Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_45211 | 869 | 18.10 | Mlig455_035285 | Neo: - Age: - |
FOXRED1 | Mlig455_035285 {REF} {Length: 2737} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=170.2]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=21.2]; GMC oxidoreductase [PF00732.21, score=18.2]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=17.9]} {Human: ENSG00000110074, FOXRED1, FAD dependent oxidoreductase domain containing 1, [Score=246, Expect=2e-74]} {Mouse: ENSMUSG00000039048, Foxred1, FAD-dependent oxidoreductase domain containing 1, [Score=239, Expect=6e-72]} {Dmel: FBgn0033093, CG3270, [Score=219, Expect=3e-65]} {Celegans: WBGene00010847, M04B2.4, [Score=205, Expect=6e-59]} {Smed: dd_Smed_v6_3803_0_1, dd_Smed_v6_3803_0_1, [Score=251, Expect=1e-76]} {RNA1509_45974} {RNA1310_14202} {RNA815_14822} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.197 | 4.492 | 0.82684 | 1.00000 | |
RegionR2 | -0.169 | 4.492 | 0.67566 | 1.00000 | |
RegionR3 | 0.322 | 4.492 | 0.29929 | 0.84196 | |
RegionR4 | -0.185 | 4.492 | 0.62733 | 0.93609 | |
RegionR5 | -0.067 | 4.492 | 0.81367 | 1.00000 | |
RegionR6 | -0.431 | 4.492 | 0.19532 | 0.76357 | |
RegionR7 | 0.745 | 4.492 | 0.04905 | 0.42579 | |
RegionR8 | -0.018 | 4.492 | 0.97294 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.933 | 4.492 | 0.56395 | 1.00000 | |
RegenerationR2 | 0.209 | 4.492 | 0.55244 | 0.89471 | |
RegenerationR3 | -0.02 | 4.492 | 0.95752 | 1.00000 | |
RegenerationR4 | 0.435 | 4.492 | 0.25425 | 0.70216 | |
RegenerationR5 | 0.404 | 4.492 | 0.22972 | 0.66409 | |
RegenerationR6 | 0.991 | 4.492 | 0.00880 | 0.11537 | |
RegenerationBL | 0.253 | 4.492 | 0.57576 | 0.92894 | |
RegenerationTP | -0.157 | 4.492 | 0.74559 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_45211 | 869 | 18.1 | Mlig455_035285 | Neo: - Age: - |
FOXRED1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_035285 {REF} {Length: 2737} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=170.2]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=21.2]; GMC oxidoreductase [PF00732.21, score=18.2]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=17.9]} {Human: ENSG00000110074, FOXRED1, FAD dependent oxidoreductase domain containing 1, [Score=246, Expect=2e-74]} {Mouse: ENSMUSG00000039048, Foxred1, FAD-dependent oxidoreductase domain containing 1, [Score=239, Expect=6e-72]} {Dmel: FBgn0033093, CG3270, [Score=219, Expect=3e-65]} {Celegans: WBGene00010847, M04B2.4, [Score=205, Expect=6e-59]} {Smed: dd_Smed_v6_3803_0_1, dd_Smed_v6_3803_0_1, [Score=251, Expect=1e-76]} {RNA1509_45974} {RNA1310_14202} {RNA815_14822} |
2. | MligTC455_45210 | 871 | 18.15 | Mlig455_035239 | Neo: - Age: Up-Down-Up |
FOXRED1 | 5.993 | 1.000 | 1.000 | 1.000 | 1.000 | 0.993 | 1.000 | Mlig455_035239 {REF} {Length: 2479} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=111.0]} {Human: ENSG00000110074, FOXRED1, FAD dependent oxidoreductase domain containing 1, [Score=270, Expect=3e-87]} {Mouse: ENSMUSG00000039048, Foxred1, FAD-dependent oxidoreductase domain containing 1, [Score=249, Expect=5e-79]} {Dmel: FBgn0033093, CG3270, [Score=258, Expect=3e-83]} {Celegans: WBGene00010847, M04B2.4, [Score=187, Expect=4e-55]} {Smed: dd_Smed_v6_10791_0_1, dd_Smed_v6_10791_0_1, [Score=256, Expect=8e-83]} {RNA1509_45974} {RNA1310_14202} {RNA815_14822} |
