M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_52524

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52524 30 0.63 Mlig455_059749

Neo: -

Age: -

 Mlig455_059749 {REF} {Length: 2336} {RNA1509_39451} {RNA1310_39324} {RNA815_6430}

Cumulative graph for MligTC455_52524

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.156 0.89 0.99993 1.00000
RegionR2 0.594 0.89 0.70957 1.00000
RegionR3 -1.261 0.89 1.00000 1.00000
RegionR4 2.206 0.89 0.31129 0.62634
RegionR5 3.746 0.89 0.03359 0.14063
RegionR6 0.608 0.89 0.58196 1.00000
RegionR7 -2.479 0.89 1.00000 1.00000
RegionR8 0.741 0.89 0.67640 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.739 0.89 1.00000 1.00000
RegenerationR2 0.381 0.89 0.99071 1.00000
RegenerationR3 2.739 0.89 0.31002 0.74062
RegenerationR4 0.939 0.89 0.95073 1.00000
RegenerationR5 -0.921 0.89 0.59155 0.90633
RegenerationR6 1.906 0.89 0.73297 0.94258
RegenerationBL -2.279 0.89 1.00000 1.00000
RegenerationTP 1.793 0.89 0.63790 0.98229


Genes with expression patterns similar to MligTC455_52524

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52524 30 0.63 Mlig455_059749

Neo: -

Age: -

 3 - - 1.000 1.000 - 1.000 Mlig455_059749 {REF} {Length: 2336} {RNA1509_39451} {RNA1310_39324} {RNA815_6430}
2. MligTC455_32629 521 10.85 Mlig455_009122, Mlig455_011103, Mlig455_058072

Neo: -

Age: -

 NDUFAF1 1.721 - - - 0.971 - 0.750

Mlig455_009122 {REF} {Length: 2161} {Pfam: Complex I intermediate-associated protein 30 (CIA30) [PF08547.14, score=77.9]} {Human: ENSG00000137806, NDUFAF1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=103, Expect=6e-25]} {Mouse: ENSMUSG00000027305, Ndufaf1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=97.1, Expect=1e-22]} {Dmel: FBgn0039689, CIA30, Complex I intermediate-associated protein, 30 kDa, [RH, Score=132, Expect=3e-36]} {Celegans: WBGene00008225, nuaf-1, Probable complex I intermediate-associated protein 30, mitochondrial, [RH, Score=123, Expect=1e-32]} {Smed: dd_Smed_v6_8887_0_1, dd_Smed_v6_8887_0_1, [RH, Score=140, Expect=1e-39]} {RNA1509_22274} {RNA1310_27131} {RNA815_11850}

Mlig455_011103 {REF} {Length: 1678} {TRANSSPLICED} {Pfam: Complex I intermediate-associated protein 30 (CIA30) [PF08547.14, score=77.2]} {Human: ENSG00000137806, NDUFAF1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=103, Expect=2e-24]} {Mouse: ENSMUSG00000027305, Ndufaf1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=96.3, Expect=3e-22]} {Dmel: FBgn0039689, CIA30, Complex I intermediate-associated protein, 30 kDa, [RH, Score=133, Expect=4e-36]} {Celegans: WBGene00008225, nuaf-1, Probable complex I intermediate-associated protein 30, mitochondrial, [RH, Score=123, Expect=3e-32]} {Smed: dd_Smed_v6_8887_0_1, dd_Smed_v6_8887_0_1, [RH, Score=140, Expect=5e-39]} {RNA1509_22274} {RNA1310_27131} {RNA815_11850}

