TomoSeq data search

Data search

Results for MligTC455_23435

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23435

1599

33.32

Mlig455_006810, Mlig455_055193

Neo: -

Age: logFC(26M/2M)=0.404

ATP13A1

Mlig455_006810 {REF} {Length: 4356} {Pfam: E1-E2 ATPase [PF00122.22, score=73.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=58.9]; Cation transport ATPase (P-type) [PF13246.8, score=22.3]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [RH, Score=1179, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [RH, Score=1186, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [RH, Score=1189, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [RH, Score=1109, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_21971, RNA1509_4822} {RNA1310_2715, RNA1509_21971, RNA1509_4822} {RNA1509_21971, RNA1509_4822, RNA815_777}

Mlig455_055193 {REF} {Length: 5352} {Pfam: E1-E2 ATPase [PF00122.22, score=73.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=58.7]; Cation transport ATPase (P-type) [PF13246.8, score=22.3]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [RH, Score=1172, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [RH, Score=1173, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [RH, Score=1156, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [RH, Score=1088, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_4822} {RNA1310_2715} {RNA815_777}

Cumulative graph for MligTC455_23435

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.479	5.275	0.03948	0.48472
RegionR2	0.109	5.275	0.81452	1.00000
RegionR3	0.447	5.275	0.23722	0.77871
RegionR4	0.766	5.275	0.06659	0.23405
RegionR5	0.668	5.275	0.05561	0.20212
RegionR6	0.314	5.275	0.42169	0.98855
RegionR7	0.843	5.275	0.04649	0.41536
RegionR8	-0.667	5.275	0.30251	0.93347

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.185	5.275	0.14209	0.88178
RegenerationR2	0.258	5.275	0.50848	0.87484
RegenerationR3	0.228	5.275	0.57785	0.89787
RegenerationR4	0.275	5.275	0.50194	0.87053
RegenerationR5	0.557	5.275	0.15666	0.57805
RegenerationR6	0.902	5.275	0.02659	0.20422
RegenerationBL	1.281	5.275	0.00156	0.03073
RegenerationTP	0.047	5.275	0.92751	1.00000

