Data search
Results for MligTC455_29566
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29566 | 135 | 2.81 | Mlig455_042896 | Neo: - Age: Up-Down-Up |
BRCA2 | Mlig455_042896 {REF} {Length: 5363} {TRANSSPLICED} {Pfam: BRCA2 repeat [PF00634.20, score=101.4]; BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 [PF09103.12, score=100.3]; BRCA2, helical [PF09169.12, score=41.6]; BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 [PF09104.12, score=21.1]} {Human: ENSG00000139618, BRCA2, BRCA2, DNA repair associated, [RH, Score=199, Expect=1e-50]} {Mouse: ENSMUSG00000041147, Brca2, breast cancer 2, early onset, [RH, Score=203, Expect=4e-52]} {Smed: dd_Smed_v6_12551_0_1, dd_Smed_v6_12551_0_1, [RH, Score=264, Expect=7e-72]} {RNA1509_17440} {RNA1310_10005.2, RNA1509_17440} {RNA1509_17440, RNA815_9591} |
Cumulative graph for MligTC455_29566
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.804 | 2.21 | 0.57768 | 1.00000 | |
| RegionR2 | 1.157 | 2.21 | 0.20943 | 0.57281 | |
| RegionR3 | 0.865 | 2.21 | 0.23070 | 0.77205 | |
| RegionR4 | 0.599 | 2.21 | 0.40301 | 0.72968 | |
| RegionR5 | 1.39 | 2.21 | 0.02959 | 0.12837 | |
| RegionR6 | 1.493 | 2.21 | 0.04505 | 0.39676 | |
| RegionR7 | -5.381 | 2.21 | 0.01958 | 0.25887 | |
| RegionR8 | -0.927 | 2.21 | 0.97238 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.659 | 2.21 | 0.41742 | 1.00000 | |
| RegenerationR2 | 1.485 | 2.21 | 0.01201 | 0.17867 | |
| RegenerationR3 | 1.076 | 2.21 | 0.11893 | 0.53678 | |
| RegenerationR4 | 1.102 | 2.21 | 0.11700 | 0.52224 | |
| RegenerationR5 | 0.148 | 2.21 | 0.79168 | 0.98629 | |
| RegenerationR6 | -0.049 | 2.21 | 0.95456 | 1.00000 | |
| RegenerationBL | 1.769 | 2.21 | 0.29630 | 0.65890 | |
| RegenerationTP | 4.007 | 2.21 | 0.02110 | 0.24828 |
Genes with expression patterns similar to MligTC455_29566
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29566 | 135 | 2.81 | Mlig455_042896 | Neo: - Age: Up-Down-Up |
BRCA2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042896 {REF} {Length: 5363} {TRANSSPLICED} {Pfam: BRCA2 repeat [PF00634.20, score=101.4]; BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 [PF09103.12, score=100.3]; BRCA2, helical [PF09169.12, score=41.6]; BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 [PF09104.12, score=21.1]} {Human: ENSG00000139618, BRCA2, BRCA2, DNA repair associated, [RH, Score=199, Expect=1e-50]} {Mouse: ENSMUSG00000041147, Brca2, breast cancer 2, early onset, [RH, Score=203, Expect=4e-52]} {Smed: dd_Smed_v6_12551_0_1, dd_Smed_v6_12551_0_1, [RH, Score=264, Expect=7e-72]} {RNA1509_17440} {RNA1310_10005.2, RNA1509_17440} {RNA1509_17440, RNA815_9591} |
| 2. | MligTC455_29567 | 148 | 3.08 | Mlig455_064154 | Neo: Int S/G2/M Age: Up-Down-Up |
4.582 | 0.988 | 0.993 | 0.732 | 0.936 | - | 0.933 | Mlig455_064154 {REF} {Length: 2354} {RNA1509_17440} {RNA1310_10005.3} {RNA815_20586} | |
| 3. | MligTC455_36135 | 349 | 7.27 | Mlig455_035833 | Neo: - Age: logFC(26M/2M)=-0.250 Region-enriched R2: 1.807/0.04676 |
TMEM136 | 1.687 | - | 0.722 | - | 0.965 | - | - | Mlig455_035833 {REF} {Length: 4101} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=58.2]} {Human: ENSG00000181264, TMEM136, transmembrane protein 136, [Score=141, Expect=6e-40]} {Mouse: ENSMUSG00000048503, Tmem136, transmembrane protein 136, [RH, Score=151, Expect=4e-44]} {Smed: dd_Smed_v6_10466_0_2, dd_Smed_v6_10466_0_2, [Score=107, Expect=3e-27]} {RNA1509_28012, RNA1509_31839, RNA1509_33137, RNA1509_38016, RNA1509_39159, RNA1509_4609, RNA1509_52725, RNA1509_53215, RNA1509_53779, RNA1509_54514, RNA1509_59953} {RNA1310_22756, RNA1509_28012, RNA1509_31839, RNA1509_33137, RNA1509_38016, RNA1509_39159, RNA1509_4609, RNA1509_52725, RNA1509_53215, RNA1509_53779, RNA1509_54514, RNA1509_59953} {RNA1509_28012, RNA1509_31839, RNA1509_33137, RNA1509_38016, RNA1509_39159, RNA1509_4609, RNA1509_52725, RNA1509_53215, RNA1509_53779, RNA1509_54514, RNA1509_59953, RNA815_18597} |
