TomoSeq data search

Data search

Results for MligTC455_23284

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23284

2230

46.45

Mlig455_029281, Mlig455_058879

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.456

Region-enriched R8: 1.507/0.00032

FRRS1

Mlig455_029281 {REF} {Length: 2645} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=39.4]} {Human: ENSG00000156869, FRRS1, ferric chelate reductase 1, [RH, Score=118, Expect=1e-27]} {Mouse: ENSMUSG00000033386, Frrs1, ferric-chelate reductase 1, [Score=121, Expect=7e-29]} {Celegans: WBGene00007545, C13B4.1, [RH, Score=82.4, Expect=3e-16]} {Smed: dd_Smed_v6_4028_0_1, dd_Smed_v6_4028_0_1, [RH, Score=265, Expect=4e-83]} {RNA1509_37825, RNA1509_9195} {RNA1310_13928, RNA1509_37825, RNA1509_9195} {RNA1509_37825, RNA1509_9195, RNA815_2717}

Mlig455_058879 {REF} {Length: 2415} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=39.1]} {Human: ENSG00000156869, FRRS1, ferric chelate reductase 1, [RH, Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000033386, Frrs1, ferric-chelate reductase 1, [Score=121, Expect=8e-29]} {Celegans: WBGene00007545, C13B4.1, [RH, Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_4028_0_1, dd_Smed_v6_4028_0_1, [RH, Score=266, Expect=4e-83]} {RNA1509_9195} {RNA1310_13928} {RNA815_2717}

Cumulative graph for MligTC455_23284

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.248	5.703	0.72539	1.00000
RegionR2	-0.173	5.703	0.57196	0.93084
RegionR3	-0.719	5.703	0.00870	0.13946
RegionR4	-0.1	5.703	0.74101	1.00000
RegionR5	-0.744	5.703	0.00412	0.02997
RegionR6	-0.069	5.703	0.79223	1.00000
RegionR7	0.545	5.703	0.07352	0.52252
RegionR8	1.507	5.703	0.00000	0.00032

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.246	5.703	0.25730	0.96756
RegenerationR2	0.181	5.703	0.52292	0.88042
RegenerationR3	0.511	5.703	0.10551	0.51423
RegenerationR4	0.247	5.703	0.42019	0.82565
RegenerationR5	0.734	5.703	0.01358	0.20368
RegenerationR6	0.329	5.703	0.28034	0.62974
RegenerationBL	-0.523	5.703	0.10655	0.38528
RegenerationTP	-0.361	5.703	0.26366	0.71185

Genes with expression patterns similar to MligTC455_23284

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23284	2230	46.45	Mlig455_029281, Mlig455_058879	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.456 Region-enriched R8: 1.507/0.00032	FRRS1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_029281 {REF} {Length: 2645} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=39.4]} {Human: ENSG00000156869, FRRS1, ferric chelate reductase 1, [RH, Score=118, Expect=1e-27]} {Mouse: ENSMUSG00000033386, Frrs1, ferric-chelate reductase 1, [Score=121, Expect=7e-29]} {Celegans: WBGene00007545, C13B4.1, [RH, Score=82.4, Expect=3e-16]} {Smed: dd_Smed_v6_4028_0_1, dd_Smed_v6_4028_0_1, [RH, Score=265, Expect=4e-83]} {RNA1509_37825, RNA1509_9195} {RNA1310_13928, RNA1509_37825, RNA1509_9195} {RNA1509_37825, RNA1509_9195, RNA815_2717} Mlig455_058879 {REF} {Length: 2415} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=39.1]} {Human: ENSG00000156869, FRRS1, ferric chelate reductase 1, [RH, Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000033386, Frrs1, ferric-chelate reductase 1, [Score=121, Expect=8e-29]} {Celegans: WBGene00007545, C13B4.1, [RH, Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_4028_0_1, dd_Smed_v6_4028_0_1, [RH, Score=266, Expect=4e-83]} {RNA1509_9195} {RNA1310_13928} {RNA815_2717}
2.	MligTC455_48363	806	16.79	Mlig455_065066	Neo: - Age: -	CARS	1.698	-	-	-	0.731	-	0.967	Mlig455_065066 {REF} {Length: 3318} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=54.4]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [Score=124, Expect=2e-30]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [Score=124, Expect=2e-30]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [Score=124, Expect=1e-30]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [Score=116, Expect=4e-28]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [Score=97.8, Expect=6e-22]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [Score=111, Expect=9e-27]} {RNA1509_34862} {RNA1310_4882} {RNA815_1598}
3.	MligTC455_34264	320	6.66	Mlig455_036537	Neo: - Age: Up-Down-Up	DNAJC1	1.658	-	-	-	-	0.706	0.952	Mlig455_036537 {REF} {Length: 2732} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=63.1]; Myb-like DNA-binding domain [PF00249.33, score=49.0]; Myb-like DNA-binding domain [PF13921.8, score=25.7]} {Human: ENSG00000136770, DNAJC1, DnaJ heat shock protein family (Hsp40) member C1, [RH, Score=222, Expect=1e-65]} {Mouse: ENSMUSG00000026740, Dnajc1, DnaJ heat shock protein family (Hsp40) member C1, [Score=227, Expect=1e-67]} {Dmel: FBgn0030990, CG7556, [RH, Score=167, Expect=1e-45]} {Celegans: WBGene00018836, F54F2.9, [RH, Score=68.2, Expect=4e-12]} {Smed: dd_Smed_v6_4456_0_1, dd_Smed_v6_4456_0_1, [Score=249, Expect=2e-76]} {RNA1509_9861} {RNA1310_6717.1, RNA1509_9861} {RNA1509_9861, RNA815_18648}
4.	MligTC455_46928	2867	59.73	Mlig455_048845	Neo: - Age: -	CLPTM1	0.96	-	-	-	0.960	-	-	Mlig455_048845 {REF} {Length: 2909} {TRANSSPLICED} {Pfam: Cleft lip and palate transmembrane protein 1 (CLPTM1) [PF05602.14, score=479.4]; Protein of unknown function (DUF1761) [PF08570.12, score=23.4]} {Human: ENSG00000104853, CLPTM1, CLPTM1, transmembrane protein, [RH, Score=740, Expect=0.0]} {Mouse: ENSMUSG00000002981, Clptm1, cleft lip and palate associated transmembrane protein 1, [RH, Score=735, Expect=0.0]} {Dmel: FBgn0031590, CG3702, [RH, Score=661, Expect=0.0]} {Celegans: WBGene00011302, R166.2, [RH, Score=594, Expect=0.0]} {Smed: dd_Smed_v6_2152_0_1, dd_Smed_v6_2152_0_1, [RH, Score=766, Expect=0.0]} {RNA1509_23694, RNA1509_26934, RNA1509_2789, RNA1509_32601, RNA1509_45449} {RNA1310_9020, RNA1509_23694, RNA1509_26934, RNA1509_2789, RNA1509_32601, RNA1509_45449} {RNA1509_23694, RNA1509_26934, RNA1509_2789, RNA1509_32601, RNA1509_45449, RNA815_2968}
5.	MligTC455_46927	2817	58.68	Mlig455_020646	Neo: - Age: -	CLPTM1	0.954	-	-	-	0.954	-	-	Mlig455_020646 {REF} {Length: 2391} {TRANSSPLICED} {Pfam: Cleft lip and palate transmembrane protein 1 (CLPTM1) [PF05602.14, score=481.6]; Protein of unknown function (DUF1761) [PF08570.12, score=21.1]} {Human: ENSG00000104853, CLPTM1, CLPTM1, transmembrane protein, [RH, Score=748, Expect=0.0]} {Mouse: ENSMUSG00000002981, Clptm1, cleft lip and palate associated transmembrane protein 1, [RH, Score=740, Expect=0.0]} {Dmel: FBgn0031590, CG3702, [RH, Score=659, Expect=0.0]} {Celegans: WBGene00016469, C36B7.6, [RH, Score=596, Expect=0.0]} {Smed: dd_Smed_v6_2152_0_1, dd_Smed_v6_2152_0_1, [RH, Score=764, Expect=0.0]} {RNA1509_2789, RNA1509_28589} {RNA1310_9020, RNA1509_28589} {RNA1509_28589, RNA815_2968}
6.	MligTC455_43966	972	20.25	Mlig455_070780	Neo: Int S/G2/M Age: -	EMC10	0.952	-	-	-	0.952	-	-	Mlig455_070780 {REF} {Length: 876} {TRANSSPLICED} {Human: ENSG00000161671, EMC10, ER membrane protein complex subunit 10, [RH, Score=75.5, Expect=1e-15]} {Mouse: ENSMUSG00000008140, Emc10, ER membrane protein complex subunit 10, [RH, Score=79.0, Expect=2e-17]} {Dmel: FBgn0052441, CG32441, [RH, Score=64.7, Expect=1e-12]} {Celegans: WBGene00012829, Y43F8C.7, [RH, Score=62.4, Expect=8e-12]} {Smed: dd_Smed_v6_2594_0_1, dd_Smed_v6_2594_0_1, [RH, Score=89.7, Expect=5e-22]} {RNA1509_27493, RNA1509_41782} {RNA1310_9560, RNA1509_41782} {RNA1509_41782, RNA815_13374}
7.	MligTC455_52770	540	11.26	Mlig455_029166	Neo: - Age: Down-Down-Up Region-enriched R5: 1.250/0.00180	ZNF235	0.95	-	-	-	-	-	0.950	Mlig455_029166 {REF} {Length: 2786} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=106.2]; Zinc finger, C2H2 type [PF00096.28, score=89.6]; C2H2-type zinc finger [PF13894.8, score=87.2]; C2H2-type zinc finger [PF13912.8, score=49.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=48.4]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=22.8]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=21.3]; Zinc-finger of C2H2 type [PF12874.9, score=21.1]} {Human: ENSG00000159917, ZNF235, zinc finger protein 235, [Score=184, Expect=3e-52]} {Mouse: ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=179, Expect=1e-50]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=178, Expect=3e-50]; ENSMUSG00000067931, Zfp948, zinc finger protein 948, [Score=177, Expect=3e-50]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=172, Expect=2e-48]; ENSMUSG00000074865, Zfp934, zinc finger protein 934, [Score=171, Expect=5e-49]} {Dmel: FBgn0025874, Meics, Meiotic central spindle, [Score=146, Expect=2e-39]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=110, Expect=1e-26]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=117, Expect=5e-30]} {RNA1509_10690, RNA1509_13733, RNA1509_27867, RNA1509_41390} {RNA1310_16637, RNA1509_10690, RNA1509_13733, RNA1509_27867, RNA1509_41390} {RNA1509_10690, RNA1509_13733, RNA1509_27867, RNA1509_41390, RNA815_8191}

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