TomoSeq data search

Data search

Results for MligTC455_47528

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47528	80	1.67	Mlig455_033824	Neo: - Age: Down-Up-Down	TSG101	Mlig455_033824 {REF} {Length: 5043} {Pfam: UEV domain [PF05743.15, score=133.4]; Vps23 core domain [PF09454.12, score=65.6]} {Human: ENSG00000074319, TSG101, tumor susceptibility 101, [RH, Score=282, Expect=8e-92]} {Mouse: ENSMUSG00000014402, Tsg101, tumor susceptibility gene 101, [RH, Score=270, Expect=2e-87]} {Dmel: FBgn0036666, TSG101, Tumor susceptibility gene 101, [RH, Score=261, Expect=6e-84]} {Celegans: WBGene00015658, tsg-101, Tumor Susceptibility Gene homolog, [RH, Score=129, Expect=1e-33]} {Smed: dd_Smed_v6_1686_0_1, dd_Smed_v6_1686_0_1, [Score=266, Expect=2e-86]} {RNA1509_5025} {RNA1310_48912.1} {RNA815_21967}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_47528

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.634	1.722	0.52173	1.00000
RegionR2	-0.656	1.722	0.97324	1.00000
RegionR3	0.381	1.722	0.71087	1.00000
RegionR4	1.356	1.722	0.33779	0.65727
RegionR5	1.1	1.722	0.30896	0.64707
RegionR6	1.187	1.722	0.31137	0.90125
RegionR7	-0.61	1.722	0.97090	1.00000
RegionR8	0.876	1.722	0.57430	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.128	1.722	0.99997	1.00000
RegenerationR2	1.486	1.722	0.13376	0.56057
RegenerationR3	0.428	1.722	0.70889	0.95121
RegenerationR4	0.768	1.722	0.53725	0.88719
RegenerationR5	-0.162	1.722	0.86482	1.00000
RegenerationR6	0.852	1.722	0.40609	0.74154
RegenerationBL	1.219	1.722	0.32243	0.68922
RegenerationTP	0.009	1.722	0.98883	1.00000

Genes with expression patterns similar to MligTC455_47528

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47528	80	1.67	Mlig455_033824	Neo: - Age: Down-Up-Down	TSG101	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033824 {REF} {Length: 5043} {Pfam: UEV domain [PF05743.15, score=133.4]; Vps23 core domain [PF09454.12, score=65.6]} {Human: ENSG00000074319, TSG101, tumor susceptibility 101, [RH, Score=282, Expect=8e-92]} {Mouse: ENSMUSG00000014402, Tsg101, tumor susceptibility gene 101, [RH, Score=270, Expect=2e-87]} {Dmel: FBgn0036666, TSG101, Tumor susceptibility gene 101, [RH, Score=261, Expect=6e-84]} {Celegans: WBGene00015658, tsg-101, Tumor Susceptibility Gene homolog, [RH, Score=129, Expect=1e-33]} {Smed: dd_Smed_v6_1686_0_1, dd_Smed_v6_1686_0_1, [Score=266, Expect=2e-86]} {RNA1509_5025} {RNA1310_48912.1} {RNA815_21967}
2.	MligTC455_39867	78	1.62	Mlig455_037693	Neo: - Age: -	CSRP2	1.814	-	-	0.956	0.858	-	-	Mlig455_037693 {REF} {Length: 2259} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=156, Expect=4e-48]; ENSG00000159176, CSRP1, cysteine and glycine rich protein 1, [RH, Score=155, Expect=5e-48]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=150, Expect=8e-46]} {Mouse: ENSMUSG00000026421, Csrp1, cysteine and glycine-rich protein 1, [RH, Score=154, Expect=9e-48]; ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=154, Expect=1e-47]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=149, Expect=1e-45]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [Score=124, Expect=1e-33]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=87.4, Expect=9e-23]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=103, Expect=5e-28]} {RNA1509_22484} {RNA1310_29364, RNA1509_22484} {RNA1509_22484, RNA815_18492.2}
3.	MligTC455_14074	34	0.71	Mlig455_045864	Neo: - Age: -	MPP2	1.768	-	-	-	0.801	0.967	-	Mlig455_045864 {REF} {Length: 4849} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=39.2]; PDZ domain [PF17820.3, score=35.3]; PDZ domain [PF00595.26, score=32.8]} {Human: ENSG00000108852, MPP2, membrane palmitoylated protein 2, [Score=211, Expect=1e-58]} {Mouse: ENSMUSG00000017314, Mpp2, membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2), [Score=209, Expect=4e-58]; ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=204, Expect=1e-56]} {Dmel: FBgn0250785, vari, varicose, [Score=197, Expect=1e-53]} {Celegans: WBGene00002991, lin-2, [Score=158, Expect=1e-40]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [Score=218, Expect=2e-61]} {RNA1509_7432} {RNA1310_5833} {RNA815_37845}
4.	MligTC455_14443	75	1.56	Mlig455_000542	Neo: - Age: - Region-enriched R4: 5.977/0.02304 Region-enriched R5: 4.717/0.02271	GTF2H5	0.987	-	-	-	-	0.987	-	Mlig455_000542 {REF} {Length: 296} {Pfam: Transcription factor TFIIH complex subunit Tfb5 [PF06331.14, score=88.4]} {Human: ENSG00000272047, GTF2H5, general transcription factor IIH subunit 5, [RH, Score=76.6, Expect=5e-20]} {Mouse: ENSMUSG00000034345, Gtf2h5, general transcription factor IIH, polypeptide 5, [RH, Score=75.5, Expect=9e-20]} {Dmel: FBgn0265968, Tfb5, Transcription factor B5, [RH, Score=83.2, Expect=7e-23]} {Celegans: WBGene00021904, Y55B1AL.2, [RH, Score=63.2, Expect=4e-15]} {RNA1509_15559} {RNA1310_50167} {RNA815_21254}
5.	MligTC455_47364	56	1.16	Mlig455_060227	Neo: - Age: -		0.985	-	-	0.985	-	-	-	Mlig455_060227 {REF} {Length: 2643} {TRANSSPLICED} {RNA1509_52272} {RNA1310_20343.2} {RNA815_28545}
6.	MligTC455_12124	22	0.46	Mlig455_008041	Neo: - Age: -	POMGNT1	0.983	-	-	0.983	-	-	-	Mlig455_008041 {REF} {Length: 1990} {Pfam: GNT-I family [PF03071.17, score=56.0]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [Score=192, Expect=1e-52]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [Score=192, Expect=5e-53]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=67.4, Expect=1e-11]} {Celegans: WBGene00019786, M70.4, [RH, Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_12622_0_1, dd_Smed_v6_12622_0_1, [Score=48.1, Expect=1e-05]} {RNA1509_56901} {RNA1310_37241.1} {RNA815_25346}
7.	MligTC455_17443	28	0.58	Mlig455_043145	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_043145 {REF} {Length: 1166} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=21.9]} {Smed: dd_Smed_v6_10825_0_1, dd_Smed_v6_10825_0_1, [RH, Score=95.9, Expect=8e-25]} {RNA1509_7355} {RNA1310_104476} {RNA815_29001.2}
8.	MligTC455_24186	27	0.57	Mlig455_015406	Neo: - Age: Down-Down-Up		0.975	-	-	0.975	-	-	-	Mlig455_015406 {REF} {Length: 1189} {Pfam: Universal stress protein family [PF00582.28, score=99.0]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=120, Expect=2e-35]} {RNA1509_21807} {RNA1310_29361} {RNA815_14569}
9.	MligTC455_14503	38	0.8	Mlig455_045819	Neo: - Age: Up-Down-Up		0.974	-	-	-	-	0.974	-	Mlig455_045819 {REF} {Length: 1474} {NoTransDecoderORF} {RNA1509_35184, RNA1509_56373} {RNA1310_57260, RNA1509_35184, RNA1509_56373} {RNA1509_35184, RNA1509_56373, RNA815_40601}
10.	MligTC455_42012	50	1.04	Mlig455_066508	Neo: - Age: -	SEC23IP	0.973	-	-	0.973	-	-	-	Mlig455_066508 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=165.8]; SAM domain (Sterile alpha motif) [PF00536.32, score=28.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=23.5]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [RH, Score=498, Expect=1e-162]; ENSG00000085788, DDHD2, DDHD domain containing 2, [RH, Score=485, Expect=4e-161]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [RH, Score=498, Expect=1e-162]; ENSMUSG00000061313, Ddhd2, DDHD domain containing 2, [RH, Score=478, Expect=1e-158]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [RH, Score=254, Expect=2e-74]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=95.9, Expect=4e-20]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [RH, Score=288, Expect=3e-83]} {RNA1509_38825} {RNA1310_9070.1} {RNA815_7099}
11.	MligTC455_28865	175	3.64	Mlig455_011624	Neo: - Age: Down-Up-Down	EHMT1	0.972	-	-	0.972	-	-	-	Mlig455_011624 {REF} {Length: 4018} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=95.5]; Ankyrin repeats (many copies) [PF13637.8, score=86.5]; Ankyrin repeats (many copies) [PF13857.8, score=66.4]; Ankyrin repeat [PF00023.32, score=56.5]; Ankyrin repeat [PF13606.8, score=47.6]} {Human: ENSG00000181090, EHMT1, euchromatic histone lysine methyltransferase 1, [Score=81.3, Expect=5e-16]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=78.6, Expect=1e-14]} {Mouse: ENSMUSG00000036893, Ehmt1, euchromatic histone methyltransferase 1, [Score=81.6, Expect=1e-15]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=68.2, Expect=1e-11]} {Celegans: WBGene00001411, fem-1, Sex-determining protein fem-1, [Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=70.1, Expect=2e-12]} {RNA1509_28052} {RNA1310_14237} {RNA815_22032}
12.	MligTC455_47110	34	0.7	Mlig455_025028	Neo: - Age: -		0.968	-	-	0.968	-	-	-	Mlig455_025028 {REF} {Length: 521} {RNA1509_55651} {RNA1310_59019} {RNA815_42240}
13.	MligTC455_13195	123	2.57	Mlig455_059495	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.223	CHRNB3	0.966	-	-	-	-	0.966	-	Mlig455_059495 {REF} {Length: 4279} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=147.2]; Domain of unknown function (DUF4524) [PF15025.8, score=86.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=63.2]; Domain of unknown function (DUF4520) [PF15016.8, score=46.0]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=174, Expect=4e-46]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=172, Expect=2e-44]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=172, Expect=2e-45]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=170, Expect=8e-45]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=170, Expect=2e-44]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=168, Expect=1e-43]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=178, Expect=1e-47]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=178, Expect=1e-47]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=176, Expect=9e-47]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=171, Expect=4e-44]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=179, Expect=7e-48]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=176, Expect=6e-47]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=330, Expect=4e-103]} {RNA1509_41469} {RNA1310_14960.3} {RNA815_5441}
14.	MligTC455_21105	23	0.48	Mlig455_012701	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.083		0.959	-	-	0.959	-	-	-	Mlig455_012701 {REF} {Length: 3465} {Pfam: WSC domain [PF01822.21, score=210.5]} {RNA1509_16643} {RNA1310_56698} {RNA815_15048}
15.	MligTC455_51603	39	0.81	Mlig455_016769	Neo: - Age: -		0.958	-	-	0.958	-	-	-	Mlig455_016769 {REF} {Length: 1577} {RNA1509_44500} {RNA1310_22352} {RNA815_21481}
16.	MligTC455_29105	45	0.93	Mlig455_007483, Mlig455_012128, Mlig455_064550	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_007483 {REF} {Length: 115} {NoTransDecoderORF} {RNA1509_43734} {RNA1310_51856} Mlig455_012128 {REF} {Length: 3514} {TRANSSPLICED} {RNA1509_39872} {RNA1310_30293} {RNA815_50179} Mlig455_064550 {REF} {Length: 292} {NoTransDecoderORF} {RNA1509_39872} {RNA1310_30293}
17.	MligTC455_06838	42	0.88	Mlig455_063567	Neo: - Age: Down-Down-Up		0.955	-	-	0.955	-	-	-	Mlig455_063567 {REF} {Length: 1509} {RNA1310_26608}
18.	MligTC455_22744	16	0.32	Mlig455_011656, Mlig455_011657, Mlig455_049929	Neo: Int S/G2/M Age: -		0.955	-	-	0.955	-	-	-	Mlig455_011656 {REF} {Length: 1975} {RNA1310_84881} {RNA815_44630} Mlig455_011657 {REF} {Length: 1205} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.0]} {RNA1310_63598} Mlig455_049929 {REF} {Length: 4659} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.3]} {RNA1310_84881} {RNA815_44630}
19.	MligTC455_33947	224	4.67	Mlig455_049958	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.587	SLC22A13	0.955	-	-	-	0.955	-	-	Mlig455_049958 {REF} {Length: 4383} {Pfam: Sugar (and other) transporter [PF00083.26, score=65.2]; Major Facilitator Superfamily [PF07690.18, score=63.2]} {Human: ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=167, Expect=4e-44]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=168, Expect=1e-44]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=153, Expect=1e-39]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=157, Expect=6e-41]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=149, Expect=9e-39]} {RNA1509_23764, RNA1509_32769, RNA1509_45293} {RNA1310_26733.1, RNA1509_23764, RNA1509_32769, RNA1509_45293} {RNA1509_23764, RNA1509_32769, RNA1509_45293, RNA815_4265}
20.	MligTC455_20231	57	1.19	Mlig455_053859	Neo: - Age: Down-Up-Up Regeneration-downregulated R4: -5.496 Regeneration-depleted R4: -5.496		0.953	-	-	0.953	-	-	-	Mlig455_053859 {REF} {Length: 4284} {RNA1509_19779} {RNA1310_3385} {RNA815_965}
21.	MligTC455_32615	24	0.5	Mlig455_062450	Neo: - Age: -	ARX	0.953	-	-	0.953	-	-	-	Mlig455_062450 {REF} {Length: 1977} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=119, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=117, Expect=2e-32]} {RNA1310_53718} {RNA815_48205}
22.	MligTC455_47866	19	0.4	Mlig455_060884	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_060884 {REF} {Length: 1651} {RNA1310_116717}
23.	MligTC455_23388	37	0.77	Mlig455_052262	Neo: - Age: -		0.952	-	-	0.952	-	-	-	Mlig455_052262 {REF} {Length: 1775} {NoTransDecoderORF} {RNA1509_45628} {RNA1310_35069} {RNA815_18255}
24.	MligTC455_48999	22	0.45	Mlig455_042576	Neo: - Age: -		0.951	-	-	0.951	-	-	-	Mlig455_042576 {REF} {Length: 1021} {NoTransDecoderORF} {RNA1310_122955}