3. | MligTC455_44619 | 1355 | 28.24 | Mlig455_011439 | Neo: - Age: logFC(26M/2M)=0.207 Regeneration-upregulated BL: 2.023 Regeneration-enriched BL: 2.023 |
ECI2 | 2.675 | - | 0.853 | - | 0.976 | - | 0.846 | Mlig455_011439 {REF} {Length: 1546} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=133.3]; Acyl CoA binding protein [PF00887.21, score=88.8]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=72.9]} {Human: ENSG00000198721, ECI2, enoyl-CoA delta isomerase 2, [RH, Score=352, Expect=2e-119]} {Mouse: ENSMUSG00000021417, Eci2, enoyl-Coenzyme A delta isomerase 2, [RH, Score=352, Expect=1e-119]} {Dmel: FBgn0035169, CG13890, [RH, Score=161, Expect=6e-47]} {Celegans: WBGene00001153, ech-4, Enoyl-CoA Hydratase, [RH, Score=277, Expect=3e-90]} {Smed: dd_Smed_v6_5239_0_1, dd_Smed_v6_5239_0_1, [RH, Score=423, Expect=8e-148]} {RNA1509_3390} {RNA1310_18160, RNA1509_3390} {RNA1509_3390, RNA815_6994} |
4. | MligTC455_36645 | 1677 | 34.93 | Mlig455_012378 | Neo: - Age: - |
JAGN1 | 2.434 | - | - | - | 0.956 | 0.737 | 0.741 | Mlig455_012378 {REF} {Length: 1144} {TRANSSPLICED} {Pfam: Jagunal, ER re-organisation during oogenesis [PF07086.14, score=91.8]} {Human: ENSG00000171135, JAGN1, jagunal homolog 1, [Score=64.7, Expect=2e-12]} {Mouse: ENSMUSG00000051256, Jagn1, jagunal homolog 1, [Score=63.5, Expect=4e-12]} {Smed: dd_Smed_v6_3028_0_1, dd_Smed_v6_3028_0_1, [Score=80.9, Expect=6e-19]} {RNA1509_24943} {RNA1310_32282.1} {RNA815_15026} |
5. | MligTC455_44230 | 2968 | 61.83 | Mlig455_010488, Mlig455_061892 | Neo: - Age: - |
1.849 | - | - | - | 0.956 | - | 0.893 | Mlig455_010488 {REF} {Length: 2026} {TRANSSPLICED} {RNA1509_10432} {RNA1310_29941} {RNA815_15146} Mlig455_061892 {REF} {Length: 2024} {TRANSSPLICED} {RNA1509_10432} {RNA1310_29941} {RNA815_15146} |
|
6. | MligTC455_48738 | 3747 | 78.06 | Mlig455_002401, Mlig455_057636, Mlig455_060154 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.346 Region-enriched R5: 1.033/0.00363 |
MRPL3 | 1.848 | - | - | - | 0.892 | - | 0.956 | Mlig455_002401 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.24, score=40.1]; Ribosomal protein S6 [PF01250.19, score=34.0]} {Human: ENSG00000114686, MRPL3, mitochondrial ribosomal protein L3, [RH, Score=166, Expect=3e-46]} {Mouse: ENSMUSG00000032563, Mrpl3, mitochondrial ribosomal protein L3, [RH, Score=159, Expect=8e-44]} {Dmel: FBgn0030686, mRpL3, mitochondrial ribosomal protein L3, [RH, Score=196, Expect=1e-57]} {Celegans: WBGene00016142, mrps-18C, Putative 39S ribosomal protein L3, mitochondrial, [RH, Score=124, Expect=9e-31]} {Smed: dd_Smed_v6_2057_0_1, dd_Smed_v6_2057_0_1, [RH, Score=276, Expect=2e-88]} {RNA1509_40692} {RNA1310_23165} {RNA815_9925.1} Mlig455_057636 {REF} {Length: 1417} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.24, score=41.0]} {Human: ENSG00000114686, MRPL3, mitochondrial ribosomal protein L3, [RH, Score=165, Expect=6e-47]} {Mouse: ENSMUSG00000032563, Mrpl3, mitochondrial