Genes with expression patterns similar to MligTC455_23435

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23435	1599	33.32	Mlig455_006810, Mlig455_055193	Neo: - Age: logFC(26M/2M)=0.404	ATP13A1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006810 {REF} {Length: 4356} {Pfam: E1-E2 ATPase [PF00122.22, score=73.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=58.9]; Cation transport ATPase (P-type) [PF13246.8, score=22.3]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [RH, Score=1179, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [RH, Score=1186, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [RH, Score=1189, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [RH, Score=1109, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_21971, RNA1509_4822} {RNA1310_2715, RNA1509_21971, RNA1509_4822} {RNA1509_21971, RNA1509_4822, RNA815_777} Mlig455_055193 {REF} {Length: 5352} {Pfam: E1-E2 ATPase [PF00122.22, score=73.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=58.7]; Cation transport ATPase (P-type) [PF13246.8, score=22.3]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [RH, Score=1172, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [RH, Score=1173, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [RH, Score=1156, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [RH, Score=1088, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_4822} {RNA1310_2715} {RNA815_777}
2.	MligTC455_23434	827	17.24	Mlig455_054723	Neo: - Age: -	ATP13A1	5.764	0.999	0.992	0.883	0.983	0.990	0.917	Mlig455_054723 {REF} {Length: 2633} {Pfam: haloacid dehalogenase-like hydrolase [PF00702.28, score=45.1]; Cation transport ATPase (P-type) [PF13246.8, score=22.8]} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [Score=598, Expect=0.0]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [Score=608, Expect=0.0]} {Dmel: FBgn0027582, CG6230, [Score=617, Expect=0.0]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [Score=629, Expect=0.0]} {RNA1509_21971, RNA1509_32274, RNA1509_40340} {RNA1310_2715, RNA1509_32274, RNA1509_40340} {RNA1509_32274, RNA1509_40340, RNA815_777}
3.	MligTC455_23433	830	17.29	Mlig455_054675	Neo: - Age: Down-Up-Down	ATP13A1	5.763	0.999	0.992	0.883	0.983	0.990	0.916	Mlig455_054675 {REF} {Length: 2346} {Human: ENSG00000105726, ATP13A1, ATPase 13A1, [Score=308, Expect=8e-97]} {Mouse: ENSMUSG00000031862, Atp13a1, ATPase type 13A1, [Score=315, Expect=8e-99]} {Dmel: FBgn0027582, CG6230, [Score=300, Expect=2e-93]} {Celegans: WBGene00007514, catp-8, Probable manganese-transporting ATPase catp-8, [Score=300, Expect=1e-93]} {Smed: dd_Smed_v6_7119_0_1, dd_Smed_v6_7119_0_1, [Score=304, Expect=4e-95]} {RNA1509_21971} {RNA1310_2715} {RNA815_777}
4.	MligTC455_52591	1549	32.27	Mlig455_066162	Neo: - Age: -	COPB1	1.726	-	-	-	0.768	0.958	-	Mlig455_066162 {REF} {Length: 3986} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=361.8]; Coatomer beta subunit appendage platform [PF14806.8, score=189.4]; Coatomer beta C-terminal region [PF07718.14, score=183.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=39.9]; HEAT repeats [PF13646.8, score=30.8]; HEAT repeat [PF02985.24, score=22.5]; HEAT-like repeat [PF13513.8, score=21.1]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1321, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1326, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1219, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1103, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1180, Expect=0.0]} {RNA1509_1298} {RNA1310_2383} {RNA815_1794}
5.	MligTC455_22795	949	19.76	Mlig455_024439	Neo: - Age: -	D2HGDH	1.719	-	0.762	-	-	-	0.957	Mlig455_024439 {REF} {Length: 2313} {TRANSSPLICED} {Pfam: FAD linked oxidases, C-terminal domain [PF02913.21, score=184.7]; FAD binding domain [PF01565.25, score=128.8]} {Human: ENSG00000180902, D2HGDH, D-2-hydroxyglutarate dehydrogenase, [RH, Score=559, Expect=0.0]} {Mouse: ENSMUSG00000073609, D2hgdh, D-2-hydroxyglutarate dehydrogenase, [RH, Score=561, Expect=0.0]} {Dmel: FBgn0023507, D2hgdh, D-2-hydroxyglutaric acid dehydrogenase, [RH, Score=503, Expect=1e-174]} {Celegans: WBGene00010055, F54D5.12, [RH, Score=423, Expect=3e-144]} {Smed: dd_Smed_v6_6440_0_1, dd_Smed_v6_6440_0_1, [RH, Score=533, Expect=0.0]} {RNA1509_57878, RNA1509_7824} {RNA1310_15861, RNA1509_57878, RNA1509_7824} {RNA1509_57878, RNA1509_7824, RNA815_6139}
6.	MligTC455_40980	1615	33.66	Mlig455_063550	Neo: - Age: logFC(26M/2M)=0.168	SLC25A39	1.681	-	-	-	-	0.967	0.714	Mlig455_063550 {REF} {Length: 2105} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=164.6]} {Human: ENSG00000013306, SLC25A39, solute carrier family 25 member 39, [RH, Score=209, Expect=1e-63]} {Mouse: ENSMUSG00000054099, Slc25a40, solute carrier family 25, member 40, [Score=207, Expect=4e-63]; ENSMUSG00000018677, Slc25a39, solute carrier family 25, member 39, [Score=204, Expect=1e-61]} {Dmel: FBgn0031039, Shawn, [Score=209, Expect=1e-63]} {Celegans: WBGene00007622, C16C10.1, Uncharacterized mitochondrial carrier C16C10.1, [Score=202, Expect=3e-61]} {Smed: dd_Smed_v6_11353_0_1, dd_Smed_v6_11353_0_1, [Score=216, Expect=1e-66]} {RNA1509_21470, RNA1509_9535} {RNA1310_12330, RNA1509_21470, RNA1509_9535} {RNA1509_21470, RNA1509_9535, RNA815_13357}
7.	MligTC455_11992	547	11.4	Mlig455_070918	Neo: Irradiation Age: -		0.964	-	-	-	-	0.964	-	Mlig455_070918 {REF} {Length: 2532} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=30.1]} {RNA1509_24959, RNA1509_52445} {RNA1310_2279.2, RNA1509_24959} {RNA1509_24959, RNA815_17518}
8.	MligTC455_12517	587	12.23	Mlig455_023517	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-1.412		0.959	-	-	-	-	-	0.959	Mlig455_023517 {REF} {Length: 661} {RNA1509_22223} {RNA1310_60769} {RNA815_31256}

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