Data search


search
Exact
Search

Results for MligTC455_48363

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48363 806 16.79 Mlig455_065066

Neo: -

Age: -

CARS Mlig455_065066 {REF} {Length: 3318} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=54.4]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [Score=124, Expect=2e-30]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [Score=124, Expect=2e-30]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [Score=124, Expect=1e-30]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [Score=116, Expect=4e-28]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [Score=97.8, Expect=6e-22]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [Score=111, Expect=9e-27]} {RNA1509_34862} {RNA1310_4882} {RNA815_1598}

Cumulative graph for MligTC455_48363

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.778 4.41 0.43020 1.00000
RegionR2 0.325 4.41 0.48439 0.86779
RegionR3 -0.083 4.41 0.82487 1.00000
RegionR4 -0.182 4.41 0.67557 0.97101
RegionR5 0.11 4.41 0.74539 1.00000
RegionR6 -0.106 4.41 0.78288 1.00000
RegionR7 0.712 4.41 0.08653 0.56580
RegionR8 0.003 4.41 0.99436 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.204 4.41 0.32257 1.00000
RegenerationR2 -0.046 4.41 0.91476 1.00000
RegenerationR3 0 4.41 0.99925 1.00000
RegenerationR4 -0.586 4.41 0.21297 0.66012
RegenerationR5 -0.583 4.41 0.18756 0.61782
RegenerationR6 0.287 4.41 0.52411 0.82315
RegenerationBL 0.016 4.41 0.97342 1.00000
RegenerationTP -0.821 4.41 0.15533 0.58301


Genes with expression patterns similar to MligTC455_48363

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48363 806 16.79 Mlig455_065066

Neo: -

Age: -

CARS 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_065066 {REF} {Length: 3318} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=54.4]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [Score=124, Expect=2e-30]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [Score=124, Expect=2e-30]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [Score=124, Expect=1e-30]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [Score=116, Expect=4e-28]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [Score=97.8, Expect=6e-22]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [Score=111, Expect=9e-27]} {RNA1509_34862} {RNA1310_4882} {RNA815_1598}
2. MligTC455_48362 1815 37.8 Mlig455_053251, Mlig455_065042

Neo: -

Age: -

CARS 4.676 0.973 0.998 0.949 0.905 - 0.851

Mlig455_053251 {REF} {Length: 3222} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=402.4]; tRNA synthetases class I (M) [PF09334.13, score=23.9]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [RH, Score=608, Expect=0.0]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [RH, Score=618, Expect=0.0]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [RH, Score=536, Expect=1e-180]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_20614, RNA1509_8147} {RNA1310_4882, RNA1509_20614} {RNA1509_20614, RNA815_1598}

Mlig455_065042 {REF} {Length: 3135} {TRANSSPLICED} {Pfam: tRNA synthetases class I (C) catalytic domain [PF01406.21, score=400.2]; tRNA synthetases class I (M) [PF09334.13, score=23.5]} {Human: ENSG00000278191, CARS, cysteinyl-tRNA synthetase, [RH, Score=602, Expect=0.0]; ENSG00000110619, CARS, cysteinyl-tRNA synthetase, [RH, Score=602, Expect=0.0]} {Mouse: ENSMUSG00000010755, Cars, cysteinyl-tRNA synthetase, [RH, Score=604, Expect=0.0]} {Dmel: FBgn0027091, CysRS, Cysteinyl-tRNA synthetase, [RH, Score=609, Expect=0.0]} {Celegans: WBGene00000800, cars-1, Cysteinyl Amino-acyl tRNA Synthetase, [RH, Score=539, Expect=0.0]} {Smed: dd_Smed_v6_3750_0_1, dd_Smed_v6_3750_0_1, [RH, Score=663, Expect=0.0]} {RNA1509_13798, RNA1509_45508, RNA1509_8147} {RNA1310_4882, RNA1509_13798, RNA1509_45508, RNA1509_8147} {RNA1509_13798, RNA1509_45508, RNA1509_8147, RNA815_1598}
3. MligTC455_34897 109 2.27 Mlig455_070489

Neo: -

Age: Down-Down-Down

Region-enriched R4: 8.040/0.03362

1.74 - - 0.965 - - 0.775 Mlig455_070489 {REF} {Length: 825} {RNA1310_43059}
4. MligTC455_23284 2230 46.45 Mlig455_029281, Mlig455_058879

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.456

Region-enriched R8: 1.507/0.00032

FRRS1 1.698 - - - 0.731 - 0.967

Mlig455_029281 {REF} {Length: 2645} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=39.4]} {Human: ENSG00000156869, FRRS1, ferric chelate reductase 1, [RH, Score=118, Expect=1e-27]} {Mouse: ENSMUSG00000033386, Frrs1, ferric-chelate reductase 1, [Score=121, Expect=7e-29]} {Celegans: WBGene00007545, C13B4.1, [RH, Score=82.4, Expect=3e-16]} {Smed: dd_Smed_v6_4028_0_1, dd_Smed_v6_4028_0_1, [RH, Score=265, Expect=4e-83]} {RNA1509_37825, RNA1509_9195} {RNA1310_13928, RNA1509_37825, RNA1509_9195} {RNA1509_37825, RNA1509_9195, RNA815_2717}

Mlig455_058879 {REF} {Length: 2415} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=39.1]} {Human: ENSG00000156869, FRRS1, ferric chelate reductase 1, [RH, Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000033386, Frrs1, ferric-chelate reductase 1, [Score=121, Expect=8e-29]} {Celegans: WBGene00007545, C13B4.1, [RH, Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_4028_0_1, dd_Smed_v6_4028_0_1, [RH, Score=266, Expect=4e-83]} {RNA1509_9195} {RNA1310_13928} {RNA815_2717}
5. MligTC455_16945 280 5.83 Mlig455_066663

Neo: -

Age: -

1.689 - - - - 0.958 0.731 Mlig455_066663 {REF} {Length: 3888} {RNA1509_16283} {RNA1310_4864.1} {RNA815_4194.1}
6. MligTC455_22343 291 6.05 Mlig455_067688

Neo: -

Age: Up-Down-Down

0.966 - - 0.966 - - - Mlig455_067688 {REF} {Length: 1169} {NoTransDecoderORF} {RNA1509_30717, RNA1509_53081} {RNA1310_37685.3, RNA1509_53081} {RNA1509_53081, RNA815_13681}
7. MligTC455_16430 401 8.36 Mlig455_034784

Neo: -

Age: logFC(26M/2M)=-0.294

0.959 - - - - 0.959 - Mlig455_034784 {REF} {Length: 2260} {Dmel: FBgn0033661, CG13185, [Score=62.8, Expect=6e-10]} {RNA1509_11490} {RNA1310_53140} {RNA815_7177}
8. MligTC455_21075 331 6.89 Mlig455_039185

Neo: -

Age: Down-Up-Up

0.956 - - 0.956 - - - Mlig455_039185 {REF} {Length: 1125} {TRANSSPLICED} {Pfam: Elongator subunit Iki1 [PF10483.11, score=29.3]} {RNA1509_31160} {RNA1310_30401} {RNA815_14488}
9. MligTC455_12955 81 1.7 Mlig455_010928, Mlig455_033156

Neo: -

Age: -

0.955 - - - - 0.955 -

Mlig455_010928 {REF} {Length: 736} {NoTransDecoderORF} {RNA1310_133923}

Mlig455_033156 {REF} {Length: 1764} {NoTransDecoderORF} {RNA1310_129683}
10. MligTC455_37457 415 8.65 Mlig455_016352

Neo: -

Age: Up-Down-Down

Region-enriched R5: 2.629/0.00295

WDFY3 0.954 - - - 0.954 - - Mlig455_016352 {REF} {Length: 12786} {TRANSSPLICED} {Pfam: Beige/BEACH domain [PF02138.20, score=395.9]; FYVE zinc finger [PF01363.23, score=64.5]; PH domain associated with Beige/BEACH [PF14844.8, score=50.3]; WD domain, G-beta repeat [PF00400.34, score=36.0]} {Human: ENSG00000163625, WDFY3, WD repeat and FYVE domain containing 3, [RH, Score=2500, Expect=0.0]} {Mouse: ENSMUSG00000043940, Wdfy3, WD repeat and FYVE domain containing 3, [RH, Score=2510, Expect=0.0]} {Dmel: FBgn0043362, bchs, blue cheese, [RH, Score=2342, Expect=0.0]} {Celegans: WBGene00007752, wdfy-3, WD40 and FYVE domain protein, [RH, Score=1510, Expect=0.0]} {Smed: dd_Smed_v6_3398_0_2, dd_Smed_v6_3398_0_2, [RH, Score=1271, Expect=0.0]} {RNA1509_13925, RNA1509_3224} {RNA1310_1199.1, RNA1509_13925, RNA1509_3224} {RNA1509_13925, RNA1509_3224, RNA815_2088}
11. MligTC455_47123 443 9.22 Mlig455_029206