Mlig455_058072 {REF} {Length: 1678} {TRANSSPLICED} {Pfam: Complex I intermediate-associated protein 30 (CIA30) [PF08547.14, score=77.2]} {Human: ENSG00000137806, NDUFAF1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=103, Expect=2e-24]} {Mouse: ENSMUSG00000027305, Ndufaf1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=96.3, Expect=3e-22]} {Dmel: FBgn0039689, CIA30, Complex I intermediate-associated protein, 30 kDa, [RH, Score=133, Expect=4e-36]} {Celegans: WBGene00008225, nuaf-1, Probable complex I intermediate-associated protein 30, mitochondrial, [RH, Score=123, Expect=3e-32]} {Smed: dd_Smed_v6_8887_0_1, dd_Smed_v6_8887_0_1, [RH, Score=140, Expect=5e-39]} {RNA1509_22274, RNA1509_36771} {RNA1310_27131, RNA1509_36771} {RNA1509_36771, RNA815_11850}
3. MligTC455_23886 23 0.47 Mlig455_029403

Neo: -

Age: Down-Up-Down

 1.709 - - - 0.957 - 0.752 Mlig455_029403 {REF} {Length: 1827} {Pfam: Caspase domain [PF00656.24, score=47.0]} {RNA1310_26000} {RNA815_31431}
4. MligTC455_12497 43 0.89 Mlig455_002792

Neo: -

Age: -

Region-enriched R5: 4.399/0.00278

 1 - - 1.000 - - - Mlig455_002792 {REF} {Length: 2465} {NoTransDecoderORF} {RNA1509_51543} {RNA1310_51271} {RNA815_35314}
5. MligTC455_20272 92 1.92 Mlig455_026087

Neo: -

Age: Down-Up-Down

 1 - - 1.000 - - - Mlig455_026087 {REF} {Length: 2788} {TRANSSPLICED} {RNA1509_16686, RNA1509_45662} {RNA1310_16986, RNA1509_45662} {RNA1509_45662, RNA815_5991}
6. MligTC455_11309 35 0.73 Mlig455_031805

Neo: -

Age: -

 0.997 - - 0.997 - - - Mlig455_031805 {REF} {Length: 2416} {RNA1509_35450} {RNA1310_38823} {RNA815_30372}
7. MligTC455_26583 12 0.25 Mlig455_018637, Mlig455_018825, Mlig455_018826

Neo: -

Age: -

 0.993 - - 0.993 - - -

Mlig455_018637 {REF} {Length: 2077} {RNA1509_35604} {RNA1310_38733.1} {RNA815_38454}

Mlig455_018825 {REF} {Length: 1387} {RNA1310_38733.1} {RNA815_38454}

Mlig455_018826 {REF} {Length: 2190} {RNA1509_29984} {RNA1310_8204} {RNA815_25154}
8. MligTC455_33172 36 0.76 Mlig455_048552, Mlig455_053340

Neo: -

Age: -

 0.985 - - - 0.985 - -

Mlig455_048552 {REF} {Length: 1151} {NoTransDecoderORF} {RNA1509_39047} {RNA1310_37860} {RNA815_57966}

Mlig455_053340 {REF} {Length: 1990} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42625} {RNA1310_37926} {RNA815_32504}
9. MligTC455_10209 16 0.33 Mlig455_030396

Neo: -

Age: -

 0.977 - - 0.977 - - - Mlig455_030396 {REF} {Length: 384} {NoTransDecoderORF} {RNA1310_100530} {RNA815_35995.2}
10. MligTC455_14225 11 0.24 Mlig455_039259

Neo: -

Age: -

 0.977 - - 0.977 - - - Mlig455_039259 {REF} {Length: 586} {NoTransDecoderORF} {RNA1310_15486.3} {RNA815_50838}
11. MligTC455_16584 14 0.29 Mlig455_053386

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.479

 0.977 - - 0.977 - - - Mlig455_053386 {REF} {Length: 78} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35699} {RNA1310_3782.2} {RNA815_22050}
12. MligTC455_23460 40 0.83 Mlig455_008456, Mlig455_008497, Mlig455_008498, Mlig455_015305

