M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_23388

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23388 37 0.77 Mlig455_052262

Neo: -

Age: -

 Mlig455_052262 {REF} {Length: 1775} {NoTransDecoderORF} {RNA1509_45628} {RNA1310_35069} {RNA815_18255}

Cumulative graph for MligTC455_23388

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.664 1.093 1.00000 1.00000
RegionR2 1.953 1.093 0.20637 0.56893
RegionR3 -0.444 1.093 0.89101 1.00000
RegionR4 1.278 1.093 0.33323 0.65183
RegionR5 -0.504 1.093 1.00000 1.00000
RegionR6 0.699 1.093 0.46543 1.00000
RegionR7 -0.559 1.093 0.85188 1.00000
RegionR8 -0.761 1.093 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.853 1.093 1.00000 1.00000
RegenerationR2 -0.226 1.093 0.71298 0.96081
RegenerationR3 1.812 1.093 0.25196 0.68639
RegenerationR4 0.7 1.093 0.55292 0.89346
RegenerationR5 1.927 1.093 0.11543 0.51130
RegenerationR6 0.247 1.093 0.88592 1.00000
RegenerationBL 1.317 1.093 0.55012 0.90710
RegenerationTP 3.357 1.093 0.20685 0.64873


Genes with expression patterns similar to MligTC455_23388

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23388 37 0.77 Mlig455_052262

Neo: -

Age: -

 3 - - 1.000 - 1.000 1.000 Mlig455_052262 {REF} {Length: 1775} {NoTransDecoderORF} {RNA1509_45628} {RNA1310_35069} {RNA815_18255}
2. MligTC455_48791 22 0.45 Mlig455_049838

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.709

 1.842 - - 0.891 - - 0.951 Mlig455_049838 {REF} {Length: 1309} {RNA1509_59166} {RNA1310_26794.1} {RNA815_13204}
3. MligTC455_39693 41 0.86 Mlig455_063193

Neo: -

Age: Up-Down-Down

 MTCL1 1.774 - - 0.822 - - 0.952 Mlig455_063193 {REF} {Length: 6739} {Pfam: Protein SOGA [PF11365.10, score=34.5]; Chromatin assembly factor 1 complex p150 subunit, N-terminal [PF11600.10, score=21.5]; Myosin-like coiled-coil protein [PF09728.11, score=20.0]; Growth-arrest specific micro-tubule binding [PF13851.8, score=19.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.6]; Fez1 [PF06818.17, score=19.3]} {Human: ENSG00000168502, MTCL1, microtubule crosslinking factor 1, [RH, Score=102, Expect=6e-21]; ENSG00000149639, SOGA1, suppressor of glucose, autophagy associated 1, [RH, Score=101, Expect=1e-20]} {Mouse: ENSMUSG00000055485, Soga1, suppressor of glucose, autophagy associated 1, [RH, Score=109, Expect=2e-23]; ENSMUSG00000052105, Mtcl1, microtubule crosslinking factor 1, [RH, Score=108, Expect=7e-23]} {Dmel: FBgn0031869, CG18304, [RH, Score=89.7, Expect=2e-17]} {Celegans: WBGene00044079, tag-241, [Score=143, Expect=5e-34]} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [Score=322, Expect=7e-89]} {RNA1509_19671} {RNA1310_1157, RNA1509_19671} {RNA1509_19671, RNA815_16429}
4. MligTC455_40818 639 13.3 Mlig455_052157, Mlig455_054166, Mlig455_060705

Neo: -

Age: -

Region-enriched R2: 3.411/0.00218
Region-enriched R7: 2.728/0.03044

Regeneration-downregulated BL: -7.120

Regeneration-depleted BL: -7.120

 1.747 - - 0.792 - - 0.955

Mlig455_052157 {REF} {Length: 1229} {RNA1310_27543} {RNA815_14190}

Mlig455_054166 {REF} {Length: 1295} {RNA1310_27543} {RNA815_14190}

Mlig455_060705 {REF} {Length: 1292} {RNA1310_27543} {RNA815_14190}
5. MligTC455_49296 69 1.44 Mlig455_034352, Mlig455_034414

