M. lignano Tomo-Seq
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Results for MligTC455_23319

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23319 13 0.28 Mlig455_025003

Neo: -

Age: -

 Mlig455_025003 {REF} {Length: 228} {NoTransDecoderORF}

Cumulative graph for MligTC455_23319

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.762 0.651 0.99994 1.00000
RegionR2 3.098 0.651 0.99992 1.00000
RegionR3 0.413 0.651 0.99995 1.00000
RegionR4 -3.186 0.651 0.99982 1.00000
RegionR5 -0.906 0.651 0.99992 1.00000
RegionR6 -0.038 0.651 0.99996 1.00000
RegionR7 1.374 0.651 0.99998 1.00000
RegionR8 2.008 0.651 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.671 0.651 0.99998 1.00000
RegenerationR2 1.659 0.651 0.99998 1.00000
RegenerationR3 1.852 0.651 0.99993 1.00000
RegenerationR4 2.858 0.651 0.99956 1.00000
RegenerationR5 -0.337 0.651 0.99993 1.00000
RegenerationR6 2.612 0.651 0.99955 1.00000
RegenerationBL -1.918 0.651 0.99993 1.00000
RegenerationTP -1.395 0.651 0.99994 1.00000


Genes with expression patterns similar to MligTC455_23319

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23319 13 0.28 Mlig455_025003

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_025003 {REF} {Length: 228} {NoTransDecoderORF}
2. MligTC455_29152 33 0.68 Mlig455_018706

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_018706 {REF} {Length: 1786} {RNA1509_38365} {RNA1310_54025} {RNA815_28950}
3. MligTC455_17679 365 7.59 Mlig455_007359, Mlig455_066674

Neo: -

Age: -

Region-enriched R2: 2.744/0.00362

 0.978 - - - - 0.978 -

Mlig455_007359 {REF} {Length: 1638} {RNA1509_18138} {RNA1310_24629} {RNA815_31762}

Mlig455_066674 {REF} {Length: 1869} {RNA1509_18138, RNA1509_36034} {RNA1310_24629, RNA1509_18138, RNA1509_36034} {RNA1509_18138, RNA1509_36034, RNA815_31762}
4. MligTC455_32073 43 0.9 Mlig455_043621

Neo: Irradiation

Age: -

Region-enriched R4: 3.888/0.00237

 0.969 - - - - 0.969 - Mlig455_043621 {REF} {Length: 2838} {RNA1509_45511} {RNA1310_28603.1} {RNA815_29511.1}
5. MligTC455_50416 236 4.91 Mlig455_020155

Neo: -

Age: logFC(26M/2M)=-0.515

 ANK1 0.965 - - - - 0.965 - Mlig455_020155 {REF} {Length: 7072} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=370.4]; Ankyrin repeat [PF00023.32, score=241.0]; Ankyrin repeat [PF13606.8, score=233.7]; Ankyrin repeats (many copies) [PF13637.8, score=228.4]; Ankyrin repeats (many copies) [PF13857.8, score=209.7]; Mab-21 protein [PF03281.16, score=35.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=333, Expect=3e-92]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=322, Expect=4e-89]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=290, Expect=2e-78]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=288, Expect=5e-78]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=283, Expect=4e-80]} {RNA1509_34872} {RNA1310_938, RNA1509_34872} {RNA1509_34872, RNA815_1787.1}
6. MligTC455_24339 79 1.65 Mlig455_019707

Neo: -

Age: -

 ICMT 0.96 - - - - 0.960 - Mlig455_019707 {REF} {Length: 2433} {TRANSSPLICED} {Pfam: Isoprenylcysteine carboxyl methyltransferase (ICMT) family [PF04140.16, score=95.0]; Phospholipid methyltransferase [PF04191.15, score=39.8]; NnrU protein [PF07298.13, score=20.1]} {Human: ENSG00000116237, ICMT, isoprenylcysteine carboxyl methyltransferase, [Score=204, Expect=7e-65]} {Mouse: ENSMUSG00000039662, Icmt, isoprenylcysteine carboxyl methyltransferase, [Score=206, Expect=2e-65]} {Dmel: FBgn0036336, ste14, isoprenylcysteine carboxylmethyltransferase, [Score=183, Expect=9e-57]} {Celegans: WBGene00019710, M01E11.1, Protein-S-isoprenylcysteine O-methyltransferase, [Score=187, Expect=2e-58]} {Smed: dd_Smed_v6_4744_0_1, dd_Smed_v6_4744_0_1, [Score=174, Expect=1e-53]} {RNA1310_32789.1} {RNA815_15140}
7. MligTC455_23662 285 5.95 Mlig455_025104

