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Results for MligTC455_23342

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23342 53 1.10 Mlig455_050792

Neo: -

Age: Down-Up-Down

 SHOC2 Mlig455_050792 {REF} {Length: 3211} {Pfam: Leucine rich repeat [PF13855.8, score=52.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=34.7]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=72.8, Expect=2e-13]; ENSG00000188306, LRRIQ4, leucine rich repeats and IQ motif containing 4, [Score=69.3, Expect=2e-12]; ENSG00000033122, LRRC7, leucine rich repeat containing 7, [Score=69.3, Expect=3e-12]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=72.8, Expect=9e-14]; ENSMUSG00000028176, Lrrc7, leucine rich repeat containing 7, [Score=70.9, Expect=6e-13]} {Dmel: FBgn0033984, Lap1, [Score=84.3, Expect=1e-17]} {Celegans: WBGene00021533, Y42G9A.3, [Score=65.1, Expect=1e-11]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=77.0, Expect=2e-15]} {RNA1509_15990} {RNA1310_35662} {RNA815_28491}

Cumulative graph for MligTC455_23342

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.922 1.373 0.24158 0.88859
RegionR2 -0.575 1.373 0.97716 1.00000
RegionR3 0.845 1.373 0.30425 0.84579
RegionR4 1.375 1.373 0.20011 0.47953
RegionR5 1.183 1.373 0.13188 0.36954
RegionR6 -0.089 1.373 0.88596 1.00000
RegionR7 -0.03 1.373 0.94876 1.00000
RegionR8 -5.632 1.373 0.04022 0.39307

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.983 1.373 0.48480 1.00000
RegenerationR2 2.091 1.373 0.03981 0.33011
RegenerationR3 1.525 1.373 0.12457 0.54527
RegenerationR4 1.876 1.373 0.09840 0.48669
RegenerationR5 1.12 1.373 0.18158 0.61123
RegenerationR6 0.949 1.373 0.46097 0.77851
RegenerationBL -0.74 1.373 1.00000 1.00000
RegenerationTP 2.42 1.373 0.28702 0.73316


Genes with expression patterns similar to MligTC455_23342

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23342 53 1.1 Mlig455_050792

Neo: -

Age: Down-Up-Down

 SHOC2 4 1.000 1.000 - 1.000 - 1.000 Mlig455_050792 {REF} {Length: 3211} {Pfam: Leucine rich repeat [PF13855.8, score=52.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=34.7]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=72.8, Expect=2e-13]; ENSG00000188306, LRRIQ4, leucine rich repeats and IQ motif containing 4, [Score=69.3, Expect=2e-12]; ENSG00000033122, LRRC7, leucine rich repeat containing 7, [Score=69.3, Expect=3e-12]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=72.8, Expect=9e-14]; ENSMUSG00000028176, Lrrc7, leucine rich repeat containing 7, [Score=70.9, Expect=6e-13]} {Dmel: FBgn0033984, Lap1, [Score=84.3, Expect=1e-17]} {Celegans: WBGene00021533, Y42G9A.3, [Score=65.1, Expect=1e-11]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=77.0, Expect=2e-15]} {RNA1509_15990} {RNA1310_35662} {RNA815_28491}
2. MligTC455_26165 453 9.43 Mlig455_059812

Neo: Germline

Age: -

Region-specific R5: 4.889

Region-enriched R5: 4.350/0.00000

 0.969 - - - 0.969 - - Mlig455_059812 {REF} {Length: 6330} {Dmel: FBgn0261793, Trf2, TATA box binding protein-related factor 2, [Score=65.5, Expect=4e-10]} {RNA1509_16146, RNA1509_18813, RNA1509_19434, RNA1509_23716, RNA1509_27114, RNA1509_28369, RNA1509_30263, RNA1509_30522, RNA1509_34734, RNA1509_36470, RNA1509_37004, RNA1509_37254, RNA1509_44739, RNA1509_46899, RNA1509_48681} {RNA1310_33576, RNA1509_16146, RNA1509_19434, RNA1509_23716, RNA1509_27114, RNA1509_28369, RNA1509_30263, RNA1509_30522, RNA1509_34734, RNA1509_36470, RNA1509_37004, RNA1509_37254, RNA1509_44739, RNA1509_46899, RNA1509_48681} {RNA1509_16146, RNA1509_19434, RNA1509_23716, RNA1509_27114, RNA1509_28369, RNA1509_30263, RNA1509_30522, RNA1509_34734, RNA1509_36470, RNA1509_37004, RNA1509_37254, RNA1509_44739, RNA1509_46899, RNA1509_48681, RNA815_17643}
3. MligTC455_22020 269 5.6 Mlig455_031510