Neo: -

Age: -

 1.713 - - 0.761 - - 0.952

Mlig455_034352 {REF} {Length: 912} {TRANSSPLICED}

Mlig455_034414 {REF} {Length: 919} {TRANSSPLICED}
6. MligTC455_28853 46 0.95 Mlig455_038135

Neo: -

Age: -

 0.99 - - 0.990 - - - Mlig455_038135 {REF} {Length: 2519} {RNA1509_34937} {RNA1310_2313.1} {RNA815_7759.1}
7. MligTC455_24186 27 0.57 Mlig455_015406

Neo: -

Age: Down-Down-Up

 0.984 - - 0.984 - - - Mlig455_015406 {REF} {Length: 1189} {Pfam: Universal stress protein family [PF00582.28, score=99.0]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=120, Expect=2e-35]} {RNA1509_21807} {RNA1310_29361} {RNA815_14569}
8. MligTC455_22744 16 0.32 Mlig455_011656, Mlig455_011657, Mlig455_049929

Neo: Int S/G2/M

Age: -

 0.979 - - 0.979 - - -

Mlig455_011656 {REF} {Length: 1975} {RNA1310_84881} {RNA815_44630}

Mlig455_011657 {REF} {Length: 1205} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.0]} {RNA1310_63598}

Mlig455_049929 {REF} {Length: 4659} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.3]} {RNA1310_84881} {RNA815_44630}
9. MligTC455_25917 189 3.95 Mlig455_032799

Neo: -

Age: Down-Up-Down

 0.979 - - - - 0.979 - Mlig455_032799 {REF} {Length: 3963} {Pfam: RING-type zinc-finger [PF13445.8, score=24.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.2]; zinc-RING finger domain [PF14634.8, score=18.6]} {RNA1509_9725} {RNA1310_7028, RNA1509_9725} {RNA1509_9725, RNA815_2878}
10. MligTC455_21202 235 4.9 Mlig455_009223, Mlig455_037088

Neo: -

Age: -

 0.975 - - - - 0.975 -

Mlig455_009223 {REF} {Length: 2123} {RNA1509_31870} {RNA1310_17311.1, RNA1509_31870} {RNA1509_31870, RNA815_6909.1}

Mlig455_037088 {REF} {Length: 1791} {RNA1509_31870} {RNA1310_17311.1} {RNA815_6909.1}
11. MligTC455_46425 491 10.23 Mlig455_012189

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_012189 {REF} {Length: 1382} {RNA1509_53324, RNA1509_8642} {RNA1310_7508, RNA1509_53324, RNA1509_8642} {RNA1509_53324, RNA1509_8642, RNA815_176.1}
12. MligTC455_29153 62 1.28 Mlig455_018743, Mlig455_018911

Neo: -

Age: -

 0.969 - - 0.969 - - -

Mlig455_018743 {REF} {Length: 1064} {RNA1509_38365} {RNA1310_117516} {RNA815_19813}

Mlig455_018911 {REF} {Length: 2829} {RNA1509_38365} {RNA1310_117516} {RNA815_28950}
13. MligTC455_13474 28 0.59 Mlig455_037468

Neo: -

Age: logFC(26M/2M)=-1.035

 AGTR2 0.968 - - 0.968 - - - Mlig455_037468 {REF} {Length: 2762} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=46.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=30.6]} {Human: ENSG00000180772, AGTR2, angiotensin II receptor type 2, [Score=52.4, Expect=7e-07]; ENSG00000182631, RXFP3, relaxin family peptide receptor 3, [Score=50.1, Expect=5e-06]; ENSG00000277069, RXFP3, relaxin family peptide receptor 3, [Score=50.1, Expect=5e-06]} {Mouse: ENSMUSG00000054988, Agtr1b, angiotensin II receptor, type 1b, [Score=52.8, Expect=4e-07]; ENSMUSG00000068122, Agtr2, angiotensin II receptor, type 2, [Score=52.4, Expect=5e-07]; ENSMUSG00000034677, Gpr142, G protein-coupled receptor 142, [Score=51.6, Expect=1e-06]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=79.3, Expect=1e-15]} {Celegans: WBGene00016246, daf-37, G-protein coupled receptor daf-37, [Score=85.9, Expect=6e-18]} {Smed: dd_Smed_v6_31203_0_1, dd_Smed_v6_31203_0_1, [RH, Score=173, Expect=2e-49]} {RNA1310_71010}
14. MligTC455_16250 53 1.1 Mlig455_025568