Neo: Irradiation

Age: -

Region-specific R4: 5.419

Region-enriched R4: 3.777/0.00001

 0.958 - - - - 0.958 - Mlig455_025104 {REF} {Length: 4467} {RNA1509_23438} {RNA1310_48896, RNA1509_23438}
8. MligTC455_24791 154 3.21 Mlig455_045423, Mlig455_065749

Neo: -

Age: -

 PCDH1, PCDHGB5 0.958 - - - - 0.958 -

Mlig455_045423 {REF} {Length: 4481} {Pfam: Cadherin domain [PF00028.19, score=229.5]; Cadherin-like [PF16184.7, score=35.1]; Cadherin-like [PF08266.14, score=27.4]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=222, Expect=2e-58]; ENSG00000184226, PCDH9, protocadherin 9, [Score=218, Expect=3e-57]; ENSG00000250120, PCDHA10, protocadherin alpha 10, [Score=217, Expect=1e-57]; ENSG00000249158, PCDHA11, protocadherin alpha 11, [Score=213, Expect=9e-57]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=226, Expect=3e-60]; ENSMUSG00000103770, Pcdha9, protocadherin alpha 9, [Score=219, Expect=5e-58]; ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=217, Expect=5e-57]} {Dmel: FBgn0284247, ds, dachsous, [Score=190, Expect=2e-48]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=170, Expect=2e-42]} {Smed: dd_Smed_v6_11579_0_1, dd_Smed_v6_11579_0_1, [Score=259, Expect=2e-71]} {RNA1509_44071} {RNA1310_13032} {RNA815_20533}

Mlig455_065749 {REF} {Length: 3579} {Pfam: Cadherin domain [PF00028.19, score=148.0]; Cadherin-like [PF16184.7, score=24.4]; Procyclic acidic repetitive protein (PARP) [PF05887.13, score=22.8]} {Human: ENSG00000276547, PCDHGB5, protocadherin gamma subfamily B, 5, [Score=161, Expect=5e-40]; ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=155, Expect=9e-38]; ENSG00000253910, PCDHGB2, protocadherin gamma subfamily B, 2, [Score=155, Expect=4e-38]} {Mouse: ENSMUSG00000102543, Pcdhgc5, protocadherin gamma subfamily C, 5, [Score=159, Expect=2e-39]; ENSMUSG00000103749, Pcdhgb5, protocadherin gamma subfamily B, 5, [Score=155, Expect=2e-38]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=153, Expect=1e-37]} {Dmel: FBgn0284247, ds, dachsous, [Score=146, Expect=2e-35]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=113, Expect=3e-25]} {Smed: dd_Smed_v6_11579_0_1, dd_Smed_v6_11579_0_1, [Score=197, Expect=4e-52]} {RNA1509_44071} {RNA1310_21522} {RNA815_37516}
9. MligTC455_07970 56 1.17 Mlig455_033539

Neo: -

Age: -

 ZNF142 0.953 - - - - 0.953 - Mlig455_033539 {REF} {Length: 3927} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=51.2]; Zinc finger, C2H2 type [PF00096.28, score=45.1]; Zinc-finger double domain [PF13465.8, score=44.1]; C2H2-type zinc finger [PF13894.8, score=19.6]} {Human: ENSG00000115568, ZNF142, zinc finger protein 142, [Score=107, Expect=2e-23]} {Mouse: ENSMUSG00000026135, Zfp142, zinc finger protein 142, [Score=80.9, Expect=3e-15]; ENSMUSG00000029249, Rest, RE1-silencing transcription factor, [Score=79.3, Expect=8e-15]} {Dmel: FBgn0001180, hb, hunchback, [RH, Score=189, Expect=4e-51]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [RH, Score=174, Expect=2e-45]} {Smed: dd_Smed_v6_47627_0_1, dd_Smed_v6_47627_0_1, [Score=296, Expect=9e-94]} {RNA1310_53058} {RNA815_35691}

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