Neo: -

Age: logFC(26M/2M)=-0.289

 MAP3K7 0.962 - - - 0.962 - - Mlig455_031510 {REF} {Length: 3506} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=169.0]; Protein kinase domain [PF00069.27, score=168.0]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [RH, Score=229, Expect=1e-67]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [RH, Score=229, Expect=1e-67]} {Dmel: FBgn0026323, Tak1, TGF-beta activated kinase 1, [RH, Score=231, Expect=1e-67]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [RH, Score=159, Expect=3e-42]} {Smed: dd_Smed_v6_2589_0_2, dd_Smed_v6_2589_0_2, [RH, Score=195, Expect=8e-57]} {RNA1509_28110} {RNA1310_9032, RNA1509_28110} {RNA1509_28110, RNA815_3215}
4. MligTC455_32723 152 3.17 Mlig455_035869, Mlig455_035908

Neo: -

Age: -

 0.956 - - - 0.956 - -

Mlig455_035869 {REF} {Length: 726} {NoTransDecoderORF} {RNA1509_42439} {RNA1310_109566} {RNA815_11756.1}

Mlig455_035908 {REF} {Length: 575} {NoTransDecoderORF} {RNA1509_42439} {RNA1310_109566} {RNA815_11756.1}
5. MligTC455_46865 283 5.9 Mlig455_014261

Neo: -

Age: logFC(26M/2M)=0.281

Region-enriched R5: 1.237/0.04014

 RASSF5 0.955 - - - 0.955 - - Mlig455_014261 {REF} {Length: 2975} {TRANSSPLICED} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=33.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=31.5]; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain [PF16517.7, score=30.1]} {Human: ENSG00000266094, RASSF5, Ras association domain family member 5, [Score=76.3, Expect=5e-15]; ENSG00000068028, RASSF1, Ras association domain family member 1, [Score=76.3, Expect=5e-15]} {Mouse: ENSMUSG00000010067, Rassf1, Ras association (RalGDS/AF-6) domain family member 1, [Score=82.0, Expect=4e-17]} {Celegans: WBGene00011995, rsf-1, RASSF (Ras-association domain family) homolog, [Score=98.2, Expect=5e-22]} {Smed: dd_Smed_v6_5323_0_1, dd_Smed_v6_5323_0_1, [Score=110, Expect=2e-26]} {RNA1509_20974, RNA1509_41771} {RNA1310_11862, RNA1509_20974, RNA1509_41771} {RNA1509_20974, RNA1509_41771, RNA815_13937}
6. MligTC455_25117 227 4.74 Mlig455_034425

Neo: -

Age: -

 WARS2 0.95 - - - 0.950 - - Mlig455_034425 {REF} {Length: 1953} {TRANSSPLICED} {Pfam: tRNA synthetases class I (W and Y) [PF00579.27, score=184.3]} {Human: ENSG00000116874, WARS2, tryptophanyl tRNA synthetase 2, mitochondrial, [RH, Score=267, Expect=1e-86]} {Mouse: ENSMUSG00000004233, Wars2, tryptophanyl tRNA synthetase 2 (mitochondrial), [RH, Score=250, Expect=3e-80]} {Dmel: FBgn0036763, TrpRS-m, Tryptophanyl-tRNA synthetase, mitochondrial, [RH, Score=233, Expect=2e-70]} {Celegans: WBGene00006946, prx-10, Tryptophan--tRNA ligase, mitochondrial, [RH, Score=225, Expect=9e-71]} {Smed: dd_Smed_v6_6466_0_1, dd_Smed_v6_6466_0_1, [RH, Score=230, Expect=1e-72]} {RNA1509_24436} {RNA1310_20843.2, RNA1509_24436} {RNA1509_24436, RNA815_16422}

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