Neo: -

Age: -

Region-enriched R4: 5.317/0.00598

 0.968 - - - - - 0.968 Mlig455_025568 {REF} {Length: 2103} {NoTransDecoderORF} {RNA1509_9817} {RNA1310_52418.1} {RNA815_41133}
15. MligTC455_50189 135 2.81 Mlig455_065146

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_065146 {REF} {Length: 934} {TRANSSPLICED} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=24.6]} {RNA1509_41946} {RNA1310_34100} {RNA815_16514}
16. MligTC455_23725 17 0.36 Mlig455_016573, Mlig455_016626, Mlig455_016627

Neo: -

Age: -

 GALR2 0.967 - - 0.967 - - -

Mlig455_016573 {REF} {Length: 2177} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=63.6]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.5]} {Human: ENSG00000182687, GALR2, galanin receptor 2, [Score=57.8, Expect=2e-08]} {Mouse: ENSMUSG00000020793, Galr2, galanin receptor 2, [Score=56.6, Expect=3e-08]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=77.8, Expect=5e-15]} {Celegans: WBGene00018728, frpr-8, FMRFamide Peptide Receptor family, [Score=52.4, Expect=5e-07]} {Smed: dd_Smed_v6_13282_0_1, dd_Smed_v6_13282_0_1, [Score=214, Expect=7e-64]} {RNA1509_46406} {RNA1310_54183} {RNA815_37397}

Mlig455_016626 {REF} {Length: 1772} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=50.1]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.5]} {Human: ENSG00000182687, GALR2, galanin receptor 2, [Score=57.8, Expect=2e-08]} {Mouse: ENSMUSG00000020793, Galr2, galanin receptor 2, [Score=56.6, Expect=4e-08]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=77.8, Expect=5e-15]} {Celegans: WBGene00018728, frpr-8, FMRFamide Peptide Receptor family, [Score=52.8, Expect=4e-07]} {Smed: dd_Smed_v6_13282_0_1, dd_Smed_v6_13282_0_1, [Score=214, Expect=8e-64]} {RNA1310_88030} {RNA815_46551}

Mlig455_016627 {REF} {Length: 383} {NoTransDecoderORF} {RNA1310_68893}
17. MligTC455_39202 47 0.99 Mlig455_010593

Neo: -

Age: Down-Up-Down

Region-enriched R2: 5.010/0.00677
Region-enriched R7: 4.029/0.03663

 CALM2 0.967 - - 0.967 - - - Mlig455_010593 {REF} {Length: 1658} {Pfam: EF hand [PF00036.34, score=125.1]; EF-hand domain pair [PF13499.8, score=116.7]; EF-hand domain pair [PF13833.8, score=96.2]; EF-hand domain [PF13405.8, score=93.9]; EF hand [PF13202.8, score=88.5]; EF-hand domain [PF14658.8, score=36.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.9]; Tellurite resistance protein TerB [PF05099.15, score=30.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.7]; Caleosin related protein [PF05042.15, score=24.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=200, Expect=5e-65]; ENSG00000160014, CALM3, calmodulin 3, [Score=198, Expect=8e-65]; ENSG00000198668, CALM1, calmodulin 1, [Score=198, Expect=7e-65]; ENSG00000178363, CALML3, calmodulin like 3, [Score=190, Expect=1e-61]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=203, Expect=3e-66]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=198, Expect=5e-65]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=198, Expect=5e-65]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=199, Expect=3e-65]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=199, Expect=2e-65]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=199, Expect=2e-65]} {RNA1509_58569} {RNA1310_33205} {RNA815_15087}
18. MligTC455_40382 81 1.7 Mlig455_008892, Mlig455_016587

