TomoSeq data search

Data search

Results for MligTC455_50416

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50416

236

4.91

Mlig455_020155

Neo: -

Age: logFC(26M/2M)=-0.515

ANK1

Mlig455_020155 {REF} {Length: 7072} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=370.4]; Ankyrin repeat [PF00023.32, score=241.0]; Ankyrin repeat [PF13606.8, score=233.7]; Ankyrin repeats (many copies) [PF13637.8, score=228.4]; Ankyrin repeats (many copies) [PF13857.8, score=209.7]; Mab-21 protein [PF03281.16, score=35.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=333, Expect=3e-92]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=322, Expect=4e-89]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=290, Expect=2e-78]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=288, Expect=5e-78]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=283, Expect=4e-80]} {RNA1509_34872} {RNA1310_938, RNA1509_34872} {RNA1509_34872, RNA815_1787.1}

Cumulative graph for MligTC455_50416

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.063	2.691	0.39783	1.00000
RegionR2	0.791	2.691	0.20900	0.57225
RegionR3	0.266	2.691	0.61419	1.00000
RegionR4	-0.426	2.691	0.46263	0.79031
RegionR5	-0.445	2.691	0.40040	0.75761
RegionR6	0.924	2.691	0.07809	0.51831
RegionR7	-0.683	2.691	0.42602	1.00000
RegionR8	-1.489	2.691	0.23045	0.84346

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.256	2.691	0.07089	0.75259
RegenerationR2	-0.405	2.691	0.41406	0.82314
RegenerationR3	-0.625	2.691	0.26806	0.70228
RegenerationR4	-0.088	2.691	0.87253	1.00000
RegenerationR5	-0.942	2.691	0.10405	0.48888
RegenerationR6	-0.87	2.691	0.11747	0.42160
RegenerationBL	-0.365	2.691	0.70911	1.00000
RegenerationTP	0.321	2.691	0.76541	1.00000

