TomoSeq data search

Data search

Results for MligTC455_23434

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23434

827

17.24

Mlig455_054723

Neo: -

Age: -

ATP13A1

Mlig455_054723 {REF} {Length: 2633} {Pfam: haloacid dehalogenase-like hydrolase [PF00702.28, score=45.1]; Cation transport ATPase (P-type) [PF13246.8, score=22.8]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [Score=598, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [Score=608, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [Score=617, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [Score=629, Expect=0.0]} {RNA1509_21971, RNA1509_32274, RNA1509_40340} {RNA1310_2715, RNA1509_32274, RNA1509_40340} {RNA1509_32274, RNA1509_40340, RNA815_777}

Cumulative graph for MligTC455_23434

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.614	4.377	0.22111	0.86405
RegionR2	0.136	4.377	0.77939	1.00000
RegionR3	0.314	4.377	0.42322	0.94563
RegionR4	0.498	4.377	0.23412	0.52828
RegionR5	0.566	4.377	0.10416	0.31351
RegionR6	0.139	4.377	0.73611	1.00000
RegionR7	0.732	4.377	0.13786	0.69562
RegionR8	-0.77	4.377	0.33787	0.97148

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.549	4.377	0.34584	1.00000
RegenerationR2	0.26	4.377	0.48508	0.86531
RegenerationR3	0.33	4.377	0.40406	0.80545
RegenerationR4	0.276	4.377	0.47048	0.85377
RegenerationR5	0.476	4.377	0.18489	0.61521
RegenerationR6	1.024	4.377	0.00981	0.12201
RegenerationBL	1.3	4.377	0.00413	0.05795
RegenerationTP	0.115	4.377	0.85010	1.00000

Genes with expression patterns similar to MligTC455_23434

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23434	827	17.24	Mlig455_054723	Neo: - Age: -	ATP13A1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_054723 {REF} {Length: 2633} {Pfam: haloacid dehalogenase-like hydrolase [PF00702.28, score=45.1]; Cation transport ATPase (P-type) [PF13246.8, score=22.8]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [Score=598, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [Score=608, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [Score=617, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [Score=629, Expect=0.0]} {RNA1509_21971, RNA1509_32274, RNA1509_40340} {RNA1310_2715, RNA1509_32274, RNA1509_40340} {RNA1509_32274, RNA1509_40340, RNA815_777}
2.	MligTC455_23433	830	17.29	Mlig455_054675	Neo: - Age: Down-Up-Down	ATP13A1	5.994	1.000	1.000	1.000	0.999	1.000	0.995	Mlig455_054675 {REF} {Length: 2346} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [Score=308, Expect=8e-97]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [Score=315, Expect=8e-99]} {Dmel: FBgn0027582, CG6230, [Score=300, Expect=2e-93]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [Score=300, Expect=1e-93]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [Score=304, Expect=4e-95]} {RNA1509_21971} {RNA1310_2715} {RNA815_777}
3.	MligTC455_23435	1599	33.32	Mlig455_006810, Mlig455_055193	Neo: - Age: logFC(26M/2M)=0.404	ATP13A1	5.764	0.999	0.992	0.883	0.983	0.990	0.917	Mlig455_006810 {REF} {Length: 4356} {Pfam: E1-E2 ATPase [PF00122.22, score=73.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=58.9]; Cation transport ATPase (P-type) [PF13246.8, score=22.3]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [RH, Score=1179, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [RH, Score=1186, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [RH, Score=1189, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [RH, Score=1109, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_21971, RNA1509_4822} {RNA1310_2715, RNA1509_21971, RNA1509_4822} {RNA1509_21971, RNA1509_4822, RNA815_777} Mlig455_055193 {REF} {Length: 5352} {Pfam: E1-E2 ATPase [PF00122.22, score=73.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=58.7]; Cation transport ATPase (P-type) [PF13246.8, score=22.3]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [RH, Score=1172, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [RH, Score=1173, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [RH, Score=1156, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [RH, Score=1088, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_4822} {RNA1310_2715} {RNA815_777}
4.	MligTC455_30136	1677	34.93	Mlig455_043470	Neo: - Age: -	CLUH	0.967	-	-	-	-	0.967	-	Mlig455_043470 {REF} {Length: 6289} {TRANSSPLICED} {Pfam: Clustered mitochondria [PF13236.8, score=232.4]; Translation initiation factor eIF3 subunit 135 [PF12807.9, score=115.2]; Tetratricopeptide repeat [PF13424.8, score=71.0]; Mitochondrial function, CLU-N-term [PF15044.8, score=45.3]; Tetratricopeptide repeat [PF13374.8, score=36.8]} {Human: ENSG00000132361, CLUH, clustered mitochondria homolog, [RH, Score=557, Expect=2e-175]} {Mouse: ENSMUSG00000020741, Cluh, clustered mitochondria (cluA/CLU1) homolog, [RH, Score=560, Expect=4e-176]} {Dmel: FBgn0034087, clu, clueless, [RH, Score=552, Expect=1e-171]} {Celegans: WBGene00000550, clu-1, Clustered mitochondria protein homolog, [RH, Score=597, Expect=0.0]} {Smed: dd_Smed_v6_1597_0_1, dd_Smed_v6_1597_0_1, [RH, Score=554, Expect=3e-174]} {RNA1509_1206, RNA1509_21894} {RNA1310_185.1, RNA1509_21894} {RNA1509_21894, RNA815_370}
5.	MligTC455_11992	547	11.4	Mlig455_070918	Neo: Irradiation Age: -		0.955	-	-	-	-	0.955	-	Mlig455_070918 {REF} {Length: 2532} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=30.1]} {RNA1509_24959, RNA1509_52445} {RNA1310_2279.2, RNA1509_24959} {RNA1509_24959, RNA815_17518}

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