Neo: -

Age: Up-Down-Down

 SVOP, SVOPL 0.965 - - - - 0.965 -

Mlig455_008892 {REF} {Length: 4330} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=113.2]; Sugar (and other) transporter [PF00083.26, score=80.7]} {Human: ENSG00000166111, SVOP, SV2 related protein, [RH, Score=380, Expect=4e-125]; ENSG00000157703, SVOPL, SVOP like, [RH, Score=365, Expect=5e-120]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [RH, Score=368, Expect=2e-120]; ENSMUSG00000029830, Svopl, SV2 related protein homolog (rat)-like, [RH, Score=361, Expect=2e-118]} {Dmel: FBgn0034956, CG4324, [RH, Score=314, Expect=2e-100]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [RH, Score=364, Expect=2e-119]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [RH, Score=473, Expect=1e-162]} {RNA1509_26220} {RNA1310_11596.2} {RNA815_6500}

Mlig455_016587 {REF} {Length: 624} {Human: ENSG00000157703, SVOPL, SVOP like, [Score=51.6, Expect=5e-08]} {Mouse: ENSMUSG00000029830, Svopl, SV2 related protein homolog (rat)-like, [Score=50.1, Expect=1e-07]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=69.3, Expect=1e-14]} {RNA1509_26220} {RNA1310_35696} {RNA815_6500}
19. MligTC455_00859 30 0.62 Mlig455_016674

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_016674 {REF} {Length: 521} {NoTransDecoderORF}
20. MligTC455_01526 34 0.7 Mlig455_005732

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_005732 {REF} {Length: 686} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_23482} {RNA815_45171}
21. MligTC455_33436 58 1.22 Mlig455_002459, Mlig455_021352, Mlig455_049703

Neo: -

Age: -

 0.962 - - - - - 0.962

Mlig455_002459 {REF} {Length: 162} {NoTransDecoderORF} {RNA1509_34375} {RNA1310_4694.1} {RNA815_29789}

Mlig455_021352 {REF} {Length: 316} {NoTransDecoderORF} {RNA1509_41110} {RNA1310_4694.1} {RNA815_29789}

Mlig455_049703 {REF} {Length: 3386} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [Score=56.2, Expect=6e-09]} {RNA1509_12203} {RNA1310_1239} {RNA815_9387}
22. MligTC455_52406 1167 24.31 Mlig455_003772, Mlig455_003784, Mlig455_054340

Neo: -

Age: Down-Up-Up

Region-enriched R3: 1.655/0.02532

 0.962 - - - - 0.962 -

Mlig455_003772 {REF} {Length: 643} {Pfam: bZIP transcription factor [PF00170.23, score=37.5]; Basic region leucine zipper [PF07716.17, score=32.4]} {RNA1509_34136} {RNA1310_67747} {RNA815_36170}

Mlig455_003784 {REF} {Length: 1179} {Pfam: bZIP transcription factor [PF00170.23, score=34.9]; Basic region leucine zipper [PF07716.17, score=32.8]} {RNA1509_34136, RNA1509_59716} {RNA1310_67747, RNA1509_34136, RNA1509_59716} {RNA1509_34136, RNA1509_59716, RNA815_36170}

Mlig455_054340 {REF} {Length: 1423} {Pfam: bZIP transcription factor [PF00170.23, score=34.9]; Basic region leucine zipper [PF07716.17, score=32.8]} {RNA1509_34136} {RNA1310_67747} {RNA815_36170}
23. MligTC455_48999 22 0.45 Mlig455_042576

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_042576 {REF} {Length: 1021} {NoTransDecoderORF} {RNA1310_122955}
24. MligTC455_30303 10 0.21 Mlig455_047619