Neo: -

Age: -

VPS33B 0.954 - - 0.954 - - - Mlig455_029206 {REF} {Length: 2889} {TRANSSPLICED} {Pfam: Sec1 family [PF00995.25, score=215.0]} {Human: ENSG00000184056, VPS33B, VPS33B, late endosome and lysosome associated, [Score=201, Expect=2e-55]; ENSG00000284946, AC068831.7, novel transcript, [Score=196, Expect=3e-54]} {Mouse: ENSMUSG00000030534, Vps33b, vacuolar protein sorting 33B, [Score=199, Expect=4e-55]} {Dmel: FBgn0000257, car, carnation, [Score=142, Expect=2e-35]} {Celegans: WBGene00015130, vps-33.1, Vacuolar protein sorting-associated protein 33A, [Score=60.1, Expect=3e-09]} {Smed: dd_Smed_v6_7337_0_1, dd_Smed_v6_7337_0_1, [Score=99.0, Expect=2e-21]} {RNA1509_52229, RNA1509_7192} {RNA1310_3145, RNA1509_52229, RNA1509_7192} {RNA1509_52229, RNA1509_7192, RNA815_5420}
12. MligTC455_34264 320 6.66 Mlig455_036537

Neo: -

Age: Up-Down-Up

DNAJC1 0.953 - - - - - 0.953 Mlig455_036537 {REF} {Length: 2732} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=63.1]; Myb-like DNA-binding domain [PF00249.33, score=49.0]; Myb-like DNA-binding domain [PF13921.8, score=25.7]} {Human: ENSG00000136770, DNAJC1, DnaJ heat shock protein family (Hsp40) member C1, [RH, Score=222, Expect=1e-65]} {Mouse: ENSMUSG00000026740, Dnajc1, DnaJ heat shock protein family (Hsp40) member C1, [Score=227, Expect=1e-67]} {Dmel: FBgn0030990, CG7556, [RH, Score=167, Expect=1e-45]} {Celegans: WBGene00018836, F54F2.9, [RH, Score=68.2, Expect=4e-12]} {Smed: dd_Smed_v6_4456_0_1, dd_Smed_v6_4456_0_1, [Score=249, Expect=2e-76]} {RNA1509_9861} {RNA1310_6717.1, RNA1509_9861} {RNA1509_9861, RNA815_18648}
13. MligTC455_43545 1560 32.49 Mlig455_040214

Neo: -

Age: -

RBM26 0.952 - - - 0.952 - - Mlig455_040214 {REF} {Length: 3279} {Pfam: PWI domain [PF01480.19, score=31.1]} {Human: ENSG00000139746, RBM26, RNA binding motif protein 26, [RH, Score=108, Expect=2e-23]} {Mouse: ENSMUSG00000022119, Rbm26, RNA binding motif protein 26, [RH, Score=108, Expect=1e-23]} {Dmel: FBgn0002044, swm, second mitotic wave missing, [RH, Score=84.7, Expect=2e-16]} {Celegans: WBGene00015143, B0336.3, [RH, Score=111, Expect=7e-25]} {Smed: dd_Smed_v6_5418_0_1, dd_Smed_v6_5418_0_1, [RH, Score=89.4, Expect=5e-18]} {RNA1509_26401, RNA1509_26676, RNA1509_34363, RNA1509_41059, RNA1509_4654} {RNA1310_2688, RNA1509_26401, RNA1509_26676, RNA1509_34363, RNA1509_41059, RNA1509_4654} {RNA1509_26401, RNA1509_26676, RNA1509_34363, RNA1509_41059, RNA1509_4654, RNA815_1480.1}
14. MligTC455_14347 395 8.24 Mlig455_049858

Neo: -

Age: Up-Up-Down

0.95 - - - - - 0.950 Mlig455_049858 {REF} {Length: 1083} {NoTransDecoderORF} {RNA1509_24589} {RNA1310_17334.1} {RNA815_7422.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA