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Results for MligTC455_23350

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23350 404 8.43 Mlig455_070578

Neo: -

Age: -

 TANGO6 Mlig455_070578 {REF} {Length: 5457} {TRANSSPLICED} {Pfam: Required for nuclear transport of RNA pol II C-terminus 1 [PF10363.11, score=54.6]; HEAT repeat [PF02985.24, score=21.8]; HEAT repeats [PF13646.8, score=19.2]} {Human: ENSG00000103047, TANGO6, transport and golgi organization 6 homolog, [Score=87.4, Expect=1e-16]} {Mouse: ENSMUSG00000041949, Tango6, transport and golgi organization 6, [RH, Score=71.2, Expect=5e-12]} {Celegans: WBGene00011806, ekl-6, [RH, Score=62.4, Expect=3e-09]} {Smed: dd_Smed_v6_7512_0_1, dd_Smed_v6_7512_0_1, [RH, Score=53.1, Expect=1e-06]} {RNA1509_12450} {RNA1310_5141} {RNA815_5744}

Cumulative graph for MligTC455_23350

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.188 3.551 0.25342 0.90072
RegionR2 1.869 3.551 0.01460 0.12721
RegionR3 1.224 3.551 0.11501 0.58937
RegionR4 1.432 3.551 0.07629 0.25654
RegionR5 0.836 3.551 0.31712 0.65760
RegionR6 0.765 3.551 0.39263 0.96697
RegionR7 1.222 3.551 0.21870 0.83829
RegionR8 -2.161 3.551 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.724 3.551 0.20934 0.94839
RegenerationR2 0.062 3.551 0.85523 1.00000
RegenerationR3 -0.021 3.551 0.95737 1.00000
RegenerationR4 -0.122 3.551 0.77665 0.97912
RegenerationR5 0.248 3.551 0.53050 0.87517
RegenerationR6 0.248 3.551 0.59182 0.86467
RegenerationBL 1.404 3.551 0.06461 0.29564
RegenerationTP 1.535 3.551 0.13367 0.54953


Genes with expression patterns similar to MligTC455_23350

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23350 404 8.43 Mlig455_070578

Neo: -

Age: -

 TANGO6 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_070578 {REF} {Length: 5457} {TRANSSPLICED} {Pfam: Required for nuclear transport of RNA pol II C-terminus 1 [PF10363.11, score=54.6]; HEAT repeat [PF02985.24, score=21.8]; HEAT repeats [PF13646.8, score=19.2]} {Human: ENSG00000103047, TANGO6, transport and golgi organization 6 homolog, [Score=87.4, Expect=1e-16]} {Mouse: ENSMUSG00000041949, Tango6, transport and golgi organization 6, [RH, Score=71.2, Expect=5e-12]} {Celegans: WBGene00011806, ekl-6, [RH, Score=62.4, Expect=3e-09]} {Smed: dd_Smed_v6_7512_0_1, dd_Smed_v6_7512_0_1, [RH, Score=53.1, Expect=1e-06]} {RNA1509_12450} {RNA1310_5141} {RNA815_5744}
2. MligTC455_23349 679 14.15 Mlig455_001165, Mlig455_001325

Neo: -

Age: -

 TANGO6 4.419 0.856 - 0.903 0.778 0.916 0.966

Mlig455_001165 {REF} {Length: 6816} {Pfam: Required for nuclear transport of RNA pol II C-terminus 1 [PF10363.11, score=52.6]; SAP domain [PF02037.29, score=33.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=30.8]; HEAT repeat [PF02985.24, score=20.4]} {Human: ENSG00000103047, TANGO6, transport and golgi organization 6 homolog, [RH, Score=96.7, Expect=4e-19]} {Mouse: ENSMUSG00000041949, Tango6, transport and golgi organization 6, [Score=80.5, Expect=2e-14]} {Celegans: WBGene00011806, ekl-6, [Score=63.5, Expect=2e-09]} {Smed: dd_Smed_v6_7512_0_1, dd_Smed_v6_7512_0_1, [Score=51.6, Expect=6e-06]} {RNA1509_49696} {RNA1310_5141} {RNA815_5744}