Neo: -

Age: -

 MAP3K4 0.96 - - 0.960 - - - Mlig455_047619 {REF} {Length: 2740} {Pfam: Protein kinase domain [PF00069.27, score=165.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=121.6]; Ankyrin repeats (3 copies) [PF12796.9, score=74.8]; Ankyrin repeats (many copies) [PF13637.8, score=54.8]; Ankyrin repeats (many copies) [PF13857.8, score=53.0]; Ankyrin repeat [PF00023.32, score=40.3]; Ankyrin repeat [PF13606.8, score=36.9]; Fungal protein kinase [PF17667.3, score=26.7]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=135, Expect=2e-32]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=132, Expect=2e-31]} {Dmel: FBgn0024329, Mekk1, [Score=125, Expect=1e-29]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=142, Expect=8e-35]} {Smed: dd_Smed_v6_9041_0_1, dd_Smed_v6_9041_0_1, [Score=106, Expect=3e-25]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1}
25. MligTC455_41594 11 0.23 Mlig455_018470

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_018470 {REF} {Length: 1119} {RNA1310_35732} {RNA815_16408}
26. MligTC455_05889 28 0.58 Mlig455_027604, Mlig455_047689, Mlig455_047690

Neo: -

Age: -

 TLR4 0.957 - - 0.957 - - -

Mlig455_027604 {REF} {Length: 3445} {Pfam: Leucine rich repeat [PF13855.8, score=68.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=38.2]; TIR domain [PF01582.22, score=31.9]; TIR domain [PF13676.8, score=24.5]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=21.4]} {Human: ENSG00000136869, TLR4, toll like receptor 4, [RH, Score=74.3, Expect=6e-13]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=60.1, Expect=1e-08]; ENSMUSG00000030600, Lrfn1, leucine rich repeat and fibronectin type III domain containing 1, [Score=59.3, Expect=2e-08]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=58.5, Expect=4e-08]} {Dmel: FBgn0036494, Toll-6, [Score=80.5, Expect=4e-15]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=50.4, Expect=6e-06]} {RNA1310_7084} {RNA815_22808}

Mlig455_047689 {REF} {Length: 352} {Pfam: Leucine rich repeat [PF13855.8, score=35.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=20.6]} {RNA1310_7084} {RNA815_47088}

Mlig455_047690 {REF} {Length: 346} {Pfam: Leucine rich repeat [PF13855.8, score=68.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=38.2]; TIR domain [PF01582.22, score=31.9]; TIR domain [PF13676.8, score=24.5]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=21.4]} {Human: ENSG00000136869, TLR4, toll like receptor 4, [RH, Score=74.3, Expect=6e-13]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=60.1, Expect=1e-08]; ENSMUSG00000030600, Lrfn1, leucine rich repeat and fibronectin type III domain containing 1, [Score=59.3, Expect=2e-08]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=58.5, Expect=4e-08]} {Dmel: FBgn0036494, Toll-6, [Score=80.5, Expect=4e-15]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=50.4, Expect=6e-06]} {RNA1310_7084} {RNA815_47699}
27. MligTC455_10805 3 0.07 Mlig455_042658

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_042658 {REF} {Length: 346} {NoTransDecoderORF} {RNA1509_49109} {RNA1310_77822} {RNA815_131.1}
28. MligTC455_43365 157 3.27 Mlig455_019023

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.352

 TNN 0.957 - - - - 0.957 - Mlig455_019023 {REF} {Length: 2388} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=106.4]} {Human: ENSG00000120332, TNN, tenascin N, [Score=92.4, Expect=2e-20]; ENSG00000229353, TNXB, tenascin XB, [Score=91.3, Expect=7e-20]; ENSG00000166482, MFAP4, microfibril associated protein 4, [Score=91.3, Expect=5e-21]; ENSG00000236236, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000206258, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000233323, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000231608, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000168477, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=88.6, Expect=1e-19]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=92.0, Expect=2e-20]; ENSMUSG00000033327, Tnxb, tenascin XB, [Score=91.3, Expect=4e-20]; ENSMUSG00000042436, Mfap4, microfibrillar-associated protein 4, [Score=88.6, Expect=2e-20]} {Dmel: FBgn0003326, sca, scabrous, [Score=85.5, Expect=2e-18]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=43.5, Expect=1e-05]} {RNA1509_25852} {RNA1310_16471.3, RNA1509_25852} {RNA1509_25852, RNA815_7229.1}
29. MligTC455_03911 195 4.07 Mlig455_016862, Mlig455_065907, Mlig455_070025