Genes with expression patterns similar to MligTC455_50416

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50416	236	4.91	Mlig455_020155	Neo: - Age: logFC(26M/2M)=-0.515	ANK1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020155 {REF} {Length: 7072} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=370.4]; Ankyrin repeat [PF00023.32, score=241.0]; Ankyrin repeat [PF13606.8, score=233.7]; Ankyrin repeats (many copies) [PF13637.8, score=228.4]; Ankyrin repeats (many copies) [PF13857.8, score=209.7]; Mab-21 protein [PF03281.16, score=35.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=333, Expect=3e-92]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=322, Expect=4e-89]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=290, Expect=2e-78]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=288, Expect=5e-78]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=283, Expect=4e-80]} {RNA1509_34872} {RNA1310_938, RNA1509_34872} {RNA1509_34872, RNA815_1787.1}
2.	MligTC455_16620	125	2.6	Mlig455_020409, Mlig455_020462	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.701		1.844	-	-	-	-	0.877	0.967	Mlig455_020409 {REF} {Length: 5854} {RNA1509_11606, RNA1509_42815, RNA1509_54786, RNA1509_56098} {RNA1310_6063.3, RNA1509_11606, RNA1509_42815, RNA1509_54786, RNA1509_56098} {RNA1509_11606, RNA1509_42815, RNA1509_54786, RNA1509_56098, RNA815_1093} Mlig455_020462 {REF} {Length: 2324} {Pfam: Papain family cysteine protease [PF00112.25, score=20.5]} {RNA1509_11606} {RNA1310_6063.1} {RNA815_1093}
3.	MligTC455_47502	210	4.37	Mlig455_066363	Neo: - Age: -	CHD1L	1.714	-	-	-	0.756	-	0.958	Mlig455_066363 {REF} {Length: 2510} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=61.2]; DNA ligase 3 BRCT domain [PF16759.7, score=30.5]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=22.6]; ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=19.6]} {Human: ENSG00000131778, CHD1L, chromodomain helicase DNA binding protein 1 like, [Score=431, Expect=3e-142]} {Mouse: ENSMUSG00000028089, Chd1l, chromodomain helicase DNA binding protein 1-like, [Score=426, Expect=8e-137]} {Dmel: FBgn0266557, kis, kismet, [Score=189, Expect=2e-49]} {Celegans: WBGene00010369, chd-1, Chromodomain and Helicase Domain protein, [Score=182, Expect=9e-48]} {Smed: dd_Smed_v6_17704_0_1, dd_Smed_v6_17704_0_1, [Score=349, Expect=5e-108]} {RNA1509_30176} {RNA1310_21086.1} {RNA815_6355}
4.	MligTC455_27036	833	17.36	Mlig455_008299, Mlig455_042963, Mlig455_048586, Mlig455_051917, Mlig455_059150, Mlig455_060138, Mlig455_067251	Neo: - Age: -		0.98	-	-	-	-	0.980	-	Mlig455_008299 {REF} {Length: 2815} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_811} {RNA815_207.1} Mlig455_042963 {REF} {Length: 2378} {RNA1509_6640} {RNA1310_38395} {RNA815_207.1} Mlig455_048586 {REF} {Length: 2430} {RNA1509_45658} {RNA1310_14625.1} {RNA815_19998} Mlig455_051917 {REF} {Length: 2040} {Pfam: Replication protein A OB domain [PF16900.7, score=48.0]} {RNA1509_6640} {RNA1310_4236} {RNA815_207.1} Mlig455_059150 {REF} {Length: 1272} {Pfam: Replication protein A OB domain [PF16900.7, score=49.4]} {RNA1509_6640} {RNA1310_4236} {RNA815_207.1} Mlig455_060138 {REF} {Length: 2498} {RNA1509_6640} {RNA1310_38395} {RNA815_207.1} Mlig455_067251 {REF} {Length: 203} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_60233} {RNA815_207.1}
5.	MligTC455_52851	150	3.12	Mlig455_019167	Neo: - Age: -	IPP	0.974	-	-	-	-	-	0.974	Mlig455_019167 {REF} {Length: 4194} {Pfam: Kelch motif [PF13964.8, score=59.7]; BTB/POZ domain [PF00651.33, score=59.3]; Kelch motif [PF01344.27, score=43.5]; PB1 domain [PF00564.26, score=38.1]; BTB And C-terminal Kelch [PF07707.17, score=31.3]; Kelch motif [PF13854.8, score=29.1]; Galactose oxidase, central domain [PF13418.8, score=21.0]} {Human: ENSG00000197429, IPP, intracisternal A particle-promoted polypeptide, [Score=108, Expect=1e-23]} {Mouse: ENSMUSG00000028696, Ipp, IAP promoted placental gene, [Score=116, Expect=2e-26]} {Dmel: FBgn0034396, CG15097, [Score=101, Expect=1e-21]} {Celegans: WBGene00002184, kel-1, KELch-repeat containing protein; Kel-1 protein, [Score=94.0, Expect=2e-19]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=112, Expect=2e-25]} {RNA1509_34974} {RNA1310_11834, RNA1509_34974} {RNA1509_34974, RNA815_22708}
6.	MligTC455_27035	158	3.29	Mlig455_005901, Mlig455_063637	Neo: - Age: logFC(26M/2M)=0.334 Region-enriched R2: 2.799/0.04066		0.967	-	-	-	-	0.967	-	Mlig455_005901 {REF} {Length: 348} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_60233} {RNA815_207.1} Mlig455_063637 {REF} {Length: 2011} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=56.4]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=19.8]} {Celegans: WBGene00021577, Y46B2A.2, [Score=72.4, Expect=3e-13]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [Score=136, Expect=6e-36]} {RNA1509_24827} {RNA1310_24000} {RNA815_6273}
7.	MligTC455_23319	13	0.28	Mlig455_025003	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_025003 {REF} {Length: 228} {NoTransDecoderORF}
8.	MligTC455_27098	364	7.58	Mlig455_038070	Neo: - Age: Up-Down-Down, logFC(26M/2M)=1.628	SAA1	0.964	-	-	-	-	-	0.964	Mlig455_038070 {REF} {Length: 2774} {Pfam: Serum amyloid A protein [PF00277.20, score=66.0]} {Human: ENSG00000173432, SAA1, serum amyloid A1, [RH, Score=53.9, Expect=2e-09]; ENSG00000134339, SAA2, serum amyloid A2, [RH, Score=53.1, Expect=4e-09]} {Mouse: ENSMUSG00000040026, Saa3, serum amyloid A 3, [RH, Score=61.2, Expect=2e-12]; ENSMUSG00000074115, Saa1, serum amyloid A 1, [RH, Score=60.1, Expect=6e-12]; ENSMUSG00000057465, Saa2, serum amyloid A 2, [RH, Score=59.7, Expect=4e-12]} {RNA1509_11884, RNA1509_32696, RNA1509_34673} {RNA1310_25670.1, RNA1509_32696, RNA1509_34673} {RNA1509_32696, RNA1509_34673, RNA815_10405}
9.	MligTC455_32073	43	0.9	Mlig455_043621	Neo: Irradiation Age: - Region-enriched R4: 3.888/0.00237		0.963	-	-	-	-	0.963	-	Mlig455_043621 {REF} {Length: 2838} {RNA1509_45511} {RNA1310_28603.1} {RNA815_29511.1}
10.	MligTC455_35283	351	7.32	Mlig455_008550	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_008550 {REF} {Length: 998} {NoTransDecoderORF} {RNA1310_50962}
11.	MligTC455_17679	365	7.59	Mlig455_007359, Mlig455_066674	Neo: - Age: - Region-enriched R2: 2.744/0.00362		0.959	-	-	-	-	0.959	-	Mlig455_007359 {REF} {Length: 1638} {RNA1509_18138} {RNA1310_24629} {RNA815_31762} Mlig455_066674 {REF} {Length: 1869} {RNA1509_18138, RNA1509_36034} {RNA1310_24629, RNA1509_18138, RNA1509_36034} {RNA1509_18138, RNA1509_36034, RNA815_31762}
12.	MligTC455_30224	418	8.7	Mlig455_045910, Mlig455_046402, Mlig455_049019	Neo: Irradiation Age: Down-Down-Down	PIF1	0.957	-	-	-	-	0.957	-	Mlig455_045910 {REF} {Length: 11950} {Pfam: PIF1-like helicase [PF05970.16, score=335.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.8]; AAA domain [PF13604.8, score=45.9]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=120, Expect=3e-27]} {Celegans: WBGene00022692, ZK250.9, [Score=705, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=3e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} Mlig455_046402 {REF} {Length: 7812} {Pfam: PIF1-like helicase [PF05970.16, score=335.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.8]; AAA domain [PF13604.8, score=45.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=120, Expect=2e-27]} {Celegans: WBGene00022692, ZK250.9, [Score=736, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=2e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} Mlig455_049019 {REF} {Length: 5908} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=335.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.7]; AAA domain [PF13604.8, score=46.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.3]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=121, Expect=7e-28]} {Celegans: WBGene00022692, ZK250.9, [Score=734, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=117, Expect=1e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}
13.	MligTC455_25909	483	10.07	Mlig455_015480, Mlig455_040389	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_015480 {REF} {Length: 1023} {NoTransDecoderORF} {RNA1509_27251} {RNA1310_105013.1} {RNA815_14120.1} Mlig455_040389 {REF} {Length: 84} {NoTransDecoderORF} {RNA1509_27251} {RNA1310_26700} {RNA815_14120.1}
14.	MligTC455_39981	457	9.52	Mlig455_028079	Neo: Int S/G2/M Age: -	MRPL17	0.955	-	-	-	-	-	0.955	Mlig455_028079 {REF} {Length: 1342} {TRANSSPLICED} {Pfam: Ribosomal protein L17 [PF01196.21, score=29.7]} {Human: ENSG00000158042, MRPL17, mitochondrial ribosomal protein L17, [RH, Score=57.4, Expect=3e-10]} {Mouse: ENSMUSG00000030879, Mrpl17, mitochondrial ribosomal protein L17, [RH, Score=57.8, Expect=2e-10]} {Dmel: FBgn0035122, mRpL17, mitochondrial ribosomal protein L17, [RH, Score=67.0, Expect=4e-14]} {Smed: dd_Smed_v6_3289_0_1, dd_Smed_v6_3289_0_1, [RH, Score=105, Expect=1e-28]} {RNA1509_21955, RNA1509_25190} {RNA1310_25456, RNA1509_21955, RNA1509_25190} {RNA1509_21955, RNA1509_25190, RNA815_9956}
