TomoSeq data search

Data search

Results for MligTC455_23307

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23307

196

4.09

Mlig455_029927

Neo: -

Age: Up-Down-Down

FARP2

Mlig455_029927 {REF} {Length: 6942} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=74.9]; FERM N-terminal domain [PF09379.12, score=56.1]; FERM central domain [PF00373.20, score=53.8]} {Human: ENSG00000006607, FARP2, FERM, ARH/RhoGEF and pleckstrin domain protein 2, [Score=296, Expect=3e-86]; ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [Score=289, Expect=4e-82]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [Score=303, Expect=4e-87]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=371, Expect=4e-105]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=318, Expect=1e-90]} {Smed: dd_Smed_v6_5600_0_1, dd_Smed_v6_5600_0_1, [Score=415, Expect=2e-121]} {RNA1509_17594} {RNA1310_14768} {RNA815_14889}

Cumulative graph for MligTC455_23307

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.97	2.718	0.29459	0.94570
RegionR2	1.292	2.718	0.17524	0.52319
RegionR3	0.773	2.718	0.39138	0.92160
RegionR4	1.317	2.718	0.17136	0.43546
RegionR5	1.31	2.718	0.07332	0.24611
RegionR6	1.636	2.718	0.02790	0.30711
RegionR7	-0.816	2.718	0.98042	1.00000
RegionR8	-0.542	2.718	0.96116	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.199	2.718	0.99994	1.00000
RegenerationR2	0.012	2.718	0.97995	1.00000
RegenerationR3	0.259	2.718	0.66718	0.93614
RegenerationR4	-0.316	2.718	0.62418	0.92200
RegenerationR5	-0.161	2.718	0.75526	0.97346
RegenerationR6	-1.124	2.718	0.07337	0.33851
RegenerationBL	0.959	2.718	0.27720	0.63743
RegenerationTP	1.71	2.718	0.06880	0.42182