Neo: -

Age: Up-Down-Down

 ARRB2 0.956 - - 0.956 - - -

Mlig455_016862 {REF} {Length: 658} {NoTransDecoderORF} {RNA1310_129767} {RNA815_58989}

Mlig455_065907 {REF} {Length: 4881} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=97.8]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=81.1]} {Human: ENSG00000141480, ARRB2, arrestin beta 2, [RH, Score=463, Expect=9e-162]} {Mouse: ENSMUSG00000060216, Arrb2, arrestin, beta 2, [RH, Score=461, Expect=5e-161]} {Dmel: FBgn0040206, krz, kurtz, [Score=462, Expect=7e-161]} {Celegans: WBGene00000195, arr-1, Probable beta-arrestin, [RH, Score=469, Expect=4e-164]} {Smed: dd_Smed_v6_5512_0_2, dd_Smed_v6_5512_0_2, [Score=556, Expect=0.0]} {RNA1310_37964.1} {RNA815_56030}

Mlig455_070025 {REF} {Length: 4243} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=98.7]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=81.1]} {Human: ENSG00000141480, ARRB2, arrestin beta 2, [RH, Score=464, Expect=3e-162]} {Mouse: ENSMUSG00000060216, Arrb2, arrestin, beta 2, [RH, Score=462, Expect=2e-161]} {Dmel: FBgn0040206, krz, kurtz, [RH, Score=464, Expect=1e-161]} {Celegans: WBGene00000195, arr-1, Probable beta-arrestin, [RH, Score=471, Expect=1e-164]} {Smed: dd_Smed_v6_5512_0_2, dd_Smed_v6_5512_0_2, [Score=558, Expect=0.0]} {RNA1310_37964.1} {RNA815_56030}
30. MligTC455_09675 171 3.57 Mlig455_019776, Mlig455_019800, Mlig455_051954

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_019776 {REF} {Length: 1043} {RNA1310_76908} {RNA815_49753}

Mlig455_019800 {REF} {Length: 1043} {RNA1310_76908} {RNA815_49753}

Mlig455_051954 {REF} {Length: 1126} {RNA1310_76908} {RNA815_49753}
31. MligTC455_39487 163 3.4 Mlig455_016534

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.614

 0.956 - - 0.956 - - - Mlig455_016534 {REF} {Length: 2067} {TRANSSPLICED} {RNA1509_28528} {RNA1310_28586} {RNA815_21057}
32. MligTC455_13800 174 3.62 Mlig455_025213, Mlig455_025646

Neo: -

Age: -

 BICDL1 0.955 - - - - - 0.955

Mlig455_025213 {REF} {Length: 3644} {TRANSSPLICED} {Pfam: Intermediate filament protein [PF00038.23, score=18.6]} {Human: ENSG00000135127, BICDL1, BICD family like cargo adaptor 1, [RH, Score=95.9, Expect=4e-20]} {Mouse: ENSMUSG00000041609, Bicdl1, BICD family like cargo adaptor 1, [RH, Score=95.5, Expect=4e-20]} {Dmel: FBgn0052137, CG32137, [RH, Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_7219_0_1, dd_Smed_v6_7219_0_1, [RH, Score=129, Expect=1e-31]} {RNA1509_34033} {RNA1310_18300.1, RNA1509_34033} {RNA1509_34033, RNA815_35699}

Mlig455_025646 {REF} {Length: 3450} {Pfam: Intermediate filament protein [PF00038.23, score=18.6]} {Human: ENSG00000135127, BICDL1, BICD family like cargo adaptor 1, [RH, Score=95.9, Expect=5e-20]} {Mouse: ENSMUSG00000041609, Bicdl1, BICD family like cargo adaptor 1, [RH, Score=95.5, Expect=5e-20]} {Dmel: FBgn0052137, CG32137, [RH, Score=99.0, Expect=3e-21]} {Smed: dd_Smed_v6_7219_0_1, dd_Smed_v6_7219_0_1, [RH, Score=129, Expect=1e-31]} {RNA1509_34033} {RNA1310_18300.1} {RNA815_35699}
33. MligTC455_51009 16 0.33 Mlig455_057754