| 4. | MligTC455_50847 | 85 | 1.77 | Mlig455_063467 | Neo: - Age: - |
MPEG1 | 0.981 | - | - | - | - | 0.981 | - | Mlig455_063467 {REF} {Length: 3032} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [Score=63.9, Expect=1e-11]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [Score=67.8, Expect=4e-13]} {Smed: dd_Smed_v6_12605_0_1, dd_Smed_v6_12605_0_1, [Score=50.8, Expect=8e-08]} {RNA1310_21221} {RNA815_6129.1} |
| 5. | MligTC455_23212 | 38 | 0.78 | Mlig455_009488 | Neo: - Age: Down-Down-Up |
0.964 | - | - | 0.964 | - | - | - | Mlig455_009488 {REF} {Length: 2813} {RNA1509_12774} {RNA1310_9477.1} {RNA815_3474.1} | |
| 6. | MligTC455_17385 | 183 | 3.81 | Mlig455_060578 | Neo: - Age: Down-Down-Up |
0.956 | - | - | - | - | - | 0.956 | Mlig455_060578 {REF} {Length: 1995} {TRANSSPLICED} {RNA1509_40671} {RNA1310_24234.1} {RNA815_9984} | |
| 7. | MligTC455_47276 | 617 | 12.85 | Mlig455_069459 | Neo: - Age: Up-Down-Down |
ZNF732 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_069459 {REF} {Length: 4576} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=76.1]; Zinc-finger double domain [PF13465.8, score=69.7]; C2H2-type zinc finger [PF13894.8, score=69.0]; zinc-finger C2H2-type [PF16622.7, score=29.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=27.0]; Zinc-finger of C2H2 type [PF12874.9, score=24.6]; Small zinc finger protein HVO_2753-like, Zn-binding pocket [PF07754.13, score=18.4]} {Human: ENSG00000186777, ZNF732, zinc finger protein 732, [Score=113, Expect=4e-26]; ENSG00000204604, ZNF468, zinc finger protein 468, [Score=111, Expect=9e-26]; ENSG00000272602, ZNF595, zinc finger protein 595, [Score=108, Expect=1e-24]} {Mouse: ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=108, Expect=1e-24]; ENSMUSG00000029127, Zbtb49, zinc finger and BTB domain containing 49, [Score=107, Expect=3e-24]; ENSMUSG00000074282, Zfp94, zinc finger protein 94, [Score=107, Expect=9e-25]; ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=106, Expect=7e-24]; ENSMUSG00000060510, Zfp266, zinc finger protein 266, [Score=106, Expect=4e-24]; ENSMUSG00000074733, Zfp950, zinc finger protein 950, [Score=105, Expect=7e-24]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=105, Expect=2e-23]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=105, Expect=1e-23]; ENSMUSG00000058192, Zfp846, zinc finger protein 846, [Score=105, Expect=9e-24]; ENSMUSG00000030386, Zfp606, zinc finger protein 606, [Score=104, Expect=3e-23]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=103, Expect=3e-23]; ENSMUSG00000078498, Zfp988, zinc finger protein 988, [Score=103, Expect=6e-23]; ENSMUSG00000069476, Zfp616, zinc finger protein 616, [Score=103, Expect=8e-23]; ENSMUSG00000024298, Zfp871, zinc finger protein 871, [Score=103, Expect=5e-23]; ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=103, Expect=4e-23]; ENSMUSG00000062040, Zfp27, zinc finger protein 27, [Score=103, Expect=4e-23]; ENSMUSG00000112640, Gm32687, predicted gene, 32687, [Score=103, Expect=4e-23]; ENSMUSG00000019826, Zbtb24, zinc finger and BTB domain containing 24, [Score=103, Expect=6e-23]} {Dmel: FBgn0025874, Meics, Meiotic central spindle, [Score=108, Expect=6e-25]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=77.8, Expect=3e-16]} {Smed: dd_Smed_v6_7687_0_1, dd_Smed_v6_7687_0_1, [Score=110, Expect=2e-26]} {RNA1509_17482, RNA1509_39622, RNA1509_42402, RNA1509_7280} {RNA1310_6315.1, RNA1509_17482, RNA1509_39622, RNA1509_42402, RNA1509_7280} {RNA1509_17482, RNA1509_39622, RNA1509_42402, RNA1509_7280, RNA815_1924} |
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