TomoSeq data search

Data search

Results for MligTC455_24395

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24395

1324

27.59

Mlig455_040568

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.657

TMED10

Mlig455_040568 {REF} {Length: 3571} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=132.6]} {Human: ENSG00000170348, TMED10, transmembrane p24 trafficking protein 10, [Score=212, Expect=2e-63]} {Mouse: ENSMUSG00000021248, Tmed10, transmembrane p24 trafficking protein 10, [Score=221, Expect=1e-66]} {Dmel: FBgn0045866, bai, baiser, [Score=187, Expect=8e-55]} {Celegans: WBGene00009829, F47G9.1, [Score=205, Expect=2e-61]} {Smed: dd_Smed_v6_746_0_1, dd_Smed_v6_746_0_1, [Score=241, Expect=7e-75]} {RNA1509_19025, RNA1509_34705} {RNA1310_12048, RNA1509_34705} {RNA1509_34705, RNA815_7357}

Cumulative graph for MligTC455_24395

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.01	4.973	0.99090	1.00000
RegionR2	-0.397	4.973	0.39333	0.78784
RegionR3	-0.43	4.973	0.28637	0.82809
RegionR4	0.838	4.973	0.06330	0.22617
RegionR5	0.901	4.973	0.01062	0.06032
RegionR6	0.052	4.973	0.89601	1.00000
RegionR7	0.471	4.973	0.30124	0.93593
RegionR8	-1.426	4.973	0.05256	0.44696

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.399	4.973	0.75730	1.00000
RegenerationR2	0.318	4.973	0.44126	0.84065
RegenerationR3	0.756	4.973	0.09940	0.50286
RegenerationR4	0.334	4.973	0.45687	0.84541
RegenerationR5	0.136	4.973	0.74445	0.97014
RegenerationR6	0.599	4.973	0.18376	0.51943
RegenerationBL	1.163	4.973	0.01234	0.11375
RegenerationTP	1.763	4.973	0.00080	0.04239