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_057754 {REF} {Length: 198} {NoTransDecoderORF}
34. MligTC455_25784 14 0.3 Mlig455_024332

Neo: -

Age: Up-Down-Up

 0.954 - - - - 0.954 - Mlig455_024332 {REF} {Length: 2323} {RNA1310_41538} {RNA815_33731}
35. MligTC455_31098 35 0.73 Mlig455_025511, Mlig455_037030

Neo: -

Age: Down-Up-Down

 0.954 - - 0.954 - - -

Mlig455_025511 {REF} {Length: 1662} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=63.5, Expect=8e-11]} {RNA1509_32396} {RNA1310_22534} {RNA815_1171.1}

Mlig455_037030 {REF} {Length: 3378} {Pfam: Terpene synthase family 2, C-terminal metal binding [PF19086.2, score=18.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=85.5, Expect=7e-17]} {RNA1509_32396} {RNA1310_22534} {RNA815_1171.1}
36. MligTC455_46173 63 1.3 Mlig455_032091

Neo: Irradiation

Age: Up-Down-Up

 SRR 0.954 - - 0.954 - - - Mlig455_032091 {REF} {Length: 2590} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=208.5]; ACT domain [PF01842.27, score=19.8]} {Human: ENSG00000167720, SRR, serine racemase, [Score=129, Expect=2e-32]} {Mouse: ENSMUSG00000001323, Srr, serine racemase, [Score=105, Expect=4e-24]} {Dmel: FBgn0037684, CG8129, [Score=373, Expect=5e-123]} {Celegans: WBGene00010456, K01C8.1, [Score=407, Expect=5e-136]} {Smed: dd_Smed_v6_6737_0_1, dd_Smed_v6_6737_0_1, [Score=474, Expect=7e-163]} {RNA1509_48789} {RNA1310_15074} {RNA815_9364}
37. MligTC455_25015 110 2.3 Mlig455_053157

Neo: -

Age: Down-Up-Down

 TRPM7 0.953 - - - - - 0.953 Mlig455_053157 {REF} {Length: 5514} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=67.2]; Ankyrin repeats (3 copies) [PF12796.9, score=62.6]; Ankyrin repeats (many copies) [PF13857.8, score=51.4]; Ion transport protein [PF00520.33, score=37.7]; Ankyrin repeat [PF13606.8, score=29.8]; Ankyrin repeat [PF00023.32, score=21.8]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=87.8, Expect=1e-16]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=89.4, Expect=3e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=88.6, Expect=4e-17]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=81.6, Expect=4e-15]} {Smed: dd_Smed_v6_11259_0_9, dd_Smed_v6_11259_0_9, [Score=100, Expect=3e-21]} {RNA1509_55069} {RNA1310_2006} {RNA815_2659.1}
38. MligTC455_25408 35 0.72 Mlig455_026127

Neo: -

Age: Up-Down-Down

 0.953 - - - - 0.953 - Mlig455_026127 {REF} {Length: 2873} {Pfam: Variant SH3 domain [PF07653.19, score=21.9]; RIM-binding protein of the cytomatrix active zone [PF10174.11, score=16.9]} {Mouse: ENSMUSG00000034156, Tspoap1, TSPO associated protein 1, [Score=55.1, Expect=4e-07]} {Smed: dd_Smed_v6_14584_0_1, dd_Smed_v6_14584_0_1, [Score=140, Expect=5e-35]} {RNA1509_45271} {RNA1310_5741} {RNA815_46868}
39. MligTC455_13503 70 1.46 Mlig455_010582, Mlig455_010601

Neo: -

Age: -

 TRHR 0.952 - - 0.952 - - -

Mlig455_010582 {REF} {Length: 2404} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.0]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=53.1, Expect=4e-07]} {Mouse: ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=57.8, Expect=1e-08]} {Dmel: FBgn0029723, Proc-R, Proctolin receptor, [Score=66.2, Expect=2e-11]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=55.1, Expect=4e-08]} {Smed: dd_Smed_v6_25364_0_1, dd_Smed_v6_25364_0_1, [Score=167, Expect=2e-47]} {RNA1310_120532}

