TomoSeq data search

Data search

Results for MligTC455_23179

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23179

2632

54.84

Mlig455_003014, Mlig455_003210, Mlig455_003307

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.491/0.00075
Region-enriched R5: 1.006/0.00861

CLPP

Mlig455_003014 {REF} {Length: 886} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=206.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=235, Expect=1e-77]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=237, Expect=1e-78]} {Dmel: FBgn0032229, CG5045, [Score=223, Expect=3e-73]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [Score=195, Expect=4e-63]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [Score=184, Expect=2e-58]} {RNA1509_8834} {RNA1310_37141} {RNA815_17954.1}

Mlig455_003210 {REF} {Length: 942} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=262.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=274, Expect=1e-92]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=279, Expect=1e-94]} {Dmel: FBgn0032229, CG5045, [RH, Score=265, Expect=2e-89]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [RH, Score=233, Expect=2e-77]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [RH, Score=224, Expect=7e-74]} {RNA1509_8834} {RNA1310_37141, RNA1509_8834} {RNA1509_8834, RNA815_17954.1}

Mlig455_003307 {REF} {Length: 938} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=262.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=274, Expect=1e-92]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=279, Expect=1e-94]} {Dmel: FBgn0032229, CG5045, [RH, Score=265, Expect=2e-89]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [RH, Score=233, Expect=2e-77]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [RH, Score=224, Expect=7e-74]} {RNA1509_56270, RNA1509_8834} {RNA1310_37141, RNA1509_56270} {RNA1509_56270, RNA815_17954.1}

Cumulative graph for MligTC455_23179

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.74	5.957	0.29408	0.94550
RegionR2	-0.553	5.957	0.17218	0.51899
RegionR3	0.03	5.957	0.92859	1.00000
RegionR4	1.491	5.957	0.00004	0.00075
RegionR5	1.006	5.957	0.00081	0.00861
RegionR6	0.187	5.957	0.56940	1.00000
RegionR7	-0.717	5.957	0.07331	0.52197
RegionR8	-0.703	5.957	0.14301	0.69068

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.441	5.957	0.21272	0.95131
RegenerationR2	0.003	5.957	0.99471	1.00000
RegenerationR3	0.19	5.957	0.63297	0.92176
RegenerationR4	-0.249	5.957	0.54184	0.88929
RegenerationR5	0.053	5.957	0.88891	1.00000
RegenerationR6	0.438	5.957	0.27239	0.62226
RegenerationBL	0.731	5.957	0.05498	0.27151
RegenerationTP	0.779	5.957	0.07269	0.43187