Genes with expression patterns similar to MligTC455_24395

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24395	1324	27.59	Mlig455_040568	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.657	TMED10	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040568 {REF} {Length: 3571} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=132.6]} {Human: ENSG00000170348, TMED10, transmembrane p24 trafficking protein 10, [Score=212, Expect=2e-63]} {Mouse: ENSMUSG00000021248, Tmed10, transmembrane p24 trafficking protein 10, [Score=221, Expect=1e-66]} {Dmel: FBgn0045866, bai, baiser, [Score=187, Expect=8e-55]} {Celegans: WBGene00009829, F47G9.1, [Score=205, Expect=2e-61]} {Smed: dd_Smed_v6_746_0_1, dd_Smed_v6_746_0_1, [Score=241, Expect=7e-75]} {RNA1509_19025, RNA1509_34705} {RNA1310_12048, RNA1509_34705} {RNA1509_34705, RNA815_7357}
2.	MligTC455_24397	2527	52.66	Mlig455_062069	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.467	TMED10	4.327	-	0.981	0.824	0.926	0.758	0.838	Mlig455_062069 {REF} {Length: 1263} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=136.0]} {Human: ENSG00000170348, TMED10, transmembrane p24 trafficking protein 10, [Score=218, Expect=2e-72]} {Mouse: ENSMUSG00000021248, Tmed10, transmembrane p24 trafficking protein 10, [Score=217, Expect=2e-72]} {Dmel: FBgn0045866, bai, baiser, [Score=191, Expect=2e-62]} {Celegans: WBGene00009829, F47G9.1, [Score=205, Expect=6e-68]} {Smed: dd_Smed_v6_746_0_1, dd_Smed_v6_746_0_1, [Score=234, Expect=1e-79]} {RNA1509_3369} {RNA1310_23007} {RNA815_9635}
3.	MligTC455_24394	2044	42.57	Mlig455_008297	Neo: - Age: Up-Up-Down, logFC(26M/2M)=2.928	TMED10	3.437	-	0.708	0.973	0.928	-	0.828	Mlig455_008297 {REF} {Length: 2777} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=80.8]} {Human: ENSG00000170348, TMED10, transmembrane p24 trafficking protein 10, [Score=155, Expect=8e-43]} {Mouse: ENSMUSG00000021248, Tmed10, transmembrane p24 trafficking protein 10, [Score=158, Expect=5e-44]} {Dmel: FBgn0045866, bai, baiser, [Score=142, Expect=1e-38]} {Celegans: WBGene00009829, F47G9.1, [Score=150, Expect=7e-42]} {Smed: dd_Smed_v6_746_0_1, dd_Smed_v6_746_0_1, [Score=175, Expect=1e-50]} {RNA1509_6556} {RNA1310_23007} {RNA815_9635}
4.	MligTC455_45072	2260	47.07	Mlig455_050675, Mlig455_069624	Neo: Int S/G2/M Age: logFC(26M/2M)=0.149 Regeneration-upregulated BL: 1.167 Regeneration-enriched BL: 1.167	VARS	0.954	-	-	0.954	-	-	-	Mlig455_050675 {REF} {Length: 4260} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=648.0]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=127.0]; tRNA synthetases class I (M) [PF09334.13, score=45.9]; Leucyl-tRNA synthetase, Domain 2 [PF13603.8, score=32.8]; Valyl tRNA synthetase tRNA binding arm [PF10458.11, score=25.6]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=21.8]; Glutathione S-transferase, C-terminal domain [PF13410.8, score=21.3]; Glutathione S-transferase, C-terminal domain [PF14497.8, score=19.0]} {Human: ENSG00000231945, VARS, valyl-tRNA synthetase, [RH, Score=1100, Expect=0.0]; ENSG00000231116, VARS, valyl-tRNA synthetase, [RH, Score=1099, Expect=0.0]; ENSG00000096171, VARS, valyl-tRNA synthetase, [RH, Score=1099, Expect=0.0]; ENSG00000224264, VARS, valyl-tRNA synthetase, [RH, Score=1099, Expect=0.0]; ENSG00000226589, VARS, valyl-tRNA synthetase, [RH, Score=1099, Expect=0.0]; ENSG00000204394, VARS, valyl-tRNA synthetase, [RH, Score=1099, Expect=0.0]} {Mouse: ENSMUSG00000007029, Vars, valyl-tRNA synthetase, [RH, Score=1098, Expect=0.0]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [RH, Score=1114, Expect=0.0]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [RH, Score=1061, Expect=0.0]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [RH, Score=992, Expect=0.0]} {RNA1509_2097} {RNA1310_2033, RNA1509_2097} {RNA1509_2097, RNA815_577} Mlig455_069624 {REF} {Length: 4147} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=633.6]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=127.0]; tRNA synthetases class I (M) [PF09334.13, score=46.1]; Leucyl-tRNA synthetase, Domain 2 [PF13603.8, score=32.8]; Valyl tRNA synthetase tRNA binding arm [PF10458.11, score=25.7]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=21.9]; Glutathione S-transferase, C-terminal domain [PF13410.8, score=21.4]; Glutathione S-transferase, C-terminal domain [PF14497.8, score=19.0]} {Human: ENSG00000231945, VARS, valyl-tRNA synthetase, [Score=1042, Expect=0.0]; ENSG00000096171, VARS, valyl-tRNA