Mlig455_010601 {REF} {Length: 2481} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=52.6]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=57.0, Expect=2e-08]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=57.0, Expect=2e-08]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=74.3, Expect=6e-14]} {Celegans: WBGene00020069, R13H7.2, [Score=54.7, Expect=6e-08]} {Smed: dd_Smed_v6_13560_0_1, dd_Smed_v6_13560_0_1, [RH, Score=177, Expect=3e-51]} {RNA1310_92274}
40. MligTC455_47528 80 1.67 Mlig455_033824

Neo: -

Age: Down-Up-Down

 TSG101 0.952 - - 0.952 - - - Mlig455_033824 {REF} {Length: 5043} {Pfam: UEV domain [PF05743.15, score=133.4]; Vps23 core domain [PF09454.12, score=65.6]} {Human: ENSG00000074319, TSG101, tumor susceptibility 101, [RH, Score=282, Expect=8e-92]} {Mouse: ENSMUSG00000014402, Tsg101, tumor susceptibility gene 101, [RH, Score=270, Expect=2e-87]} {Dmel: FBgn0036666, TSG101, Tumor susceptibility gene 101, [RH, Score=261, Expect=6e-84]} {Celegans: WBGene00015658, tsg-101, Tumor Susceptibility Gene homolog, [RH, Score=129, Expect=1e-33]} {Smed: dd_Smed_v6_1686_0_1, dd_Smed_v6_1686_0_1, [Score=266, Expect=2e-86]} {RNA1509_5025} {RNA1310_48912.1} {RNA815_21967}
41. MligTC455_49557 280 5.82 Mlig455_017273

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.728

Region-specific R2: 3.642

Region-enriched R2: 3.187/0.00196

 0.952 - - 0.952 - - - Mlig455_017273 {REF} {Length: 1333} {RNA1509_52848} {RNA1310_64923, RNA1509_52848} {RNA1509_52848, RNA815_51063}
42. MligTC455_05325 71 1.48 Mlig455_053845

Neo: -

Age: -

Region-enriched R2: 9.011/0.00001
Region-enriched R5: 5.683/0.00001

 PDE1C 0.951 - - 0.951 - - - Mlig455_053845 {REF} {Length: 3417} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.5]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=92.1]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [RH, Score=533, Expect=2e-177]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [RH, Score=539, Expect=5e-180]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=533, Expect=2e-175]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [RH, Score=477, Expect=2e-157]} {Smed: dd_Smed_v6_11039_0_2, dd_Smed_v6_11039_0_2, [RH, Score=597, Expect=0.0]} {RNA1509_35042} {RNA1310_15340} {RNA815_34103}
43. MligTC455_05326 69 1.45 Mlig455_064642

Neo: -

Age: Down-Up-Up

Region-enriched R2: 8.953/0.00001
Region-enriched R5: 5.782/0.00000

 0.951 - - 0.951 - - - Mlig455_064642 {REF} {Length: 1359} {NoTransDecoderORF} {RNA1509_35042} {RNA1310_28854} {RNA815_34103}
44. MligTC455_44440 104 2.17 Mlig455_048542

Neo: -

Age: -

 CD81 0.95 - - 0.950 - - - Mlig455_048542 {REF} {Length: 2830} {Pfam: Tetraspanin family [PF00335.22, score=107.1]} {Human: ENSG00000110651, CD81, CD81 molecule, [Score=93.6, Expect=1e-22]} {Mouse: ENSMUSG00000037706, Cd81, CD81 antigen, [RH, Score=96.3, Expect=7e-24]} {Dmel: FBgn0027865, Tsp96F, Tetraspanin 96F, [Score=91.7, Expect=5e-22]} {Celegans: WBGene00006635, tsp-9, Tetraspanin, [Score=60.1, Expect=8e-11]} {Smed: dd_Smed_v6_2693_0_1, dd_Smed_v6_2693_0_1, [Score=108, Expect=6e-29]} {RNA1509_20527} {RNA1310_20958} {RNA815_466}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA