Data search
Results for MligTC455_25117
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25117 | 227 | 4.74 | Mlig455_034425 | Neo: - Age: - |
WARS2 | Mlig455_034425 {REF} {Length: 1953} {TRANSSPLICED} {Pfam: tRNA synthetases class I (W and Y) [PF00579.27, score=184.3]} {Human: ENSG00000116874, WARS2, tryptophanyl tRNA synthetase 2, mitochondrial, [RH, Score=267, Expect=1e-86]} {Mouse: ENSMUSG00000004233, Wars2, tryptophanyl tRNA synthetase 2 (mitochondrial), [RH, Score=250, Expect=3e-80]} {Dmel: FBgn0036763, TrpRS-m, Tryptophanyl-tRNA synthetase, mitochondrial, [RH, Score=233, Expect=2e-70]} {Celegans: WBGene00006946, prx-10, Tryptophan--tRNA ligase, mitochondrial, [RH, Score=225, Expect=9e-71]} {Smed: dd_Smed_v6_6466_0_1, dd_Smed_v6_6466_0_1, [RH, Score=230, Expect=1e-72]} {RNA1509_24436} {RNA1310_20843.2, RNA1509_24436} {RNA1509_24436, RNA815_16422} |
Cumulative graph for MligTC455_25117
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.768 | 2.929 | 0.65438 | 1.00000 | |
| RegionR2 | 0.978 | 2.929 | 0.20081 | 0.56162 | |
| RegionR3 | -0.142 | 2.929 | 0.78486 | 1.00000 | |
| RegionR4 | -0.272 | 2.929 | 0.73006 | 1.00000 | |
| RegionR5 | 0.393 | 2.929 | 0.40537 | 0.76360 | |
| RegionR6 | -0.332 | 2.929 | 0.55343 | 1.00000 | |
| RegionR7 | 0.153 | 2.929 | 0.83588 | 1.00000 | |
| RegionR8 | -0.01 | 2.929 | 0.99603 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.023 | 2.929 | 0.63389 | 1.00000 | |
| RegenerationR2 | -0.102 | 2.929 | 0.87411 | 1.00000 | |
| RegenerationR3 | 0.574 | 2.929 | 0.40583 | 0.80642 | |
| RegenerationR4 | 0.011 | 2.929 | 0.97956 | 1.00000 | |
| RegenerationR5 | 0.28 | 2.929 | 0.59981 | 0.91001 | |
| RegenerationR6 | 0.878 | 2.929 | 0.22779 | 0.57318 | |
| RegenerationBL | 0.852 | 2.929 | 0.42000 | 0.78849 | |
| RegenerationTP | -1.154 | 2.929 | 0.32684 | 0.77151 |
Genes with expression patterns similar to MligTC455_25117
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25117 | 227 | 4.74 | Mlig455_034425 | Neo: - Age: - |
WARS2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_034425 {REF} {Length: 1953} {TRANSSPLICED} {Pfam: tRNA synthetases class I (W and Y) [PF00579.27, score=184.3]} {Human: ENSG00000116874, WARS2, tryptophanyl tRNA synthetase 2, mitochondrial, [RH, Score=267, Expect=1e-86]} {Mouse: ENSMUSG00000004233, Wars2, tryptophanyl tRNA synthetase 2 (mitochondrial), [RH, Score=250, Expect=3e-80]} {Dmel: FBgn0036763, TrpRS-m, Tryptophanyl-tRNA synthetase, mitochondrial, [RH, Score=233, Expect=2e-70]} {Celegans: WBGene00006946, prx-10, Tryptophan--tRNA ligase, mitochondrial, [RH, Score=225, Expect=9e-71]} {Smed: dd_Smed_v6_6466_0_1, dd_Smed_v6_6466_0_1, [RH, Score=230, Expect=1e-72]} {RNA1509_24436} {RNA1310_20843.2, RNA1509_24436} {RNA1509_24436, RNA815_16422} |
| 2. | MligTC455_52190 | 488 | 10.17 | Mlig455_065357 | Neo: Int S/G2/M Age: - |
