TomoSeq data search

Data search

Results for MligTC455_23402

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23402

1537

32.03

Mlig455_045932

Neo: -

Age: -

DRG2

Mlig455_045932 {REF} {Length: 1695} {TRANSSPLICED} {Pfam: C-terminal region of MMR_HSR1 domain [PF16897.7, score=145.3]; 50S ribosome-binding GTPase [PF01926.25, score=75.6]; TGS domain [PF02824.23, score=67.1]; Ferrous iron transport protein B [PF02421.20, score=47.8]} {Human: ENSG00000108591, DRG2, developmentally regulated GTP binding protein 2, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000020537, Drg2, developmentally regulated GTP binding protein 2, [RH, Score=590, Expect=0.0]} {Dmel: FBgn0038723, CG6195, [RH, Score=574, Expect=0.0]} {Celegans: WBGene00015346, C02F5.3, Uncharacterized GTP-binding protein C02F5.3, [RH, Score=573, Expect=0.0]} {Smed: dd_Smed_v6_4208_0_1, dd_Smed_v6_4208_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_3521} {RNA1310_3565, RNA1509_3521} {RNA1509_3521, RNA815_6941}

Cumulative graph for MligTC455_23402

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.609	5.132	0.34336	0.98752
RegionR2	-0.341	5.132	0.33552	0.72748
RegionR3	-0.079	5.132	0.78744	1.00000
RegionR4	-0.01	5.132	0.97652	1.00000
RegionR5	0.797	5.132	0.00205	0.01781
RegionR6	-0.194	5.132	0.52451	1.00000
RegionR7	0.284	5.132	0.41270	1.00000
RegionR8	-1.066	5.132	0.04161	0.40034

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.151	5.132	0.01049	0.44997
RegenerationR2	-0.001	5.132	0.99684	1.00000
RegenerationR3	0.013	5.132	0.96936	1.00000
RegenerationR4	0.219	5.132	0.53494	0.88625
RegenerationR5	-0.434	5.132	0.17227	0.60102
RegenerationR6	0.57	5.132	0.09977	0.39208
RegenerationBL	0.259	5.132	0.50425	0.86825
RegenerationTP	0.367	5.132	0.40243	0.83100

Genes with expression patterns similar to MligTC455_23402

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23402	1537	32.03	Mlig455_045932	Neo: - Age: -	DRG2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_045932 {REF} {Length: 1695} {TRANSSPLICED} {Pfam: C-terminal region of MMR_HSR1 domain [PF16897.7, score=145.3]; 50S ribosome-binding GTPase [PF01926.25, score=75.6]; TGS domain [PF02824.23, score=67.1]; Ferrous iron transport protein B [PF02421.20, score=47.8]} {Human: ENSG00000108591, DRG2, developmentally regulated GTP binding protein 2, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000020537, Drg2, developmentally regulated GTP binding protein 2, [RH, Score=590, Expect=0.0]} {Dmel: FBgn0038723, CG6195, [RH, Score=574, Expect=0.0]} {Celegans: WBGene00015346, C02F5.3, Uncharacterized GTP-binding protein C02F5.3, [RH, Score=573, Expect=0.0]} {Smed: dd_Smed_v6_4208_0_1, dd_Smed_v6_4208_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_3521} {RNA1310_3565, RNA1509_3521} {RNA1509_3521, RNA815_6941}
2.	MligTC455_45361	1171	24.39	Mlig455_048928	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.508/0.00070	SCO1	2.44	0.746	0.732	-	-	-	0.962	Mlig455_048928 {REF} {Length: 1064} {TRANSSPLICED} {Pfam: SCO1/SenC [PF02630.16, score=147.3]; AhpC/TSA family [PF00578.23, score=22.3]} {Human: ENSG00000133028, SCO1, SCO1, cytochrome c oxidase assembly protein, [RH, Score=185, Expect=2e-56]} {Mouse: ENSMUSG00000069844, Sco1, SCO1 cytochrome c oxidase assembly protein, [RH, Score=192, Expect=6e-60]} {Dmel: FBgn0262467, Scox, Synthesis of cytochrome c oxidase, [RH, Score=177, Expect=3e-54]} {Celegans: WBGene00015297, sco-1, SCO (Yeast Suppressor of Cytochrome Oxidase deficiency) homolog, [RH, Score=186, Expect=2e-57]} {Smed: dd_Smed_v6_2747_0_1, dd_Smed_v6_2747_0_1, [RH, Score=206, Expect=4e-66]} {RNA1509_10939, RNA1509_36634} {RNA1310_31267, RNA1509_10939, RNA1509_36634} {RNA1509_10939, RNA1509_36634, RNA815_17642}
3.	MligTC455_49573	617	12.86	Mlig455_022814	Neo: - Age: -	CSK	0.961	-	-	-	-	0.961	-	Mlig455_022814 {REF} {Length: 4126} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=259.6]; Protein kinase domain [PF00069.27, score=122.4]; Transmembrane Fragile-X-F protein [PF10269.11, score=115.8]; SH2 domain [PF00017.26, score=56.9]} {Human: ENSG00000103653, CSK, C-terminal Src kinase, [RH, Score=342, Expect=1e-108]} {Mouse: ENSMUSG00000032312, Csk, c-src tyrosine kinase, [RH, Score=342, Expect=4e-109]} {Dmel: FBgn0262081, Csk, C-terminal Src kinase, [Score=308, Expect=6e-93]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=278, Expect=8e-84]} {Smed: dd_Smed_v6_6039_0_1, dd_Smed_v6_6039_0_1, [Score=289, Expect=2e-88]} {RNA1509_21196} {RNA1310_5299} {RNA815_7127.1}
4.	MligTC455_54206	2323	48.39	Mlig455_008270	Neo: - Age: Down-Up-Up	PLD3	0.957	-	-	-	-	-	0.957	Mlig455_008270 {REF} {Length: 1916} {Pfam: PLD-like domain [PF13918.8, score=86.2]; PLD-like domain [PF13091.8, score=54.4]; Phospholipase D Active site motif [PF00614.24, score=27.9]} {Human: ENSG00000105223, PLD3, phospholipase D family member 3, [Score=218, Expect=1e-64]} {Mouse: ENSMUSG00000003363, Pld3, phospholipase D family, member 3, [Score=232, Expect=4e-70]} {Dmel: FBgn0263050, CG43345, [Score=168, Expect=3e-46]} {Celegans: WBGene00017316, F09G2.8, Probable phospholipase D F09G2.8, [Score=186, Expect=1e-52]} {Smed: dd_Smed_v6_1894_0_1, dd_Smed_v6_1894_0_1, [Score=191, Expect=2e-55]} {RNA1509_57216} {RNA1310_16414.2} {RNA815_7900}
5.	MligTC455_15576	262	5.46	Mlig455_020478	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_020478 {REF} {Length: 2716} {RNA1310_78488} {RNA815_27799}

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