synthetase, [Score=1041, Expect=0.0]; ENSG00000231116, VARS, valyl-tRNA synthetase, [Score=1041, Expect=0.0]; ENSG00000224264, VARS, valyl-tRNA synthetase, [Score=1041, Expect=0.0]; ENSG00000226589, VARS, valyl-tRNA synthetase, [Score=1041, Expect=0.0]; ENSG00000204394, VARS, valyl-tRNA synthetase, [Score=1041, Expect=0.0]} {Mouse: ENSMUSG00000007029, Vars, valyl-tRNA synthetase, [Score=1046, Expect=0.0]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [RH, Score=1053, Expect=0.0]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [RH, Score=1012, Expect=0.0]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [RH, Score=958, Expect=0.0]} {RNA1509_2097} {RNA1310_2033} {RNA815_577}
5.	MligTC455_50943	587	12.24	Mlig455_006561, Mlig455_006674, Mlig455_006724	Neo: Int S/G2/M Age: - Region-enriched R4: 2.976/0.02586 Region-enriched R5: 2.717/0.01018	DNAJA4	0.952	-	-	-	-	-	0.952	Mlig455_006561 {REF} {Length: 422} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=64.1]; CSL zinc finger [PF05207.15, score=23.2]} {Human: ENSG00000140403, DNAJA4, DnaJ heat shock protein family (Hsp40) member A4, [Score=65.5, Expect=3e-12]; ENSG00000086061, DNAJA1, DnaJ heat shock protein family (Hsp40) member A1, [Score=64.7, Expect=2e-11]} {Mouse: ENSMUSG00000032285, Dnaja4, DnaJ heat shock protein family (Hsp40) member A4, [Score=65.1, Expect=9e-12]; ENSMUSG00000028410, Dnaja1, DnaJ heat shock protein family (Hsp40) member A1, [Score=63.2, Expect=2e-12]} {Dmel: FBgn0052641, CG32641, [Score=70.5, Expect=4e-15]} {Celegans: WBGene00001034, dnj-16, DNaJ domain (Prokaryotic heat shock protein), [Score=67.0, Expect=1e-12]} {Smed: dd_Smed_v6_1779_0_1, dd_Smed_v6_1779_0_1, [Score=62.0, Expect=1e-11]} {RNA1509_30468} {RNA1310_52004.1} {RNA815_25198} Mlig455_006674 {REF} {Length: 422} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=64.1]; CSL zinc finger [PF05207.15, score=23.2]} {Human: ENSG00000140403, DNAJA4, DnaJ heat shock protein family (Hsp40) member A4, [Score=65.5, Expect=3e-12]; ENSG00000086061, DNAJA1, DnaJ heat shock protein family (Hsp40) member A1, [Score=64.7, Expect=2e-11]} {Mouse: ENSMUSG00000032285, Dnaja4, DnaJ heat shock protein family (Hsp40) member A4, [Score=65.1, Expect=9e-12]; ENSMUSG00000028410, Dnaja1, DnaJ heat shock protein family (Hsp40) member A1, [Score=63.2, Expect=2e-12]} {Dmel: FBgn0052641, CG32641, [Score=70.5, Expect=4e-15]} {Celegans: WBGene00001034, dnj-16, DNaJ domain (Prokaryotic heat shock protein), [Score=67.0, Expect=1e-12]} {Smed: dd_Smed_v6_1779_0_1, dd_Smed_v6_1779_0_1, [Score=62.0, Expect=1e-11]} {RNA1509_30468} {RNA1310_52004.1} {RNA815_25198} Mlig455_006724 {REF} {Length: 702} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=65.2]; CSL zinc finger [PF05207.15, score=24.6]} {Human: ENSG00000140403, DNAJA4, DnaJ heat shock protein family (Hsp40) member A4, [Score=65.9, Expect=9e-13]; ENSG00000086061, DNAJA1, DnaJ heat shock protein family (Hsp40) member A1, [Score=65.1, Expect=4e-12]; ENSG00000077232, DNAJC10, DnaJ heat shock protein family (Hsp40) member C10, [Score=63.2, Expect=3e-11]} {Mouse: ENSMUSG00000032285, Dnaja4, DnaJ heat shock protein family (Hsp40) member A4, [Score=65.5, Expect=2e-12]; ENSMUSG00000028410, Dnaja1, DnaJ heat shock protein family (Hsp40) member A1, [Score=63.9, Expect=6e-13]} {Dmel: FBgn0052641, CG32641, [Score=69.7, Expect=3e-15]} {Celegans: WBGene00001034, dnj-16, DNaJ domain (Prokaryotic heat shock protein), [Score=65.1, Expect=2e-12]} {Smed: dd_Smed_v6_147_0_1, dd_Smed_v6_147_0_1, [Score=61.6, Expect=2e-11]} {RNA1509_30468} {RNA1310_52004.1, RNA1509_30468} {RNA1509_30468, RNA815_25198}
6.	MligTC455_23307	196	4.09	Mlig455_029927	Neo: - Age: Up-Down-Down	FARP2	0.951	-	-	-	-	0.951	-	Mlig455_029927 {REF} {Length: 6942} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=74.9]; FERM N-terminal domain [PF09379.12, score=56.1]; FERM central domain [PF00373.20, score=53.8]} {Human: ENSG00000006607, FARP2, FERM, ARH/RhoGEF and pleckstrin domain protein 2, [Score=296, Expect=3e-86]; ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [Score=289, Expect=4e-82]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [Score=303, Expect=4e-87]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=371, Expect=4e-105]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=318, Expect=1e-90]} {Smed: dd_Smed_v6_5600_0_1, dd_Smed_v6_5600_0_1, [Score=415, Expect=2e-121]} {RNA1509_17594} {RNA1310_14768} {RNA815_14889}

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