Genes with expression patterns similar to MligTC455_23307

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23307	196	4.09	Mlig455_029927	Neo: - Age: Up-Down-Down	FARP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_029927 {REF} {Length: 6942} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=74.9]; FERM N-terminal domain [PF09379.12, score=56.1]; FERM central domain [PF00373.20, score=53.8]} {Human: ENSG00000006607, FARP2, FERM, ARH/RhoGEF and pleckstrin domain protein 2, [Score=296, Expect=3e-86]; ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [Score=289, Expect=4e-82]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [Score=303, Expect=4e-87]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=371, Expect=4e-105]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=318, Expect=1e-90]} {Smed: dd_Smed_v6_5600_0_1, dd_Smed_v6_5600_0_1, [Score=415, Expect=2e-121]} {RNA1509_17594} {RNA1310_14768} {RNA815_14889}
2.	MligTC455_41963	374	7.79	Mlig455_001634	Neo: - Age: - Region-enriched R2: 2.012/0.00223	FOXO4	1.676	-	-	0.715	0.961	-	-	Mlig455_001634 {REF} {Length: 3895} {TRANSSPLICED} {Pfam: Forkhead domain [PF00250.20, score=96.0]} {Human: ENSG00000184481, FOXO4, forkhead box O4, [RH, Score=160, Expect=2e-43]} {Mouse: ENSMUSG00000042903, Foxo4, forkhead box O4, [RH, Score=159, Expect=5e-43]} {Dmel: FBgn0038197, foxo, forkhead box, sub-group O, [RH, Score=157, Expect=8e-42]} {Celegans: WBGene00000912, daf-16, Forkhead box protein O, [RH, Score=147, Expect=4e-39]} {Smed: dd_Smed_v6_3040_0_1, dd_Smed_v6_3040_0_1, [RH, Score=107, Expect=1e-25]} {RNA1509_27960, RNA1509_32478} {RNA1310_20588, RNA1509_27960, RNA1509_32478} {RNA1509_27960, RNA1509_32478, RNA815_24811}
3.	MligTC455_30219	2171	45.24	Mlig455_024942, Mlig455_036959, Mlig455_051025	Neo: - Age: Down-Up-Down		1.657	-	-	0.704	-	0.953	-	Mlig455_024942 {REF} {Length: 834} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} Mlig455_036959 {REF} {Length: 1398} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.9]} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} Mlig455_051025 {REF} {Length: 681} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_34211} {RNA815_2198.1}
4.	MligTC455_49884	798	16.62	Mlig455_038126, Mlig455_039794	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.417 Region-enriched R5: 1.261/0.00614		0.959	-	-	-	-	0.959	-	Mlig455_038126 {REF} {Length: 310} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_33039} {RNA1310_108039.2} {RNA815_54164} Mlig455_039794 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_33039} {RNA1310_108039.1} {RNA815_54164}
5.	MligTC455_47717	665	13.84	Mlig455_004992	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=1.990 Region-enriched R5: 1.208/0.02519		0.957	-	-	-	-	0.957	-	Mlig455_004992 {REF} {Length: 674} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S32 [PF10210.11, score=28.4]} {RNA1509_9857} {RNA1310_44486.1} {RNA815_26211}
6.	MligTC455_24632	15131	315.24	Mlig455_021550	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.301		0.956	-	-	-	-	0.956	-	Mlig455_021550 {REF} {Length: 302} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1623, RNA1509_363} {RNA1310_113178.2, RNA1509_1623, RNA1509_363} {RNA1509_1623, RNA1509_363, RNA815_52026}
7.	MligTC455_42712	1880	39.17	Mlig455_005106, Mlig455_005197	Neo: - Age: Down-Up-Up	PIGM	0.952	-	-	-	-	0.952	-	Mlig455_005106 {REF} {Length: 1971} {TRANSSPLICED} {Pfam: Mannosyltransferase (PIG-M) [PF05007.15, score=176.2]; GPI transamidase subunit PIG-U [PF06728.15, score=26.9]} {Human: ENSG00000143315, PIGM, phosphatidylinositol glycan anchor biosynthesis class M, [RH, Score=181, Expect=9e-51]} {Mouse: ENSMUSG00000050229, Pigm, phosphatidylinositol glycan anchor biosynthesis, class M, [RH, Score=177, Expect=2e-49]} {Dmel: FBgn0034649, PIG-M, Phosphatidylinositol glycan anchor biosynthesis class M, [RH, Score=141, Expect=3e-36]} {Celegans: WBGene00007189, B0491.1, [RH, Score=196, Expect=8e-57]} {Smed: dd_Smed_v6_13168_0_1, dd_Smed_v6_13168_0_1, [RH, Score=214, Expect=5e-64]} {RNA1509_37518, RNA1509_40700} {RNA1310_25088, RNA1509_37518} {RNA1509_37518, RNA815_10384} Mlig455_005197 {REF} {Length: 795} {TRANSSPLICED} {RNA1509_35162, RNA1509_37628} {RNA1310_47467, RNA1509_35162, RNA1509_37628} {RNA1509_35162, RNA1509_37628, RNA815_26331}
8.	MligTC455_24395	1324	27.59	Mlig455_040568	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.657	TMED10	0.951	-	-	-	-	0.951	-	Mlig455_040568 {REF} {Length: 3571} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=132.6]} {Human: ENSG00000170348, TMED10, transmembrane p24 trafficking protein 10, [Score=212, Expect=2e-63]} {Mouse: ENSMUSG00000021248, Tmed10, transmembrane p24 trafficking protein 10, [Score=221, Expect=1e-66]} {Dmel: FBgn0045866, bai, baiser, [Score=187, Expect=8e-55]} {Celegans: WBGene00009829, F47G9.1, [Score=205, Expect=2e-61]} {Smed: dd_Smed_v6_746_0_1, dd_Smed_v6_746_0_1, [Score=241, Expect=7e-75]} {RNA1509_19025, RNA1509_34705} {RNA1310_12048, RNA1509_34705} {RNA1509_34705, RNA815_7357}
9.	MligTC455_53227	1520	31.66	Mlig455_011229	Neo: - Age: Down-Up-Up Region-enriched R5: 1.612/0.00003 Region-enriched R4: 1.099/0.04391	PIN1	0.951	-	-	-	-	0.951	-	Mlig455_011229 {REF} {Length: 727} {TRANSSPLICED} {Pfam: PPIC-type PPIASE domain [PF00639.23, score=87.0]; PPIC-type PPIASE domain [PF13616.8, score=68.4]; WW domain [PF00397.28, score=46.5]; PPIC-type PPIASE domain [PF13145.8, score=27.3]} {Human: ENSG00000127445, PIN1, peptidylprolyl cis/trans isomerase, NIMA-interacting 1, [RH, Score=171, Expect=5e-55]} {Mouse: ENSMUSG00000074997, Pin1rt1, protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, retrogene 1, [RH, Score=168, Expect=6e-54]; ENSMUSG00000032171, Pin1, protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, [RH, Score=166, Expect=5e-53]} {Dmel: FBgn0015379, dod, dodo, [RH, Score=176, Expect=4e-57]} {Celegans: WBGene00022448, pinn-1, Peptidyl-prolyl cis-trans isomerase, [RH, Score=159, Expect=1e-50]} {Smed: dd_Smed_v6_4606_0_1, dd_Smed_v6_4606_0_1, [RH, Score=169, Expect=1e-54]} {RNA1509_47886, RNA1509_49837, RNA1509_53173} {RNA1310_48600, RNA1509_47886, RNA1509_49837, RNA1509_53173} {RNA1509_47886, RNA1509_49837, RNA1509_53173, RNA815_25171}

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