Mlig455_001325 {REF} {Length: 5557} {TRANSSPLICED} {Pfam: Required for nuclear transport of RNA pol II C-terminus 1 [PF10363.11, score=54.5]; HEAT repeat [PF02985.24, score=21.8]} {Human: ENSG00000103047, TANGO6, transport and golgi organization 6 homolog, [RH, Score=96.7, Expect=2e-19]} {Mouse: ENSMUSG00000041949, Tango6, transport and golgi organization 6, [RH, Score=82.4, Expect=4e-15]} {Celegans: WBGene00011806, ekl-6, [RH, Score=64.7, Expect=5e-10]} {Smed: dd_Smed_v6_7512_0_1, dd_Smed_v6_7512_0_1, [Score=50.8, Expect=6e-06]} {RNA1509_49696} {RNA1310_5141} {RNA815_2736}
3. MligTC455_35890 1563 32.56 Mlig455_047529, Mlig455_047538, Mlig455_059662

Neo: -

Age: -

 IFT80 2.696 - - - 0.954 0.846 0.896

Mlig455_047529 {REF} {Length: 2724} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=55.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.4]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [RH, Score=868, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [RH, Score=447, Expect=7e-146]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [RH, Score=581, Expect=0.0]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [RH, Score=793, Expect=0.0]} {RNA1509_7485} {RNA1310_7061, RNA1509_7485} {RNA1509_7485, RNA815_2221}

Mlig455_047538 {REF} {Length: 2547} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=52.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.7]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [Score=703, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [Score=703, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [Score=358, Expect=2e-113]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [Score=451, Expect=3e-149]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [Score=620, Expect=0.0]} {RNA1509_7485} {RNA1310_7061} {RNA815_2221}

Mlig455_059662 {REF} {Length: 2718} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=54.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.1]} {Human: ENSG00000068885, IFT80, intraflagellar transport 80, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000027778, Ift80, intraflagellar transport 80, [RH, Score=869, Expect=0.0]} {Dmel: FBgn0032891, Oseg5, Outer segment 5, [RH, Score=448, Expect=2e-146]} {Celegans: WBGene00000484, che-2, CHE-2 protein, [RH, Score=581, Expect=0.0]} {Smed: dd_Smed_v6_9110_0_1, dd_Smed_v6_9110_0_1, [RH, Score=794, Expect=0.0]} {RNA1509_7485} {RNA1310_7061} {RNA815_2221}
4. MligTC455_18581 359 7.49 Mlig455_043904

Neo: -

Age: -

 2.472 - - - 0.706 0.799 0.967 Mlig455_043904 {REF} {Length: 1673} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=22.6]} {RNA1509_30040} {RNA1310_17635.1, RNA1509_30040} {RNA1509_30040, RNA815_27521}
5. MligTC455_35889 3338 69.55 Mlig455_000173, Mlig455_067716

Neo: -

Age: logFC(26M/2M)=0.414

Region-enriched R7: 1.070/0.00379

 LDB3 2.42 - - 0.730 0.953 0.737 -

Mlig455_000173 {REF} {Length: 3141} {Pfam: PDZ domain [PF00595.26, score=50.2]; Domain of unknown function (DUF4749) [PF15936.7, score=35.6]} {Human: ENSG00000122367, LDB3, LIM domain binding 3, [RH, Score=78.2, Expect=4e-15]} {Mouse: ENSMUSG00000021798, Ldb3, LIM domain binding 3, [RH, Score=78.2, Expect=1e-15]} {Dmel: FBgn0035917, Zasp66, Z band alternatively spliced PDZ-motif protein 66, [Score=77.8, Expect=1e-15]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_1210_0_1, dd_Smed_v6_1210_0_1, [RH, Score=115, Expect=9e-28]} {RNA1509_22539, RNA1509_26044, RNA1509_2989, RNA1509_37926} {RNA1310_5136, RNA1509_22539, RNA1509_26044, RNA1509_2989, RNA1509_37926} {RNA1509_22539, RNA1509_26044, RNA1509_2989, RNA1509_37926, RNA815_1546.1}

Mlig455_067716 {REF} {Length: 3083} {Pfam: Domain of unknown function (DUF4749) [PF15936.7, score=35.2]} {RNA1509_22539} {RNA1310_6784} {RNA815_1546.1}
6. MligTC455_22340 3334 69.47 Mlig455_014248

Neo: -

Age: -

 EFHC1 1.825 - - - 0.872 0.953 - Mlig455_014248 {REF} {Length: 1821} {Pfam: DUF1126 PH-like domain [PF06565.14, score=178.7]} {Human: ENSG00000096093, EFHC1, EF-hand domain containing 1, [Score=318, Expect=3e-103]} {Mouse: ENSMUSG00000041809, Efhc1, EF-hand domain (C-terminal) containing 1, [Score=294, Expect=8e-94]} {Dmel: FBgn0034487, Efhc1.2, EF-hand domain containing 1.2, [Score=187, Expect=6e-53]} {Smed: dd_Smed_v6_2935_0_1, dd_Smed_v6_2935_0_1, [Score=464, Expect=2e-160]} {RNA1509_1890} {RNA1310_7623.1} {RNA815_2220}
7. MligTC455_52863 294 6.13 Mlig455_032725

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.445

 1.798 - - - 0.840 - 0.958 Mlig455_032725 {REF} {Length: 3157} {RNA1509_57987} {RNA1310_22434.1} {RNA815_10826}
8. MligTC455_43641 1815 37.81 Mlig455_012350, Mlig455_012727

Neo: -

Age: -

 1.651 - - - 0.951 - 0.700

Mlig455_012350 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: Immunoglobulin V-set domain [PF07686.19, score=19.8]} {RNA1509_12109} {RNA1310_16228, RNA1509_12109} {RNA1509_12109, RNA815_15191}

Mlig455_012727 {REF} {Length: 4556} {Pfam: Immunoglobulin V-set domain [PF07686.19, score=19.5]} {RNA1509_12109, RNA1509_48222} {RNA1310_16228, RNA1509_48222} {RNA1509_48222, RNA815_15191}
9. MligTC455_46254 1114 23.21 Mlig455_000448

Neo: -

Age: -

 CASC1 0.955 - - - 0.955 - - Mlig455_000448 {REF} {Length: 3104} {Pfam: Cancer susceptibility candidate 1 N-terminus [PF15927.7, score=168.4]; Cancer susceptibility candidate 1 C-terminal [PF12366.10, score=29.2]} {Human: ENSG00000118307, CASC1, cancer susceptibility 1, [RH, Score=320, Expect=4e-98]} {Mouse: ENSMUSG00000043541, Casc1, cancer susceptibility candidate 1, [RH, Score=295, Expect=2e-88]} {Dmel: FBgn0030889, CG15373, [RH, Score=83.6, Expect=4e-16]} {Smed: dd_Smed_v6_11291_0_1, dd_Smed_v6_11291_0_1, [RH, Score=521, Expect=7e-175]} {RNA1509_1842} {RNA1310_6962.1, RNA1509_1842} {RNA1509_1842, RNA815_2139}
10. MligTC455_42287 73 1.52 Mlig455_042810

Neo: -

Age: -

 NPFFR1 0.953 - - - - - 0.953 Mlig455_042810 {REF} {Length: 1659} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=87.4]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=64.7, Expect=8e-11]} {Mouse: ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=68.9, Expect=2e-12]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=65.5, Expect=2e-11]} {Dmel: FBgn0004622, TkR99D, Tachykinin-like receptor at 99D, [Score=83.6, Expect=3e-17]} {Celegans: WBGene00021897, ser-6, SERotonin/octopamine receptor family, [Score=65.1, Expect=2e-11]} {Smed: dd_Smed_v6_45004_0_1, dd_Smed_v6_45004_0_1, [Score=69.7, Expect=5e-13]} {RNA1310_19087.2} {RNA815_19700}

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