Genes with expression patterns similar to MligTC455_23179

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23179	2632	54.84	Mlig455_003014, Mlig455_003210, Mlig455_003307	Neo: Int S/G2/M Age: - Region-enriched R4: 1.491/0.00075 Region-enriched R5: 1.006/0.00861	CLPP	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003014 {REF} {Length: 886} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=206.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=235, Expect=1e-77]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=237, Expect=1e-78]} {Dmel: FBgn0032229, CG5045, [Score=223, Expect=3e-73]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [Score=195, Expect=4e-63]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [Score=184, Expect=2e-58]} {RNA1509_8834} {RNA1310_37141} {RNA815_17954.1} Mlig455_003210 {REF} {Length: 942} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=262.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=274, Expect=1e-92]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=279, Expect=1e-94]} {Dmel: FBgn0032229, CG5045, [RH, Score=265, Expect=2e-89]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [RH, Score=233, Expect=2e-77]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [RH, Score=224, Expect=7e-74]} {RNA1509_8834} {RNA1310_37141, RNA1509_8834} {RNA1509_8834, RNA815_17954.1} Mlig455_003307 {REF} {Length: 938} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=262.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=274, Expect=1e-92]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=279, Expect=1e-94]} {Dmel: FBgn0032229, CG5045, [RH, Score=265, Expect=2e-89]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [RH, Score=233, Expect=2e-77]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [RH, Score=224, Expect=7e-74]} {RNA1509_56270, RNA1509_8834} {RNA1310_37141, RNA1509_56270} {RNA1509_56270, RNA815_17954.1}
2.	MligTC455_23178	871	18.15	Mlig455_003219	Neo: - Age: Down-Down-Down Region-enriched R4: 1.649/0.00078	CLPP	5.993	1.000	1.000	0.998	0.999	0.996	1.000	Mlig455_003219 {REF} {Length: 705} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=72.7]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=97.8, Expect=9e-25]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=100, Expect=7e-26]} {Dmel: FBgn0032229, CG5045, [Score=95.5, Expect=2e-24]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [Score=66.2, Expect=6e-14]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [Score=77.8, Expect=4e-18]} {RNA1509_8834} {RNA1310_60933} {RNA815_17954.1}
3.	MligTC455_36646	1840	38.34	Mlig455_012797	Neo: - Age: -	JAGN1	2.571	0.820	-	-	0.956	0.795	-	Mlig455_012797 {REF} {Length: 1099} {TRANSSPLICED} {Pfam: Jagunal, ER re-organisation during oogenesis [PF07086.14, score=52.9]} {Human: ENSG00000171135, JAGN1, jagunal homolog 1, [Score=59.7, Expect=1e-10]} {Mouse: ENSMUSG00000051256, Jagn1, jagunal homolog 1, [Score=59.7, Expect=7e-11]} {Smed: dd_Smed_v6_3028_0_1, dd_Smed_v6_3028_0_1, [Score=46.2, Expect=2e-06]} {RNA1509_24943, RNA1509_38405} {RNA1310_32282.1, RNA1509_38405} {RNA1509_38405, RNA815_15026}
4.	MligTC455_46674	530	11.03	Mlig455_002431	Neo: - Age: Down-Up-Up Region-enriched R5: 1.939/0.00008		2.57	-	-	-	0.957	0.769	0.844	Mlig455_002431 {REF} {Length: 1134} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1279) [PF06916.15, score=45.5]} {Celegans: WBGene00013239, Y56A3A.22, [RH, Score=53.9, Expect=1e-08]} {RNA1509_14675, RNA1509_49434} {RNA1310_26556.2, RNA1509_49434} {RNA1509_49434, RNA815_12953.1}
5.	MligTC455_52382	2028	42.24	Mlig455_014983	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.166	GATD3A	1.81	-	-	-	0.950	0.860	-	Mlig455_014983 {REF} {Length: 1185} {TRANSSPLICED} {Pfam: DJ-1/PfpI family [PF01965.26, score=22.2]} {Human: ENSG00000160221, GATD3A, glutamine amidotransferase like class 1 domain containing 3A, [RH, Score=292, Expect=3e-99]; ENSG00000280071, GATD3B, glutamine amidotransferase like class 1 domain containing 3B, [RH, Score=291, Expect=4e-99]} {Mouse: ENSMUSG00000053329, D10Jhu81e, DNA segment, Chr 10, Johns Hopkins University 81 expressed, [RH, Score=293, Expect=4e-100]} {RNA1509_6713} {RNA1310_30397.1, RNA1509_6713} {RNA1509_6713, RNA815_13674.1}