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.544

 HLF 0.977 - - 0.977 - - -

Mlig455_008456 {REF} {Length: 2202} {Pfam: Basic region leucine zipper [PF07716.17, score=48.4]; bZIP transcription factor [PF00170.23, score=23.8]} {Human: ENSG00000108924, HLF, HLF, PAR bZIP transcription factor, [RH, Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000003949, Hlf, hepatic leukemia factor, [RH, Score=85.5, Expect=1e-18]} {Dmel: FBgn0034096, CG7786, [Score=95.9, Expect=2e-23]} {Celegans: WBGene00000469, ces-2, Cell death specification protein 2, [RH, Score=77.8, Expect=9e-17]} {Smed: dd_Smed_v6_14028_0_1, dd_Smed_v6_14028_0_1, [RH, Score=70.9, Expect=9e-15]} {RNA1509_55988} {RNA1310_15764.1} {RNA815_6404.1}

Mlig455_008497 {REF} {Length: 274} {NoTransDecoderORF}

Mlig455_008498 {REF} {Length: 2707} {Pfam: Basic region leucine zipper [PF07716.17, score=48.4]; bZIP transcription factor [PF00170.23, score=23.8]} {Human: ENSG00000108924, HLF, HLF, PAR bZIP transcription factor, [RH, Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000003949, Hlf, hepatic leukemia factor, [RH, Score=85.5, Expect=1e-18]} {Dmel: FBgn0034096, CG7786, [Score=95.9, Expect=2e-23]} {Celegans: WBGene00000469, ces-2, Cell death specification protein 2, [RH, Score=77.8, Expect=9e-17]} {Smed: dd_Smed_v6_14028_0_1, dd_Smed_v6_14028_0_1, [RH, Score=70.9, Expect=9e-15]} {RNA1509_55988} {RNA1310_15764.1} {RNA815_6404.1}

Mlig455_015305 {REF} {Length: 3704} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.3]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=175, Expect=8e-46]} {RNA1310_27350} {RNA815_49943}
13. MligTC455_38881 40 0.84 Mlig455_012081

Neo: -

Age: -

 0.975 - - - 0.975 - - Mlig455_012081 {REF} {Length: 446} {NoTransDecoderORF} {RNA1310_49929.1} {RNA815_64667}
14. MligTC455_12151 45 0.93 Mlig455_008852

Neo: -

Age: -

 0.973 - - - 0.973 - - Mlig455_008852 {REF} {Length: 1057} {RNA1509_33014} {RNA1310_11113, RNA1509_33014} {RNA1509_33014, RNA815_40402.2}
15. MligTC455_28354 271 5.64 Mlig455_004294

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_004294 {REF} {Length: 1225} {RNA1509_34039} {RNA1310_34592, RNA1509_34039} {RNA1509_34039, RNA815_39126}
16. MligTC455_25345 16 0.33 Mlig455_067595

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.519

 0.97 - - 0.970 - - - Mlig455_067595 {REF} {Length: 3236} {TRANSSPLICED} {Celegans: WBGene00013762, Y113G7B.12, [Score=53.9, Expect=5e-07]} {RNA1509_54202} {RNA1310_5109} {RNA815_16616}
17. MligTC455_28277 222 4.62 Mlig455_007353

Neo: Germline

Age: -

Region-enriched R7: 2.476/0.01260
Region-enriched R4: 2.204/0.02843

 0.969 - - - 0.969 - - Mlig455_007353 {REF} {Length: 725} {TRANSSPLICED} {RNA1509_55752} {RNA1310_1210} {RNA815_22413}
18. MligTC455_09443 3 0.07 Mlig455_065752

Neo: -

Age: -

 GABBR2 0.964 - - 0.964 - - - Mlig455_065752 {REF} {Length: 2372} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=148.9]; Receptor family ligand binding region [PF01094.30, score=89.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=274, Expect=3e-80]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=270, Expect=1e-78]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=218, Expect=7e-60]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=208, Expect=2e-57]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=128, Expect=8e-31]} {RNA1509_31030} {RNA1310_86261}
19. MligTC455_16621 49 1.02 Mlig455_020457

