_32013} {RNA815_6977.1}
4.	MligTC455_46420	33	0.7	Mlig455_008464	Neo: - Age: logFC(26M/2M)=7.397	ZNF358	0.953	-	-	-	-	-	0.953	Mlig455_008464 {REF} {Length: 3570} {Pfam: C2H2-type zinc finger [PF13894.8, score=71.8]; Zinc finger, C2H2 type [PF00096.28, score=55.8]; Zinc-finger double domain [PF13465.8, score=34.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=25.7]} {Human: ENSG00000198816, ZNF358, zinc finger protein 358, [Score=105, Expect=1e-22]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=99.8, Expect=1e-20]} {Mouse: ENSMUSG00000075040, Zfp408, zinc finger protein 408, [Score=107, Expect=2e-23]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=104, Expect=2e-22]; ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=103, Expect=6e-22]} {Dmel: FBgn0020309, crol, crooked legs, [Score=104, Expect=2e-22]} {Celegans: WBGene00019751, M03D4.4, [Score=72.8, Expect=5e-13]} {Smed: dd_Smed_v6_9443_0_1, dd_Smed_v6_9443_0_1, [RH, Score=119, Expect=5e-27]} {RNA1509_12398} {RNA1310_10410} {RNA815_9727}
5.	MligTC455_18527	360	7.5	Mlig455_012969, Mlig455_028760, Mlig455_033181, Mlig455_046334	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_012969 {REF} {Length: 8607} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504} Mlig455_028760 {REF} {Length: 4445} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504} Mlig455_033181 {REF} {Length: 5163} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504} Mlig455_046334 {REF} {Length: 4445} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504}
6.	MligTC455_52524	30	0.63	Mlig455_059749	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_059749 {REF} {Length: 2336} {RNA1509_39451} {RNA1310_39324} {RNA815_6430}

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