ribosomal protein L3, [RH, Score=159, Expect=3e-45]} {Dmel: FBgn0030686, mRpL3, mitochondrial ribosomal protein L3, [RH, Score=196, Expect=3e-59]} {Celegans: WBGene00016142, mrps-18C, Putative 39S ribosomal protein L3, mitochondrial, [RH, Score=121, Expect=7e-31]} {Smed: dd_Smed_v6_2057_0_1, dd_Smed_v6_2057_0_1, [RH, Score=276, Expect=3e-90]} {RNA1509_26077} {RNA1310_23165, RNA1509_26077} {RNA1509_26077, RNA815_9925.1} Mlig455_060154 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.24, score=39.0]; Ribosomal protein S6 [PF01250.19, score=34.1]} {Human: ENSG00000114686, MRPL3, mitochondrial ribosomal protein L3, [RH, Score=164, Expect=3e-45]} {Mouse: ENSMUSG00000032563, Mrpl3, mitochondrial ribosomal protein L3, [RH, Score=160, Expect=3e-44]} {Dmel: FBgn0030686, mRpL3, mitochondrial ribosomal protein L3, [RH, Score=197, Expect=3e-58]} {Celegans: WBGene00016142, mrps-18C, Putative 39S ribosomal protein L3, mitochondrial, [RH, Score=124, Expect=7e-31]} {Smed: dd_Smed_v6_2057_0_1, dd_Smed_v6_2057_0_1, [RH, Score=280, Expect=1e-89]} {RNA1509_40692} {RNA1310_23165} {RNA815_9925.1} |
7. | MligTC455_48473 | 1799 | 37.49 | Mlig455_025739 | Neo: Int S/G2/M Age: - |
1.806 | - | - | - | 0.982 | 0.824 | - | Mlig455_025739 {REF} {Length: 1910} {TRANSSPLICED} {RNA1509_2480} {RNA1310_15034, RNA1509_2480} {RNA1509_2480, RNA815_5643} | |
8. | MligTC455_48211 | 976 | 20.33 | Mlig455_013971, Mlig455_035001 | Neo: - Age: logFC(26M/2M)=0.541 |
1.743 | - | - | - | 0.954 | - | 0.789 | Mlig455_013971 {REF} {Length: 687} {TRANSSPLICED} {Pfam: rRNA biogenesis protein RRP36 [PF06102.14, score=64.0]} {RNA1509_21344} {RNA1310_49166} {RNA815_27804} Mlig455_035001 {REF} {Length: 688} {TRANSSPLICED} {Pfam: rRNA biogenesis protein RRP36 [PF06102.14, score=64.0]} {RNA1509_21344} {RNA1310_49166, RNA1509_21344} {RNA1509_21344, RNA815_27804} |
|
9. | MligTC455_43955 | 936 | 19.51 | Mlig455_004401 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.301 Region-enriched R5: 1.996/0.00001 |
OXA1L | 1.674 | - | - | - | 0.956 | 0.718 | - | Mlig455_004401 {REF} {Length: 1411} {TRANSSPLICED} {Pfam: 60Kd inner membrane protein [PF02096.22, score=47.5]} {Human: ENSG00000155463, OXA1L, OXA1L, mitochondrial inner membrane protein, [RH, Score=140, Expect=9e-37]} {Mouse: ENSMUSG00000000959, Oxa1l, oxidase assembly 1-like, [RH, Score=146, Expect=2e-39]} {Dmel: FBgn0027615, CG6404, [RH, Score=140, Expect=2e-37]} {Celegans: WBGene00007215, oxa-1, OXA mitochondrial inner membrane insertase homolog, [RH, Score=100, Expect=3e-23]} {Smed: dd_Smed_v6_6233_1_2, dd_Smed_v6_6233_1_2, [RH, Score=101, Expect=8e-24]} {RNA1509_10268, RNA1509_34542} {RNA1310_18722.1, RNA1509_10268, RNA1509_34542} {RNA1509_10268, RNA1509_34542, RNA815_10959} |
10. | MligTC455_22456 | 802 | 16.71 | Mlig455_060269 | Neo: Int S/G2/M Age: Down-Up-Up |
TCF25 | 1.67 | - | 0.718 | - | 0.952 | - | - | Mlig455_060269 {REF} {Length: 4181} {TRANSSPLICED} {Pfam: Transcriptional repressor TCF25 [PF04910.16, score=289.8]} {Human: ENSG00000141002, TCF25, transcription factor 25, [RH, Score=311, Expect=3e-96]} {Mouse: ENSMUSG00000001472, Tcf25, transcription factor 25 (basic helix-loop-helix), [RH, Score=315, Expect=3e-98]} {Dmel: FBgn0027549, CG7927, [RH, Score=236, Expect=3e-68]} {Celegans: WBGene00010620, K07A12.1, [RH, Score=196, Expect=3e-54]} {Smed: dd_Smed_v6_7136_0_1, dd_Smed_v6_7136_0_1, [RH, Score=154, Expect=7e-40]} {RNA1509_2192} {RNA1310_9021, RNA1509_2192} {RNA1509_2192, RNA815_8563} |
11. | MligTC455_34816 | 2518 | 52.47 | Mlig455_009861 | Neo: - Age: - Region-enriched R5: 1.172/0.00004 |
GYS1 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_009861 {REF} {Length: 4496} {Pfam: Glycogen synthase [PF05693.15, score=1066.3]; Glycosyl transferases group 1 [PF00534.22, score=24.3]; Glycosyl transferases group 1 [PF13692.8, score=20.4]} {Human: ENSG00000104812, GYS1, glycogen synthase 1, [RH, Score=816, Expect=0.0]; ENSG00000111713, GYS2, glycogen synthase 2, [RH, Score=786, Expect=0.0]} {Mouse: ENSMUSG00000003865, Gys1, glycogen synthase 1, muscle, [RH, Score=813, Expect=0.0]; ENSMUSG00000030244, Gys2, glycogen synthase 2, [RH, Score=776, Expect=0.0]} {Dmel: FBgn0266064, GlyS, Glycogen synthase, [RH, Score=856, Expect=0.0]} {Celegans: WBGene00001793, gsy-1, Glycogen [starch] synthase, [RH, Score=773, Expect=0.0]} {Smed: dd_Smed_v6_3119_0_1, dd_Smed_v6_3119_0_1, [RH, Score=912, Expect=0.0]} {RNA1509_10273, RNA1509_10369, RNA1509_16995, RNA1509_2838, RNA1509_56751, RNA1509_7678} {RNA1310_4776, RNA1509_10273, RNA1509_10369, RNA1509_16995, RNA1509_2838, RNA1509_56751, RNA1509_7678} {RNA1509_10273, RNA1509_10369, RNA1509_16995, RNA1509_2838, RNA1509_56751, RNA1509_7678, RNA815_2299} |
12. | MligTC455_20295 | 4868 | 101.42 | Mlig455_009806, Mlig455_010373 | Neo: Int S/G2/M |
PNO1 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_009806 {REF} {Length: 3596} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=20.2]} {Human: ENSG00000115946, PNO1, partner of NOB1 homolog, [RH, Score=206, Expect=4e-66]} {Mouse: ENSMUSG00000020116, Pno1, partner of NOB1 homolog, [RH, Score=207, Expect=5e-67]} {Dmel: FBgn0027334, l(1)G0004, lethal (1) G0004, [RH, Score=214, Expect=1e-69]} {Celegans: WBGene00013144, Y53C12B.2, RNA-binding protein pno-1, [RH, Score=201, Expect=2e-64]} {Smed: dd_Smed_v6_1077_0_1, dd_Smed_v6_1077_0_1, [RH, Score=131, Expect=3e-38]} {RNA1509_6066, RNA1509_8823} {RNA1310_27467, RNA1509_8823} {RNA1509_8823, RNA815_20932} Mlig455_010373 {REF} {Length: 3951} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=18.8]} {Human: ENSG00000115946, PNO1, partner of NOB1 homolog, [RH, Score=206, Expect=3e-66]} {Mouse: ENSMUSG00000020116, Pno1, partner of NOB1 homolog, [RH, Score=207, Expect=5e-67]} {Dmel: FBgn0027334, l(1)G0004, lethal (1) G0004, [RH, Score=213, Expect=1e-69]} {Celegans: WBGene00013144, Y53C12B.2, RNA-binding protein pno-1, [RH, Score=201, Expect=2e-64]} {Smed: dd_Smed_v6_1077_0_1, dd_Smed_v6_1077_0_1, [RH, Score=129, Expect=2e-37]} {RNA1509_46964, RNA1509_6066} {RNA1310_27467, RNA1509_46964, RNA1509_6066} {RNA1509_46964, RNA1509_6066, RNA815_20932} |
13. | MligTC455_23178 | 871 | 18.15 | Mlig455_003219 | Neo: - Age: Down-Down-Down Region-enriched R4: 1.649/0.00078 |