Neo: -

Age: Up-Down-Up

 0.961 - - - 0.961 - - Mlig455_020457 {REF} {Length: 2984} {Pfam: Papain family cysteine protease [PF00112.25, score=19.4]} {RNA1509_11606} {RNA1310_6063.3} {RNA815_1093}
20. MligTC455_07486 42 0.87 Mlig455_006844, Mlig455_036073, Mlig455_055146

Neo: -

Age: -

 0.958 - - - - - 0.958

Mlig455_006844 {REF} {Length: 299} {NoTransDecoderORF} {RNA1509_31318} {RNA1310_37189} {RNA815_39211}

Mlig455_036073 {REF} {Length: 1042} {RNA1509_18639} {RNA1310_42584} {RNA815_39211}

Mlig455_055146 {REF} {Length: 262} {NoTransDecoderORF} {RNA1509_31318} {RNA1310_95538.1} {RNA815_39211}
21. MligTC455_46420 33 0.7 Mlig455_008464

Neo: -

Age: logFC(26M/2M)=7.397

 ZNF358 0.958 - - - - - 0.958 Mlig455_008464 {REF} {Length: 3570} {Pfam: C2H2-type zinc finger [PF13894.8, score=71.8]; Zinc finger, C2H2 type [PF00096.28, score=55.8]; Zinc-finger double domain [PF13465.8, score=34.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=25.7]} {Human: ENSG00000198816, ZNF358, zinc finger protein 358, [Score=105, Expect=1e-22]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=99.8, Expect=1e-20]} {Mouse: ENSMUSG00000075040, Zfp408, zinc finger protein 408, [Score=107, Expect=2e-23]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=104, Expect=2e-22]; ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=103, Expect=6e-22]} {Dmel: FBgn0020309, crol, crooked legs, [Score=104, Expect=2e-22]} {Celegans: WBGene00019751, M03D4.4, [Score=72.8, Expect=5e-13]} {Smed: dd_Smed_v6_9443_0_1, dd_Smed_v6_9443_0_1, [RH, Score=119, Expect=5e-27]} {RNA1509_12398} {RNA1310_10410} {RNA815_9727}
22. MligTC455_12863 41 0.85 Mlig455_004293

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_004293 {REF} {Length: 2112} {Pfam: Immunoglobulin domain [PF13927.8, score=26.8]; Immunoglobulin domain [PF13895.8, score=23.4]} {RNA1509_37987} {RNA1310_55399} {RNA815_29559}
23. MligTC455_23946 219 4.57 Mlig455_044344

Neo: -

Age: -

Region-enriched R8: 3.871/0.00002
Region-enriched R7: 3.585/0.00000

Regeneration-downregulated BL: -7.362

Regeneration-depleted BL: -7.362

 0.955 - - - 0.955 - - Mlig455_044344 {REF} {Length: 1011} {RNA1509_17939} {RNA1310_36650.1} {RNA815_9418.1}
24. MligTC455_28507 172 3.59 Mlig455_024585

Neo: -

Age: logFC(26M/2M)=0.581

 MMEL1 0.955 - - - 0.955 - - Mlig455_024585 {REF} {Length: 3830} {Pfam: Peptidase family M13 [PF05649.15, score=170.2]; Peptidase family M13 [PF01431.23, score=90.0]} {Human: ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=193, Expect=5e-51]; ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=193, Expect=5e-51]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=190, Expect=9e-50]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=190, Expect=2e-50]} {Mouse: ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=192, Expect=3e-51]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=192, Expect=1e-50]; ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=189, Expect=7e-50]; ENSMUSG00000057530, Ece1, endothelin converting enzyme 1, [Score=183, Expect=5e-48]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=192, Expect=4e-51]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=168, Expect=3e-43]} {Smed: dd_Smed_v6_1910_0_1, dd_Smed_v6_1910_0_1, [Score=159, Expect=2e-40]} {RNA1509_8085} {RNA1310_3632} {RNA815_1118}
25. MligTC455_06769 20 0.41 Mlig455_006809

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.534

 MGLL 0.954 - - - - - 0.954 Mlig455_006809 {REF} {Length: 2329} {TRANSSPLICED} {Pfam: Serine aminopeptidase, S33 [PF12146.10, score=191.6]; Alpha/beta hydrolase family [PF12697.9, score=47.8]; alpha/beta hydrolase fold [PF00561.22, score=41.3]; Prolyl oligopeptidase family [PF00326.23, score=33.5]; Putative esterase [PF00756.22, score=31.3]; Thioesterase domain [PF00975.22, score=25.4]; Lipase (class 3) [PF01764.27, score=19.6]} {Human: ENSG00000074416, MGLL, monoglyceride lipase, [Score=129, Expect=5e-35]} {Mouse: ENSMUSG00000033174, Mgll, monoglyceride lipase, [Score=128, Expect=1e-34]} {Smed: dd_Smed_v6_10155_0_1, dd_Smed_v6_10155_0_1, [RH, Score=122, Expect=5e-33]} {RNA1509_17001, RNA1509_55402} {RNA1310_32691, RNA1509_17001, RNA1509_55402} {RNA1509_17001, RNA1509_55402, RNA815_14060.1}
26. MligTC455_14414 500 10.42 Mlig455_065956

Neo: -

Age: logFC(26M/2M)=2.723

 SPDEF 0.954 - - - 0.954 - - Mlig455_065956 {REF} {Length: 1405} {Pfam: Ets-domain [PF00178.24, score=67.5]} {Human: ENSG00000124664, SPDEF, SAM pointed domain containing ETS transcription factor, [Score=60.5, Expect=1e-09]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=59.7, Expect=1e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=70.1, Expect=6e-13]} {Celegans: WBGene00017687, ets-4, Transcription factor ets-4, [Score=60.5, Expect=5e-10]} {Smed: dd_Smed_v6_6015_0_1, dd_Smed_v6_6015_0_1, [Score=73.6, Expect=2e-14]} {RNA1509_24111} {RNA1310_27105} {RNA815_11814.1}
27. MligTC455_28355 294 6.12 Mlig455_004369

Neo: -

Age: Up-Down-Up

 0.954 - - - - - 0.954 Mlig455_004369 {REF} {Length: 4652} {TRANSSPLICED} {Pfam: Wolframin cysteine-rich domain [PF20053.1, score=73.1]; Wolframin C-terminal OB-fold domain [PF19913.1, score=32.7]} {RNA1509_20192} {RNA1310_15643, RNA1509_20192} {RNA1509_20192, RNA815_12266}
28. MligTC455_24334 77 1.59 Mlig455_069413

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 2.672/0.01641

 0.953 - - - 0.953 - - Mlig455_069413 {REF} {Length: 2674} {Smed: dd_Smed_v6_20221_0_2, dd_Smed_v6_20221_0_2, [RH, Score=62.8, Expect=1e-10]} {RNA1509_44068} {RNA1310_9316} {RNA815_2582.1}
29. MligTC455_15128 67 1.4 Mlig455_064868

Neo: -

Age: -

 DMRTA2 0.952 - - - 0.952 - - Mlig455_064868 {REF} {Length: 2478} {Pfam: DM DNA binding domain [PF00751.20, score=96.6]; Anti-sigma-K factor rskA [PF10099.11, score=29.6]} {Human: ENSG00000142700, DMRTA2, DMRT like family A2, [Score=60.8, Expect=3e-09]} {Mouse: ENSMUSG00000047143, Dmrta2, doublesex and mab-3 related transcription factor like family A2, [Score=59.7, Expect=4e-09]} {Dmel: FBgn0030477, dmrt11E, doublesex-Mab related 11E, [Score=58.2, Expect=6e-09]} {Celegans: WBGene00007776, dmd-4, DM (Doublesex/MAB-3) Domain family, [Score=64.7, Expect=2e-11]} {Smed: dd_Smed_v6_14213_0_2, dd_Smed_v6_14213_0_2, [Score=124, Expect=3e-31]} {RNA1310_36075.1} {RNA815_48888}
30. MligTC455_19756 58 1.21 Mlig455_025331

Neo: -

Age: logFC(26M/2M)=0.196

 0.952 - - - - - 0.952 Mlig455_025331 {REF} {Length: 10472} {Pfam: Immunoglobulin domain [PF13895.8, score=27.5]; Immunoglobulin domain [PF13927.8, score=27.3]} {RNA1509_26290, RNA1509_28638, RNA1509_3949, RNA1509_53842} {RNA1310_5716.1, RNA1509_26290, RNA1509_28638, RNA1509_3949, RNA1509_53842} {RNA1509_26290, RNA1509_28638, RNA1509_3949, RNA1509_53842, RNA815_5937}
31. MligTC455_36793 457 9.52 Mlig455_006203, Mlig455_059291, Mlig455_065204

Neo: Germline

Age: -

Region-specific R4: 5.200

Region-enriched R4: 3.376/0.02142

 PRR9 0.951 - - - 0.951 - -

Mlig455_006203 {REF} {Length: 1777} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.9]; Integrase core domain [PF00665.28, score=36.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.4, Expect=1e-11]} {RNA1509_57967} {RNA1310_55181.1} {RNA815_36039}

Mlig455_059291 {REF} {Length: 545} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.9]; Integrase core domain [PF00665.28, score=36.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.4, Expect=1e-11]} {RNA1509_57967} {RNA1310_55181.1} {RNA815_36039}

Mlig455_065204 {REF} {Length: 2877} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.4, Expect=3e-06]} {RNA1509_57967} {RNA1310_45832, RNA1509_57967} {RNA1509_57967, RNA815_34745}
32. MligTC455_13302 51 1.06 Mlig455_018961, Mlig455_057942

Neo: -

Age: -

 0.95 - - - 0.950 - -

Mlig455_018961 {REF} {Length: 7277} {Pfam: Retrotransposon gag protein [PF03732.19, score=22.2]} {RNA1509_16532} {RNA1310_1043} {RNA815_6984}

Mlig455_057942 {REF} {Length: 7519} {Pfam: TatD related DNase [PF01026.23, score=22.3]} {RNA1509_16532, RNA1509_25433} {RNA1310_1043, RNA1509_25433} {RNA1509_25433, RNA815_6984}
33. MligTC455_23058 105 2.18 Mlig455_037126

Neo: -

Age: Down-Up-Down

 PMVK 0.95 - - - - - 0.950 Mlig455_037126 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Phosphomevalonate kinase [PF04275.16, score=124.5]} {Human: ENSG00000163344, PMVK, phosphomevalonate kinase, [RH, Score=159, Expect=3e-49]} {Mouse: ENSMUSG00000027952, Pmvk, phosphomevalonate kinase, [RH, Score=168, Expect=1e-52]} {Dmel: FBgn0032811, CG10268, [RH, Score=132, Expect=7e-39]} {Celegans: WBGene00009335, F32D8.13, [RH, Score=128, Expect=1e-37]} {Smed: dd_Smed_v6_10636_0_1, dd_Smed_v6_10636_0_1, [RH, Score=113, Expect=1e-31]} {RNA1509_44443} {RNA1310_5770} {RNA815_27170}
34. MligTC455_41952 2063 42.98 Mlig455_028450

Neo: Germline

Age: -

Region-enriched R7: 5.688/0.00000
Region-enriched R8: 5.090/0.00000

 0.95 - - - 0.950 - - Mlig455_028450 {REF} {Length: 1688} {RNA1509_36146} {RNA1310_85221} {RNA815_43342}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA