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Results for MligTC455_23263

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23263 2910 60.62 Mlig455_048754

Neo: -

Age: -

 RAD23A Mlig455_048754 {REF} {Length: 1703} {Pfam: UBA/TS-N domain [PF00627.33, score=78.5]; XPC-binding domain [PF09280.13, score=70.5]} {Human: ENSG00000179262, RAD23A, RAD23 homolog A, nucleotide excision repair protein, [Score=166, Expect=6e-50]; ENSG00000119318, RAD23B, RAD23 homolog B, nucleotide excision repair protein, [Score=160, Expect=9e-48]} {Mouse: ENSMUSG00000003813, Rad23a, RAD23 homolog A, nucleotide excision repair protein, [Score=166, Expect=5e-50]} {Dmel: FBgn0026777, Rad23, [Score=139, Expect=9e-40]} {Celegans: WBGene00013924, rad-23, [Score=115, Expect=6e-31]} {Smed: dd_Smed_v6_3017_0_1, dd_Smed_v6_3017_0_1, [Score=175, Expect=5e-54]} {RNA1509_11759, RNA1509_3909} {RNA1310_10730.1, RNA1509_3909} {RNA1509_3909, RNA815_3907.1}

Cumulative graph for MligTC455_23263

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.501 6.125 0.36448 1.00000
RegionR2 -0.671 6.125 0.01570 0.13255
RegionR3 0.121 6.125 0.57773 1.00000
RegionR4 0.833 6.125 0.00100 0.01043
RegionR5 0.602 6.125 0.00231 0.01943
RegionR6 0.274 6.125 0.21010 0.78769
RegionR7 -0.414 6.125 0.12391 0.66326
RegionR8 -0.245 6.125 0.42696 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.622 6.125 0.12109 0.85070
RegenerationR2 0.201 6.125 0.43313 0.83610
RegenerationR3 -0.217 6.125 0.41621 0.81265
RegenerationR4 -0.42 6.125 0.11858 0.52416
RegenerationR5 -0.156 6.125 0.53357 0.87631
RegenerationR6 0.236 6.125 0.36349 0.70766
RegenerationBL 0.119 6.125 0.67792 1.00000
RegenerationTP 0.03 6.125 0.92610 1.00000


Genes with expression patterns similar to MligTC455_23263

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23263 2910 60.62 Mlig455_048754

Neo: -

Age: -

 RAD23A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_048754 {REF} {Length: 1703} {Pfam: UBA/TS-N domain [PF00627.33, score=78.5]; XPC-binding domain [PF09280.13, score=70.5]} {Human: ENSG00000179262, RAD23A, RAD23 homolog A, nucleotide excision repair protein, [Score=166, Expect=6e-50]; ENSG00000119318, RAD23B, RAD23 homolog B, nucleotide excision repair protein, [Score=160, Expect=9e-48]} {Mouse: ENSMUSG00000003813, Rad23a, RAD23 homolog A, nucleotide excision repair protein, [Score=166, Expect=5e-50]} {Dmel: FBgn0026777, Rad23, [Score=139, Expect=9e-40]} {Celegans: WBGene00013924, rad-23, [Score=115, Expect=6e-31]} {Smed: dd_Smed_v6_3017_0_1, dd_Smed_v6_3017_0_1, [Score=175, Expect=5e-54]} {RNA1509_11759, RNA1509_3909} {RNA1310_10730.1, RNA1509_3909} {RNA1509_3909, RNA815_3907.1}
2. MligTC455_23264 2815 58.64 Mlig455_069743

Neo: -

Age: -

 RAD23B 5.82 0.992 0.978 0.995 0.990 0.989 0.876 Mlig455_069743 {REF} {Length: 2990} {Pfam: UBA/TS-N domain [PF00627.33, score=91.6]; Ubiquitin family [PF00240.25, score=69.5]; XPC-binding domain [PF09280.13, score=69.3]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=23.0]} {Human: ENSG00000119318, RAD23B, RAD23 homolog B, nucleotide excision repair protein, [RH, Score=250, Expect=2e-79]; ENSG00000179262, RAD23A, RAD23 homolog A, nucleotide excision repair protein, [RH, Score=243, Expect=2e-77]} {Mouse: ENSMUSG00000003813, Rad23a, RAD23 homolog A, nucleotide excision repair protein, [RH, Score=248, Expect=2e-79]; ENSMUSG00000028426, Rad23b, RAD23 homolog B, nucleotide excision repair protein, [RH, Score=239, Expect=1e-75]} {Dmel: FBgn0026777, Rad23, [RH, Score=200, Expect=2e-60]} {Celegans: WBGene00013924, rad-23, [RH, Score=157, Expect=6e-45]} {Smed: dd_Smed_v6_3017_0_1, dd_Smed_v6_3017_0_1, [RH, Score=258, Expect=7e-84]} {RNA1509_11759, RNA1509_2540, RNA1509_28784} {RNA1310_10730.1, RNA1509_11759, RNA1509_2540, RNA1509_28784} {RNA1509_11759, RNA1509_2540, RNA1509_28784, RNA815_3907.1}
3. MligTC455_24200 669 13.95 Mlig455_015201, Mlig455_027163

Neo: -

Age: -

 RAPGEF1 0.971 - - - - 0.971 -

Mlig455_015201 {REF} {Length: 3738} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=84.1]; RasGEF N-terminal motif [PF00618.22, score=23.8]} {Human: ENSG00000107263, RAPGEF1, Rap guanine nucleotide exchange factor 1, [Score=161, Expect=7e-40]} {Mouse: ENSMUSG00000039844, Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, [Score=164, Expect=1e-40]} {Dmel: FBgn0085421, Epac, Exchange protein directly activated by cAMP, [Score=60.5, Expect=6e-09]} {Celegans: WBGene00021320, Y34B4A.4, [RH, Score=171, Expect=2e-43]} {Smed: dd_Smed_v6_6136_0_1, dd_Smed_v6_6136_0_1, [RH, Score=107, Expect=2e-23]} {RNA1509_36789, RNA1509_47360} {RNA1310_2891.1, RNA1509_36789, RNA1509_47360} {RNA1509_36789, RNA1509_47360, RNA815_3191}

Mlig455_027163 {REF} {Length: 3767} {Pfam: RasGEF domain [PF00617.21, score=84.2]; RasGEF N-terminal motif [PF00618.22, score=23.8]} {Human: ENSG00000107263, RAPGEF1, Rap guanine nucleotide exchange factor 1, [Score=161, Expect=8e-40]} {Mouse: ENSMUSG00000039844, Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, [Score=164, Expect=1e-40]} {Dmel: FBgn0085421, Epac, Exchange protein directly activated by cAMP, [Score=60.5, Expect=7e-09]} {Celegans: WBGene00021320, Y34B4A.4, [RH, Score=172, Expect=5e-44]} {Smed: dd_Smed_v6_6136_0_1, dd_Smed_v6_6136_0_1, [RH, Score=110, Expect=2e-24]} {RNA1509_47360} {RNA1310_2891.1} {RNA815_3191}
4. MligTC455_47651 2087 43.48 Mlig455_013872, Mlig455_057738

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.433/0.00043

 NUP98 0.967 - - - - 0.967 -

Mlig455_013872 {REF} {Length: 3541} {Human: ENSG00000110713, NUP98, nucleoporin 98, [RH, Score=106, Expect=1e-22]} {Mouse: ENSMUSG00000063550, Nup98, nucleoporin 98, [RH, Score=103, Expect=4e-22]} {Dmel: FBgn0039120, Nup98-96, Nucleoporin 98-96kD, [Score=102, Expect=1e-21]} {Celegans: WBGene00003796, npp-10, Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96, [RH, Score=118, Expect=6e-27]} {Smed: dd_Smed_v6_5347_0_1, dd_Smed_v6_5347_0_1, [Score=71.6, Expect=2e-12]} {RNA1509_14875} {RNA1310_4705} {RNA815_4964}

Mlig455_057738 {REF} {Length: 5155} {Human: ENSG00000110713, NUP98, nucleoporin 98, [RH, Score=106, Expect=1e-22]} {Mouse: ENSMUSG00000063550, Nup98, nucleoporin 98, [RH, Score=103, Expect=3e-22]} {Dmel: FBgn0039120, Nup98-96, Nucleoporin 98-96kD, [Score=102, Expect=1e-21]} {Celegans: WBGene00003796, npp-10, Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96, [RH, Score=118, Expect=5e-27]} {Smed: dd_Smed_v6_5347_0_1, dd_Smed_v6_5347_0_1, [Score=70.9, Expect=2e-12]} {RNA1509_14875} {RNA1310_4705, RNA1509_14875} {RNA1509_14875, RNA815_4964}
5. MligTC455_46540 1149 23.94 Mlig455_050917, Mlig455_067796

Neo: -

Age: -

 TMEM167B 0.955 - - - - 0.955 -

Mlig455_050917 {REF} {Length: 1496} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1242) [PF06842.14, score=38.7]} {Human: ENSG00000215717, TMEM167B, transmembrane protein 167B, [RH, Score=114, Expect=7e-35]} {Mouse: ENSMUSG00000068732, Tmem167b, transmembrane protein 167B, [RH, Score=114, Expect=5e-35]} {Dmel: FBgn0040890, ksh, kish, [Score=42.4, Expect=9e-07]} {Celegans: WBGene00010639, K07F5.15, [RH, Score=100, Expect=6e-30]} {Smed: dd_Smed_v6_5363_0_1, dd_Smed_v6_5363_0_1, [RH, Score=100, Expect=8e-30]} {RNA1509_34736} {RNA1310_39136, RNA1509_34736} {RNA1509_34736, RNA815_39366}

Mlig455_067796 {REF} {Length: 1661} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1242) [PF06842.14, score=38.7]} {Human: ENSG00000215717, TMEM167B, transmembrane protein 167B, [RH, Score=114, Expect=7e-35]} {Mouse: ENSMUSG00000068732, Tmem167b, transmembrane protein 167B, [RH, Score=114, Expect=5e-35]} {Dmel: FBgn0040890, ksh, kish, [Score=42.4, Expect=9e-07]} {Celegans: WBGene00010639, K07F5.15, [RH, Score=100, Expect=6e-30]} {Smed: dd_Smed_v6_5363_0_1, dd_Smed_v6_5363_0_1, [RH, Score=100, Expect=8e-30]} {RNA1509_10889, RNA1509_24519, RNA1509_24693, RNA1509_33974} {RNA1310_47401, RNA1509_10889, RNA1509_24519, RNA1509_24693, RNA1509_33974} {RNA1509_10889, RNA1509_24519, RNA1509_24693, RNA1509_33974, RNA815_39366}

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