CLPP | 0.951 | - | - | - | 0.951 | - | - | Mlig455_003219 {REF} {Length: 705} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=72.7]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=97.8, Expect=9e-25]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=100, Expect=7e-26]} {Dmel: FBgn0032229, CG5045, [Score=95.5, Expect=2e-24]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [Score=66.2, Expect=6e-14]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [Score=77.8, Expect=4e-18]} {RNA1509_8834} {RNA1310_60933} {RNA815_17954.1} |
14. | MligTC455_23179 | 2632 | 54.84 | Mlig455_003014, Mlig455_003210, Mlig455_003307 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.491/0.00075 |
CLPP | 0.951 | - | - | - | 0.951 | - | - | Mlig455_003014 {REF} {Length: 886} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=206.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=235, Expect=1e-77]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [Score=237, Expect=1e-78]} {Dmel: FBgn0032229, CG5045, [Score=223, Expect=3e-73]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [Score=195, Expect=4e-63]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [Score=184, Expect=2e-58]} {RNA1509_8834} {RNA1310_37141} {RNA815_17954.1} Mlig455_003210 {REF} {Length: 942} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=262.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=274, Expect=1e-92]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=279, Expect=1e-94]} {Dmel: FBgn0032229, CG5045, [RH, Score=265, Expect=2e-89]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [RH, Score=233, Expect=2e-77]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [RH, Score=224, Expect=7e-74]} {RNA1509_8834} {RNA1310_37141, RNA1509_8834} {RNA1509_8834, RNA815_17954.1} Mlig455_003307 {REF} {Length: 938} {TRANSSPLICED} {Pfam: Clp protease [PF00574.25, score=262.1]} {Human: ENSG00000125656, CLPP, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=274, Expect=1e-92]} {Mouse: ENSMUSG00000002660, Clpp, caseinolytic mitochondrial matrix peptidase proteolytic subunit, [RH, Score=279, Expect=1e-94]} {Dmel: FBgn0032229, CG5045, [RH, Score=265, Expect=2e-89]} {Celegans: WBGene00014172, clpp-1, ATP-dependent Clp protease proteolytic subunit 1, mitochondrial, [RH, Score=233, Expect=2e-77]} {Smed: dd_Smed_v6_8492_0_1, dd_Smed_v6_8492_0_1, [RH, Score=224, Expect=7e-74]} {RNA1509_56270, RNA1509_8834} {RNA1310_37141, RNA1509_56270} {RNA1509_56270, RNA815_17954.1} |
15. | MligTC455_53547 | 1647 | 34.32 | Mlig455_053254 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.293 Region-enriched R5: 1.387/0.00245 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_053254 {REF} {Length: 1497} {TRANSSPLICED} {Pfam: Ribosomal protein L1p/L10e family [PF00687.23, score=72.2]} {Mouse: ENSMUSG00000005846, Rsl1d1, ribosomal L1 domain containing 1, [RH, Score=84.7, Expect=2e-17]} {Dmel: FBgn0032050, CG13096, [RH, Score=60.8, Expect=1e-09]} {RNA1509_28407, RNA1509_46960, RNA1509_58126, RNA1509_9899} {RNA1310_21589.1, RNA1509_28407, RNA1509_46960, RNA1509_58126, RNA1509_9899} {RNA1509_28407, RNA1509_46960, RNA1509_58126, RNA1509_9899, RNA815_8768} |