15.	MligTC455_39607	305	6.35	Mlig455_049946	Neo: - Age: -	COL4A3BP	0.954	-	-	-	-	0.954	-	Mlig455_049946 {REF} {Length: 3668} {TRANSSPLICED} {Pfam: START domain [PF01852.21, score=65.9]; PH domain [PF00169.31, score=38.7]; Pleckstrin homology domain [PF15409.8, score=32.5]; Pleckstrin homology domain [PF15413.8, score=22.4]} {Human: ENSG00000113163, COL4A3BP, collagen type IV alpha 3 binding protein, [RH, Score=273, Expect=4e-84]} {Mouse: ENSMUSG00000021669, Col4a3bp, collagen, type IV, alpha 3 (Goodpasture antigen) binding protein, [Score=283, Expect=1e-85]} {Dmel: FBgn0027569, cert, ceramide transfer protein, [Score=261, Expect=2e-77]} {Celegans: WBGene00015646, mlt-10, [RH, Score=174, Expect=1e-45]} {Smed: dd_Smed_v6_5076_0_1, dd_Smed_v6_5076_0_1, [Score=174, Expect=2e-45]} {RNA1509_43762} {RNA1310_10709} {RNA815_11268}
16.	MligTC455_46144	230	4.8	Mlig455_037529	Neo: - Age: logFC(26M/2M)=-0.234	PDS5A	0.954	-	-	-	-	0.954	-	Mlig455_037529 {REF} {Length: 7763} {TRANSSPLICED} {Pfam: FANCI solenoid 2 [PF14676.8, score=19.2]} {Human: ENSG00000121892, PDS5A, PDS5 cohesin associated factor A, [RH, Score=422, Expect=3e-123]; ENSG00000083642, PDS5B, PDS5 cohesin associated factor B, [RH, Score=421, Expect=2e-122]} {Mouse: ENSMUSG00000029202, Pds5a, PDS5 cohesin associated factor A, [RH, Score=426, Expect=1e-124]} {Dmel: FBgn0260012, pds5, precocious dissociation of sisters 5, [Score=339, Expect=7e-96]} {Smed: dd_Smed_v6_6701_1_3, dd_Smed_v6_6701_1_3, [Score=251, Expect=6e-67]} {RNA1509_7371} {RNA1310_1423.1} {RNA815_501}
17.	MligTC455_28769	419	8.73	Mlig455_005469, Mlig455_012316, Mlig455_013477, Mlig455_021486, Mlig455_023945, Mlig455_036366, Mlig455_052402, Mlig455_054932, Mlig455_058835, Mlig455_068846	Neo: - Age: Up-Down-Down Region-enriched R2: 3.275/0.00067	ANK1	0.952	-	-	-	-	0.952	-	Mlig455_005469 {REF} {Length: 1049} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_5479.1} {RNA815_3258.1} Mlig455_012316 {REF} {Length: 1201} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_013477 {REF} {Length: 259} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_28603.1} {RNA815_22101.2} Mlig455_021486 {REF} {Length: 1079} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_023945 {REF} {Length: 7596} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=353.3]; Ankyrin repeat [PF00023.32, score=292.6]; Ankyrin repeats (many copies) [PF13637.8, score=291.0]; Ankyrin repeat [PF13606.8, score=241.5]; Ankyrin repeats (many copies) [PF13857.8, score=236.3]; Mab-21 protein [PF03281.16, score=20.4]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=306, Expect=9e-85]; ENSG00000145362, ANK2, ankyrin 2, [Score=295, Expect=2e-81]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=304, Expect=3e-84]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=290, Expect=3e-80]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=305, Expect=7e-85]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=302, Expect=6e-86]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=291, Expect=2e-83]} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1} Mlig455_036366 {REF} {Length: 2658} {RNA1509_23537} {RNA1310_28603.1} {RNA815_10479} Mlig455_052402 {REF} {Length: 1301} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_054932 {REF} {Length: 1170} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_5479.1} {RNA815_3258.1} Mlig455_058835 {REF} {Length: 1220} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_5479.1} {RNA815_3258.1} Mlig455_068846 {REF} {Length: 288} {RNA1509_2515} {RNA1310_28603.1} {RNA815_22101.2}
18.	MligTC455_17936	83	1.72	Mlig455_015624	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_015624 {REF} {Length: 700} {RNA1509_39987} {RNA1310_11976} {RNA815_1768.1}
19.	MligTC455_37686	51	1.06	Mlig455_027755	Neo: - Age: logFC(26M/2M)=-0.218	DNALI1	0.95	-	-	-	-	-	0.950	Mlig455_027755 {REF} {Length: 2419} {Pfam: Axonemal dynein light chain [PF10211.11, score=302.7]; Calcium-activated SK potassium channel [PF03530.16, score=91.8]} {Human: ENSG00000163879, DNALI1, dynein axonemal light intermediate chain 1, [RH, Score=392, Expect=1e-131]} {Mouse: ENSMUSG00000042707, Dnali1, dynein, axonemal, light intermediate polypeptide 1, [RH, Score=385, Expect=3e-129]} {Dmel: FBgn0037962, CG6971, [RH, Score=281, Expect=2e-89]} {Celegans: WBGene00018307, dyla-1, DYnein Light chain, Axonemal p28 type, [RH, Score=173, Expect=6e-49]} {Smed: dd_Smed_v6_4453_0_1, dd_Smed_v6_4453_0_1, [RH, Score=410, Expect=1e-139]} {RNA1509_2358} {RNA1310_27099} {RNA815_9783}

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