Data search
Results for MligTC455_23112
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23112 | 2075 | 43.23 | Mlig455_027165 | Neo: - Age: - |
EIF4G3 | Mlig455_027165 {REF} {Length: 6148} {Pfam: MIF4G domain [PF02854.21, score=101.5]; MA3 domain [PF02847.19, score=22.9]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=303, Expect=3e-83]; ENSG00000114867, EIF4G1, eukaryotic translation initiation factor 4 gamma 1, [Score=292, Expect=1e-79]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=311, Expect=7e-86]} {Dmel: FBgn0023213, eIF4G1, eukaryotic translation initiation factor 4G1, [RH, Score=160, Expect=6e-39]} {Smed: dd_Smed_v6_10618_0_1, dd_Smed_v6_10618_0_1, [Score=209, Expect=2e-59]} {RNA1509_5307} {RNA1310_788.1} {RNA815_583} |
Cumulative graph for MligTC455_23112
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.954 | 5.594 | 0.13251 | 0.73161 | |
| RegionR2 | -1.108 | 5.594 | 0.00015 | 0.00552 | |
| RegionR3 | -0.17 | 5.594 | 0.45822 | 0.96823 | |
| RegionR4 | 0.875 | 5.594 | 0.00125 | 0.01238 | |
| RegionR5 | 0.672 | 5.594 | 0.00080 | 0.00859 | |
| RegionR6 | -0.192 | 5.594 | 0.41863 | 0.98648 | |
| RegionR7 | -0.219 | 5.594 | 0.49292 | 1.00000 | |
| RegionR8 | -0.812 | 5.594 | 0.07647 | 0.52697 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.467 | 5.594 | 0.54945 | 1.00000 | |
| RegenerationR2 | 0.653 | 5.594 | 0.00784 | 0.14111 | |
| RegenerationR3 | 0.358 | 5.594 | 0.16102 | 0.59443 | |
| RegenerationR4 | -0.038 | 5.594 | 0.88015 | 1.00000 | |
| RegenerationR5 | -0.103 | 5.594 | 0.65170 | 0.93304 | |
| RegenerationR6 | 0.977 | 5.594 | 0.00010 | 0.00911 | |
| RegenerationBL | 0.466 | 5.594 | 0.15062 | 0.46372 | |
| RegenerationTP | 0.144 | 5.594 | 0.70519 | 1.00000 |
Genes with expression patterns similar to MligTC455_23112
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23112 | 2075 | 43.23 | Mlig455_027165 | Neo: - Age: - |
EIF4G3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027165 {REF} {Length: 6148} {Pfam: MIF4G domain [PF02854.21, score=101.5]; MA3 domain [PF02847.19, score=22.9]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=303, Expect=3e-83]; ENSG00000114867, EIF4G1, eukaryotic translation initiation factor 4 gamma 1, [Score=292, Expect=1e-79]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=311, Expect=7e-86]} {Dmel: FBgn0023213, eIF4G1, eukaryotic translation initiation factor 4G1, [RH, Score=160, Expect=6e-39]} {Smed: dd_Smed_v6_10618_0_1, dd_Smed_v6_10618_0_1, [Score=209, Expect=2e-59]} {RNA1509_5307} {RNA1310_788.1} {RNA815_583} |
| 2. | MligTC455_23111 | 1282 | 26.7 | Mlig455_015089 | Neo: - Age: Up-Down-Up |
EIF4G3 | 3.294 | - | - | 0.741 | 0.956 | 0.883 | 0.714 | Mlig455_015089 {REF} {Length: 6175} {Pfam: MIF4G domain [PF02854.21, score=100.7]; MA3 domain [PF02847.19, score=22.5]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=301, Expect=4e-82]; ENSG00000114867, EIF4G1, eukaryotic translation initiation factor 4 gamma 1, [Score=292, Expect=2e-79]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=309, Expect=9e-85]} {Dmel: FBgn0023213, eIF4G1, eukaryotic translation initiation factor 4G1, [RH, Score=149, Expect=1e-35]} {Smed: dd_Smed_v6_10618_0_1, dd_Smed_v6_10618_0_1, [Score=210, Expect=2e-59]} {RNA1509_828} {RNA1310_788.1} {RNA815_583} |
| 3. | MligTC455_33055 | 1249 | 26.02 | Mlig455_051118 | Neo: Irradiation Age: Up-Down-Down |
ZFR2 | 1.875 | - | - | 0.965 | 0.910 | - | - | Mlig455_051118 {REF} {Length: 3998} {Pfam: DZF domain [PF07528.16, score=182.4]} {Human: ENSG00000105278, ZFR2, zinc finger RNA binding protein 2, [Score=342, Expect=3e-103]} {Mouse: ENSMUSG00000034949, Zfr2, zinc finger RNA binding protein 2, [RH, Score=346, Expect=2e-105]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [Score=351, Expect=3e-107]} {Celegans: WBGene00022388, Y95B8A.8, [Score=188, Expect=8e-50]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [Score=386, Expect=6e-121]} {RNA1509_14569, RNA1509_18544, RNA1509_29608, RNA1509_31583, RNA1509_32568, RNA1509_34726, RNA1509_40685, RNA1509_44764} {RNA1310_7733.1, RNA1509_14569, RNA1509_18544, RNA1509_29608, RNA1509_31583, RNA1509_32568, RNA1509_34726, RNA1509_40685, RNA1509_44764} {RNA1509_14569, RNA1509_18544, RNA1509_29608, RNA1509_31583, RNA1509_32568, RNA1509_34726, RNA1509_40685, RNA1509_44764, RNA815_8736} |
| 4. | MligTC455_27716 | 2493 | 51.93 | Mlig455_002004, Mlig455_002097, Mlig455_002206 | Neo: Int S/G2/M Age: - |
DDX56 | 1.666 | - | - | - | 0.952 | 0.714 | - | Mlig455_002004 {REF} {Length: 2518} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.6]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=470, Expect=1e-159]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=451, Expect=3e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=360, Expect=4e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=4e-132]} {RNA1509_16619} {RNA1310_7902, RNA1509_16619} {RNA1509_16619, RNA815_1492.1} Mlig455_002097 {REF} {Length: 2699} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.5]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=471, Expect=4e-160]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=450, Expect=5e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=361, Expect=1e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=5e-132]} {RNA1509_10761, RNA1509_32998} {RNA1310_7902, RNA1509_10761, RNA1509_32998} {RNA1509_10761, RNA1509_32998, RNA815_1492.1} Mlig455_002206 {REF} {Length: 2201} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.6]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=470, Expect=1e-159]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=451, Expect=3e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=360, Expect=4e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=4e-132]} {RNA1509_32998} {RNA1310_7902} {RNA815_1492.1} |
| 5. | MligTC455_19808 | 4367 | 90.98 | Mlig455_044395 | Neo: - Age: - |
RAB1A | 0.978 | - | - | - | 0.978 | - | - | Mlig455_044395 {REF} {Length: 1545} {Pfam: Ras family [PF00071.24, score=223.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=128.2]; ADP-ribosylation factor family [PF00025.23, score=62.4]; RsgA GTPase [PF03193.18, score=28.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.1]; 50S ribosome-binding GTPase [PF01926.25, score=23.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]} {Human: ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [RH, Score=345, Expect=4e-122]; ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [RH, Score=341, Expect=7e-121]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [RH, Score=345, Expect=3e-122]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [RH, Score=338, Expect=6e-120]} {Dmel: FBgn0285937, Rab1, [RH, Score=324, Expect=2e-114]} {Celegans: WBGene00004266, rab-1, RAB family, [RH, Score=326, Expect=4e-115]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [RH, Score=334, Expect=2e-118]} {RNA1509_18503, RNA1509_53870, RNA1509_8585, RNA1509_873} {RNA1310_21790, RNA1509_18503, RNA1509_53870, RNA1509_8585, RNA1509_873} {RNA1509_18503, RNA1509_53870, RNA1509_8585, RNA1509_873, RNA815_8267.2} |
| 6. | MligTC455_49683 | 1120 | 23.32 | Mlig455_007183 | Neo: - Age: - |
ECPAS | 0.96 | - | - | - | 0.960 | - | - | Mlig455_007183 {REF} {Length: 5804} {Pfam: Proteasome stabiliser [PF13001.9, score=354.5]; HEAT-like repeat [PF13513.8, score=31.1]; HEAT repeat [PF02985.24, score=23.6]} {Human: ENSG00000136813, ECPAS, Ecm29 proteasome adaptor and scaffold, [RH, Score=629, Expect=0.0]} {Mouse: ENSMUSG00000050812, Ecpas, Ecm29 proteasome adaptor and scaffold, [RH, Score=618, Expect=0.0]} {Dmel: FBgn0033698, CG8858, [RH, Score=315, Expect=2e-86]} {Celegans: WBGene00008422, D2045.2, [RH, Score=156, Expect=9e-38]} {Smed: dd_Smed_v6_5379_0_1, dd_Smed_v6_5379_0_1, [RH, Score=621, Expect=0.0]} {RNA1509_3523} {RNA1310_362.1} {RNA815_2978} |
| 7. | MligTC455_16462 | 248 | 5.17 | Mlig455_058597 | Neo: - Age: Down-Down-Up Region-enriched R4: 2.200/0.02502 |
0.955 | - | - | 0.955 | - | - | - | Mlig455_058597 {REF} {Length: 2499} {RNA1509_26769, RNA1509_36389, RNA1509_43355} {RNA1310_44087, RNA1509_26769, RNA1509_36389, RNA1509_43355} {RNA1509_26769, RNA1509_36389, RNA1509_43355, RNA815_22536} | |
| 8. | MligTC455_20065 | 1482 | 30.87 | Mlig455_000221, Mlig455_058479 | Neo: - Age: Down-Up-Up |
PIGW | 0.952 | - | - | - | 0.952 | - | - | Mlig455_000221 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: GWT1 [PF06423.14, score=72.6]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=100, Expect=1e-21]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=115, Expect=4e-27]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=106, Expect=5e-24]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=120, Expect=6e-29]} {RNA1509_19464, RNA1509_29630} {RNA1310_6153, RNA1509_19464, RNA1509_29630} {RNA1509_19464, RNA1509_29630, RNA815_7740} Mlig455_058479 {REF} {Length: 2310} {Pfam: GWT1 [PF06423.14, score=70.1]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=113, Expect=2e-26]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=102, Expect=6e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=119, Expect=1e-28]} {RNA1509_19464} {RNA1310_6153} {RNA815_7740} |
| 9. | MligTC455_22060 | 414 | 8.63 | Mlig455_070899 | Neo: Irradiation Age: Down-Up-Up |
ZFHX4 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_070899 {REF} {Length: 5905} {Pfam: C2H2 type zinc-finger [PF18414.3, score=27.0]; Zinc-finger of C2H2 type [PF12874.9, score=24.8]; Zinc finger, C2H2 type [PF00096.28, score=23.3]; C2H2-type zinc-finger domain [PF13909.8, score=21.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.4]} {Human: ENSG00000091656, ZFHX4, zinc finger homeobox 4, [RH, Score=202, Expect=2e-51]} {Mouse: ENSMUSG00000025255, Zfhx4, zinc finger homeodomain 4, [RH, Score=201, Expect=2e-51]} {Dmel: FBgn0004607, zfh2, Zn finger homeodomain 2, [RH, Score=164, Expect=2e-40]} {Celegans: WBGene00022518, zfh-2, Zinc Finger and Homeobox, [RH, Score=197, Expect=9e-51]} {Smed: dd_Smed_v6_7033_0_1, dd_Smed_v6_7033_0_1, [Score=139, Expect=4e-33]} {RNA1509_19849} {RNA1310_31042} {RNA815_20239} |
| 10. | MligTC455_45638 | 2531 | 52.72 | Mlig455_029644 | Neo: - Age: Down-Down-Up |
DLG1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_029644 {REF} {Length: 2058} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=201.1]; PDZ domain [PF00595.26, score=68.8]; PDZ domain [PF17820.3, score=26.5]; SH3 domain [PF00018.30, score=26.4]; Variant SH3 domain [PF07653.19, score=24.1]} {Human: ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [RH, Score=516, Expect=2e-174]} {Mouse: ENSMUSG00000022770, Dlg1, discs large MAGUK scaffold protein 1, [RH, Score=513, Expect=7e-173]} {Dmel: FBgn0001624, dlg1, discs large 1, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [Score=385, Expect=2e-123]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [Score=352, Expect=1e-115]} {RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874} {RNA1310_21812.1, RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874} {RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874, RNA815_12065.1} |
| 11. | MligTC455_51363 | 487 | 10.14 | Mlig455_003857 | Neo: - Age: - |
YIPF6 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_003857 {REF} {Length: 784} {TRANSSPLICED} {Pfam: Yip1 domain [PF04893.19, score=40.2]} {Human: ENSG00000181704, YIPF6, Yip1 domain family member 6, [Score=175, Expect=1e-53]} {Mouse: ENSMUSG00000047694, Yipf6, Yip1 domain family, member 6, [Score=170, Expect=8e-52]} {Dmel: FBgn0031600, CG3652, [Score=168, Expect=3e-51]} {Celegans: WBGene00012208, W02D9.2, [Score=137, Expect=4e-39]} {Smed: dd_Smed_v6_2308_0_1, dd_Smed_v6_2308_0_1, [Score=158, Expect=8e-48]} {RNA1509_56683} {RNA1310_31144.1} {RNA815_14036} |
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