6.	MligTC455_49445	1942	40.46	Mlig455_044154	Neo: Neoblast Age: - Region-enriched R5: 1.005/0.00062	AK6	1.8	-	-	-	0.963	0.837	-	Mlig455_044154 {REF} {Length: 1086} {TRANSSPLICED} {Pfam: AAA domain [PF13238.8, score=90.3]; AAA domain [PF13521.8, score=27.3]; AAA domain [PF13401.8, score=26.9]; AAA ATPase domain [PF13191.8, score=26.5]; AAA domain [PF13207.8, score=23.7]; RNA helicase [PF00910.24, score=23.3]; AAA domain [PF13671.8, score=22.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.8]; Parvovirus non-structural protein NS1 [PF01057.19, score=20.6]; NTPase [PF03266.17, score=20.6]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=19.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=18.3]} {Human: ENSG00000279247, AK6, adenylate kinase 6, [RH, Score=184, Expect=8e-60]; ENSG00000085231, AK6, adenylate kinase 6, [RH, Score=184, Expect=8e-60]} {Mouse: ENSMUSG00000078941, Ak6, adenylate kinase 6, [RH, Score=192, Expect=5e-63]} {Dmel: FBgn0033754, Ak6, Adenylate kinase 6, [RH, Score=167, Expect=5e-53]} {Celegans: WBGene00008458, E02H1.6, Adenylate kinase isoenzyme 6 homolog, [RH, Score=170, Expect=3e-54]} {Smed: dd_Smed_v6_9332_0_1, dd_Smed_v6_9332_0_1, [RH, Score=184, Expect=3e-60]} {RNA1509_43277} {RNA1310_31173.1, RNA1509_43277} {RNA1509_43277, RNA815_14839}
7.	MligTC455_50675	648	13.5	Mlig455_017899	Neo: - Age: -		1.761	0.808	-	-	-	0.953	-	Mlig455_017899 {REF} {Length: 2179} {RNA1509_14147, RNA1509_51574, RNA1509_53971} {RNA1310_35088, RNA1509_14147, RNA1509_51574, RNA1509_53971} {RNA1509_14147, RNA1509_51574, RNA1509_53971, RNA815_14923}
8.	MligTC455_44876	1992	41.5	Mlig455_053834, Mlig455_068508	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.497/0.00076	POU2F3	1.732	-	-	-	0.963	-	0.769	Mlig455_053834 {REF} {Length: 1684} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=69.1]; Homeodomain [PF00046.31, score=53.2]} {Human: ENSG00000137709, POU2F3, POU class 2 homeobox 3, [Score=100, Expect=1e-22]; ENSG00000143190, POU2F1, POU class 2 homeobox 1, [Score=95.5, Expect=1e-20]; ENSG00000196767, POU3F4, POU class 3 homeobox 4, [Score=95.1, Expect=3e-21]} {Mouse: ENSMUSG00000032015, Pou2f3, POU domain, class 2, transcription factor 3, [Score=101, Expect=3e-23]; ENSMUSG00000026565, Pou2f1, POU domain, class 2, transcription factor 1, [Score=97.4, Expect=2e-21]} {Dmel: FBgn0086680, vvl, ventral veins lacking, [Score=94.7, Expect=4e-21]} {Celegans: WBGene00000441, ceh-18, Homeobox protein ceh-18, [Score=92.0, Expect=4e-20]} {Smed: dd_Smed_v6_17324_0_1, dd_Smed_v6_17324_0_1, [Score=90.9, Expect=2e-20]} {RNA1509_12317, RNA1509_29236, RNA1509_34030} {RNA1310_25748.1, RNA1509_12317, RNA1509_29236, RNA1509_34030} {RNA1509_12317, RNA1509_29236, RNA1509_34030, RNA815_37732} Mlig455_068508 {REF} {Length: 1686} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=69.1]; Homeodomain [PF00046.31, score=53.2]} {Human: ENSG00000137709, POU2F3, POU class 2 homeobox 3, [Score=100, Expect=1e-22]; ENSG00000143190, POU2F1, POU class 2 homeobox 1, [Score=95.5, Expect=1e-20]; ENSG00000196767, POU3F4, POU class 3 homeobox 4, [Score=95.1, Expect=3e-21]} {Mouse: ENSMUSG00000032015, Pou2f3, POU domain, class 2, transcription factor 3, [Score=101, Expect=3e-23]; ENSMUSG00000026565, Pou2f1, POU domain, class 2, transcription factor 1, [Score=97.4, Expect=2e-21]} {Dmel: FBgn0086680, vvl, ventral veins lacking, [Score=94.7, Expect=4e-21]} {Celegans: WBGene00000441, ceh-18, Homeobox protein ceh-18, [Score=92.0, Expect=4e-20]} {Smed: dd_Smed_v6_17324_0_1, dd_Smed_v6_17324_0_1, [Score=90.9, Expect=2e-20]} {RNA1509_12317} {RNA1310_25748.1} {RNA815_37732}
9.	MligTC455_49321	1969	41.03	Mlig455_028062, Mlig455_028124, Mlig455_028288	Neo: Int S/G2/M Age: Up-Down-Up	ANAPC4	1.697	-	-	-	0.952	-	0.745	Mlig455_028062 {REF} {Length: 2808} {TRANSSPLICED} {Pfam: Anaphase-promoting complex, cyclosome, subunit 4 [PF12896.9, score=86.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=51.5]} {Human: ENSG00000053900, ANAPC4, anaphase promoting complex subunit 4, [Score=137, Expect=1e-32]} {Mouse: ENSMUSG00000029176, Anapc4, anaphase promoting complex subunit 4, [Score=137, Expect=1e-32]} {Smed: dd_Smed_v6_4177_0_1, dd_Smed_v6_4177_0_1, [Score=66.2, Expect=4e-11]} {RNA1509_16279, RNA1509_27917} {RNA1310_6754, RNA1509_16279, RNA1509_27917} {RNA1509_16279, RNA1509_27917, RNA815_18544} Mlig455_028124 {REF} {Length: 2797} {TRANSSPLICED} {Pfam: Anaphase-promoting complex, cyclosome, subunit 4 [PF12896.9, score=86.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=52.6]} {Human: ENSG00000053900, ANAPC4, anaphase promoting complex subunit 4, [RH, Score=135, Expect=4e-32]} {Mouse: ENSMUSG00000029176, Anapc4, anaphase promoting complex subunit 4, [RH, Score=135, Expect=3e-32]} {Smed: dd_Smed_v6_4177_0_2, dd_Smed_v6_4177_0_2, [RH, Score=75.9, Expect=6e-14]} {RNA1509_16279} {RNA1310_6754} {RNA815_18544} Mlig455_028288 {REF} {Length: 2797} {TRANSSPLICED} {Pfam: Anaphase-promoting complex, cyclosome, subunit 4 [PF12896.9, score=78.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=51.5]} {Human: ENSG00000053900, ANAPC4, anaphase promoting complex subunit 4, [Score=130, Expect=2e-30]} {Mouse: ENSMUSG00000029176, Anapc4, anaphase promoting complex subunit 4, [Score=131, Expect=8e-31]} {Smed: dd_Smed_v6_4177_0_2, dd_Smed_v6_4177_0_2, [Score=52.8, Expect=9e-07]} {RNA1509_16279} {RNA1310_6754} {RNA815_18544}
10.	MligTC455_44235	6955	144.89	Mlig455_050301	Neo: Neoblast Age: logFC(26M/2M)=0.240	PTGES3	0.974	-	-	-	0.974	-	-	Mlig455_050301 {REF} {Length: 1566} {TRANSSPLICED} {Pfam: CS domain [PF04969.18, score=26.7]} {Human: ENSG00000110958, PTGES3, prostaglandin E synthase 3, [RH, Score=115, Expect=1e-32]} {Mouse: ENSMUSG00000071072, Ptges3, prostaglandin E synthase 3, [RH, Score=115, Expect=1e-32]} {Dmel: FBgn0037728, CG16817, [RH, Score=88.6, Expect=3e-22]} {Celegans: WBGene00022599, ZC395.10, Co-chaperone protein daf-41, [RH, Score=74.3, Expect=5e-17]} {Smed: dd_Smed_v6_462_0_1, dd_Smed_v6_462_0_1, [RH, Score=124, Expect=2e-36]} {RNA1509_10816, RNA1509_1083, RNA1509_23691, RNA1509_26451, RNA1509_32932, RNA1509_37162, RNA1509_57618} {RNA1310_20515.1, RNA1509_10816, RNA1509_1083, RNA1509_23691, RNA1509_26451, RNA1509_32932, RNA1509_37162, RNA1509_57618} {RNA1509_10816, RNA1509_1083, RNA1509_23691, RNA1509_26451, RNA1509_32932, RNA1509_37162, RNA1509_57618, RNA815_8128}
11.	MligTC455_50671	1121	23.36	Mlig455_026661	Neo: - Age: -	SF3A2	0.953	-	-	-	0.953	-	-	Mlig455_026661 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) [PF16835.7, score=126.8]; Zinc-finger of C2H2 type [PF12874.9, score=30.7]; Cactus-binding C-terminus of cactin protein [PF09732.11, score=19.5]} {Human: ENSG00000104897, SF3A2, splicing factor 3a subunit 2, [RH, Score=353, Expect=1e-119]} {Mouse: ENSMUSG00000020211, Sf3a2, splicing factor 3a, subunit 2, [Score=353, Expect=2e-119]} {Dmel: FBgn0036314, Sf3a2, Splicing factor 3a subunit 2, [RH, Score=376, Expect=1e-131]} {Celegans: WBGene00008683, repo-1, REversed POlarity in early embryos, [RH, Score=360, Expect=4e-126]} {Smed: dd_Smed_v6_1788_0_1, dd_Smed_v6_1788_0_1, [RH, Score=366, Expect=2e-127]} {RNA1509_9978} {RNA1310_38332.1} {RNA815_9802}
12.	MligTC455_45210	871	18.15	Mlig455_035239	Neo: - Age: Up-Down-Up	FOXRED1	0.951	-	-	-	0.951	-	-	Mlig455_035239 {REF} {Length: 2479} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=111.0]} {Human: ENSG00000110074, FOXRED1, FAD dependent oxidoreductase domain containing 1, [Score=270, Expect=3e-87]} {Mouse: ENSMUSG00000039048, Foxred1, FAD-dependent oxidoreductase domain containing 1, [Score=249, Expect=5e-79]} {Dmel: FBgn0033093, CG3270, [Score=258, Expect=3e-83]} {Celegans: WBGene00010847, M04B2.4, [Score=187, Expect=4e-55]} {Smed: dd_Smed_v6_10791_0_1, dd_Smed_v6_10791_0_1, [Score=256, Expect=8e-83]} {RNA1509_45974} {RNA1310_14202} {RNA815_14822}
13.	MligTC455_45211	869	18.1	Mlig455_035285	Neo: - Age: -	FOXRED1	0.951	-	-	-	0.951	-	-	Mlig455_035285 {REF} {Length: 2737} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=170.2]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=21.2]; GMC oxidoreductase [PF00732.21, score=18.2]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=17.9]} {Human: ENSG00000110074, FOXRED1, FAD dependent oxidoreductase domain containing 1, [Score=246, Expect=2e-74]} {Mouse: ENSMUSG00000039048, Foxred1, FAD-dependent oxidoreductase domain containing 1, [Score=239, Expect=6e-72]} {Dmel: FBgn0033093, CG3270, [Score=219, Expect=3e-65]} {Celegans: WBGene00010847, M04B2.4, [Score=205, Expect=6e-59]} {Smed: dd_Smed_v6_3803_0_1, dd_Smed_v6_3803_0_1, [Score=251, Expect=1e-76]} {RNA1509_45974} {RNA1310_14202} {RNA815_14822}

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