SMNDC1 | 1.777 | - | - | - | - | 0.954 | 0.823 | Mlig455_065357 {REF} {Length: 1981} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=39.2]} {Human: ENSG00000119953, SMNDC1, survival motor neuron domain containing 1, [RH, Score=123, Expect=1e-33]} {Mouse: ENSMUSG00000025024, Smndc1, survival motor neuron domain containing 1, [RH, Score=123, Expect=9e-34]} {Dmel: FBgn0039977, CG17454, [RH, Score=110, Expect=7e-29]} {Celegans: WBGene00004891, smr-1, SMN (Survival of Motor Neuron protein) Related, [RH, Score=59.7, Expect=2e-10]} {Smed: dd_Smed_v6_5356_0_1, dd_Smed_v6_5356_0_1, [RH, Score=79.0, Expect=5e-18]} {RNA1509_22547, RNA1509_54494} {RNA1310_19986, RNA1509_22547, RNA1509_54494} {RNA1509_22547, RNA1509_54494, RNA815_8484.1} |
| 3. | MligTC455_22020 | 269 | 5.6 | Mlig455_031510 | Neo: - Age: logFC(26M/2M)=-0.289 |
MAP3K7 | 1.742 | - | - | - | 0.963 | 0.779 | - | Mlig455_031510 {REF} {Length: 3506} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=169.0]; Protein kinase domain [PF00069.27, score=168.0]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [RH, Score=229, Expect=1e-67]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [RH, Score=229, Expect=1e-67]} {Dmel: FBgn0026323, Tak1, TGF-beta activated kinase 1, [RH, Score=231, Expect=1e-67]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [RH, Score=159, Expect=3e-42]} {Smed: dd_Smed_v6_2589_0_2, dd_Smed_v6_2589_0_2, [RH, Score=195, Expect=8e-57]} {RNA1509_28110} {RNA1310_9032, RNA1509_28110} {RNA1509_28110, RNA815_3215} |
| 4. | MligTC455_10894 | 68 | 1.42 | Mlig455_030875 | Neo: - Age: - Region-enriched R4: 4.061/0.00000 |
0.965 | - | - | - | 0.965 | - | - | Mlig455_030875 {REF} {Length: 912} {NoTransDecoderORF} {RNA1310_51062} {RNA815_26657} | |
| 5. | MligTC455_46865 | 283 | 5.9 | Mlig455_014261 | Neo: - Age: logFC(26M/2M)=0.281 Region-enriched R5: 1.237/0.04014 |
RASSF5 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_014261 {REF} {Length: 2975} {TRANSSPLICED} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=33.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=31.5]; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain [PF16517.7, score=30.1]} {Human: ENSG00000266094, RASSF5, Ras association domain family member 5, [Score=76.3, Expect=5e-15]; ENSG00000068028, RASSF1, Ras association domain family member 1, [Score=76.3, Expect=5e-15]} {Mouse: ENSMUSG00000010067, Rassf1, Ras association (RalGDS/AF-6) domain family member 1, [Score=82.0, Expect=4e-17]} {Celegans: WBGene00011995, rsf-1, RASSF (Ras-association domain family) homolog, [Score=98.2, Expect=5e-22]} {Smed: dd_Smed_v6_5323_0_1, dd_Smed_v6_5323_0_1, [Score=110, Expect=2e-26]} {RNA1509_20974, RNA1509_41771} {RNA1310_11862, RNA1509_20974, RNA1509_41771} {RNA1509_20974, RNA1509_41771, RNA815_13937} |
| 6. | MligTC455_22089 | 90 | 1.87 | Mlig455_003176 | Neo: Irradiation Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_003176 {REF} {Length: 3783} {TRANSSPLICED} {RNA1509_23005} {RNA1310_11644.1} {RNA815_1539.2} | |
| 7. | MligTC455_02672 | 334 | 6.95 | Mlig455_042012 | Neo: - Age: Up-Up-Down Region-enriched R2: 3.139/0.00043 Regeneration-upregulated TP: 4.172 Regeneration-enriched TP: 4.172 |
PPP1R3A | 0.954 | - | - | - | 0.954 | - | - | Mlig455_042012 {REF} {Length: 4507} {TRANSSPLICED} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=87.8]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=44.2]; BTB/POZ domain [PF00651.33, score=27.4]} {Human: ENSG00000154415, PPP1R3A, protein phosphatase 1 regulatory subunit 3A, [RH, Score=110, Expect=5e-24]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=89.4, Expect=5e-19]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=103, Expect=2e-22]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=85.5, Expect=1e-17]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [RH, Score=122, Expect=2e-30]} {RNA1509_16470, RNA1509_22847} {RNA1310_2197, RNA1509_16470, RNA1509_22847} {RNA1509_16470, RNA1509_22847, RNA815_5976} |
| 8. | MligTC455_21796 | 214 | 4.46 | Mlig455_000306, Mlig455_012297, Mlig455_012302, Mlig455_054373 | Neo: - Age: logFC(26M/2M)=0.881 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_000306 {REF} {Length: 2331} {RNA1509_13560} {RNA1310_3494.1} {RNA815_8590} Mlig455_012297 {REF} {Length: 1979} {RNA1509_13560} {RNA1310_3494.1} {RNA815_8590} Mlig455_012302 {REF} {Length: 2233} {RNA1509_13560} {RNA1310_3494.1} {RNA815_8590} Mlig455_054373 {REF} {Length: 2112} {RNA1509_13560} {RNA1310_3494.1} {RNA815_8590} |
|
| 9. | MligTC455_50898 | 26 | 0.55 | Mlig455_053568 | Neo: - Age: - Region-enriched R4: 5.983/0.00107 |
0.954 | - | - | 0.954 | - | - | - | Mlig455_053568 {REF} {Length: 1320} {RNA1509_27480} {RNA1310_54225} {RNA815_31675} | |
| 10. | MligTC455_23342 | 53 | 1.1 | Mlig455_050792 | Neo: - Age: Down-Up-Down |
SHOC2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_050792 {REF} {Length: 3211} {Pfam: Leucine rich repeat [PF13855.8, score=52.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=34.7]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=72.8, Expect=2e-13]; ENSG00000188306, LRRIQ4, leucine rich repeats and IQ motif containing 4, [Score=69.3, Expect=2e-12]; ENSG00000033122, LRRC7, leucine rich repeat containing 7, [Score=69.3, Expect=3e-12]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=72.8, Expect=9e-14]; ENSMUSG00000028176, Lrrc7, leucine rich repeat containing 7, [Score=70.9, Expect=6e-13]} {Dmel: FBgn0033984, Lap1, [Score=84.3, Expect=1e-17]} {Celegans: WBGene00021533, Y42G9A.3, [Score=65.1, Expect=1e-11]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=77.0, Expect=2e-15]} {RNA1509_15990} {RNA1310_35662} {RNA815_28491} |
| 11. | MligTC455_25212 | 251 | 5.23 | Mlig455_049236 | Neo: - Age: logFC(26M/2M)=0.733 |
TRIP4 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_049236 {REF} {Length: 2082} {TRANSSPLICED} {Pfam: ASCH domain [PF04266.16, score=64.7]; Putative zinc finger motif, C2HC5-type [PF06221.15, score=44.1]} {Human: ENSG00000103671, TRIP4, thyroid hormone receptor interactor 4, [RH, Score=382, Expect=1e-126]} {Mouse: ENSMUSG00000032386, Trip4, thyroid hormone receptor interactor 4, [RH, Score=382, Expect=2e-126]} {Dmel: FBgn0031115, CG11710, [RH, Score=350, Expect=5e-115]} {Celegans: WBGene00000208, asc-1, ASC-1; Activating Signal Cointegrator homolog, [RH, Score=142, Expect=3e-37]} {Smed: dd_Smed_v6_9211_0_1, dd_Smed_v6_9211_0_1, [RH, Score=332, Expect=2e-109]} {RNA1509_40837} {RNA1310_3130.1} {RNA815_4330} |
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