Data search
Results for MligTC455_23212
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23212 | 38 | 0.78 | Mlig455_009488 | Neo: - Age: Down-Down-Up |
Mlig455_009488 {REF} {Length: 2813} {RNA1509_12774} {RNA1310_9477.1} {RNA815_3474.1} |
Cumulative graph for MligTC455_23212
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.815 | 1.239 | 0.99978 | 1.00000 | |
| RegionR2 | -0.507 | 1.239 | 0.66696 | 0.99678 | |
| RegionR3 | -1.928 | 1.239 | 0.99972 | 1.00000 | |
| RegionR4 | 4.213 | 1.239 | 0.01384 | 0.07781 | |
| RegionR5 | -0.392 | 1.239 | 0.99973 | 1.00000 | |
| RegionR6 | 2.067 | 1.239 | 0.08050 | 0.52325 | |
| RegionR7 | -1.908 | 1.239 | 0.99978 | 1.00000 | |
| RegionR8 | -0.73 | 1.239 | 0.99974 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.218 | 1.239 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.634 | 1.239 | 0.61139 | 0.91984 | |
| RegenerationR3 | 2.688 | 1.239 | 0.11917 | 0.53698 | |
| RegenerationR4 | -0.642 | 1.239 | 0.68021 | 0.94576 | |
| RegenerationR5 | 2.071 | 1.239 | 0.12303 | 0.52469 | |
| RegenerationR6 | -2.862 | 1.239 | 0.03265 | 0.22584 | |
| RegenerationBL | 0.857 | 1.239 | 0.60882 | 0.95466 | |
| RegenerationTP | 2.619 | 1.239 | 0.39770 | 0.82760 |
Genes with expression patterns similar to MligTC455_23212
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23212 | 38 | 0.78 | Mlig455_009488 | Neo: - Age: Down-Down-Up |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009488 {REF} {Length: 2813} {RNA1509_12774} {RNA1310_9477.1} {RNA815_3474.1} | |
| 2. | MligTC455_29566 | 135 | 2.81 | Mlig455_042896 | Neo: - Age: Up-Down-Up |
BRCA2 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_042896 {REF} {Length: 5363} {TRANSSPLICED} {Pfam: BRCA2 repeat [PF00634.20, score=101.4]; BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 [PF09103.12, score=100.3]; BRCA2, helical [PF09169.12, score=41.6]; BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 [PF09104.12, score=21.1]} {Human: ENSG00000139618, BRCA2, BRCA2, DNA repair associated, [RH, Score=199, Expect=1e-50]} {Mouse: ENSMUSG00000041147, Brca2, breast cancer 2, early onset, [RH, Score=203, Expect=4e-52]} {Smed: dd_Smed_v6_12551_0_1, dd_Smed_v6_12551_0_1, [RH, Score=264, Expect=7e-72]} {RNA1509_17440} {RNA1310_10005.2, RNA1509_17440} {RNA1509_17440, RNA815_9591} |
| 3. | MligTC455_14560 | 59 | 1.24 | Mlig455_044575 | Neo: - Age: - |
ELAVL4 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_044575 {REF} {Length: 3556} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=139.8]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [Score=281, Expect=3e-90]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=276, Expect=8e-89]; ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [Score=274, Expect=1e-87]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [RH, Score=271, Expect=3e-88]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=275, Expect=1e-87]} {Celegans: WBGene00001368, exc-7, [RH, Score=268, Expect=2e-84]} {Smed: dd_Smed_v6_11311_0_2, dd_Smed_v6_11311_0_2, [RH, Score=300, Expect=7e-98]} {RNA1310_23161} {RNA815_15911} |
| 4. | MligTC455_15564 | 86 | 1.79 | Mlig455_054618 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_054618 {REF} {Length: 920} {NoTransDecoderORF} {RNA1310_55174} {RNA815_12298} |
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