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Results for MligTC455_23442

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23442 2483 51.73 Mlig455_001500, Mlig455_001518

Neo: Irradiation

Age: -

Region-enriched R5: 1.368/0.00106

 AC007325.2, PRODH

Mlig455_001500 {REF} {Length: 4884} {Pfam: Proline dehydrogenase [PF01619.20, score=249.9]; HTH DNA binding domain [PF04967.14, score=18.4]} {Human: ENSG00000277196, AC007325.2, proline dehydrogenase 1, mitochondrial, [RH, Score=518, Expect=1e-176]; ENSG00000100033, PRODH, proline dehydrogenase 1, [RH, Score=518, Expect=2e-176]} {Mouse: ENSMUSG00000111321, Prodh, proline dehydrogenase, [RH, Score=511, Expect=6e-174]; ENSMUSG00000003526, Prodh, proline dehydrogenase, [RH, Score=511, Expect=6e-174]} {Dmel: FBgn0003423, slgA, sluggish A, [RH, Score=546, Expect=0.0]} {Celegans: WBGene00007197, B0513.5, Proline dehydrogenase 1, mitochondrial, [RH, Score=519, Expect=4e-177]} {Smed: dd_Smed_v6_7017_0_1, dd_Smed_v6_7017_0_1, [RH, Score=567, Expect=0.0]} {RNA1509_1886} {RNA1310_10174} {RNA815_398}

Mlig455_001518 {REF} {Length: 3271} {Pfam: Proline dehydrogenase [PF01619.20, score=249.8]; Winged helix-turn helix [PF13551.8, score=27.9]; Homeodomain-like domain [PF13565.8, score=25.2]; Helix-turn-helix domain [PF13518.8, score=19.3]; Homeodomain-like domain [PF13384.8, score=18.5]; HTH DNA binding domain [PF04967.14, score=18.4]} {Human: ENSG00000100033, PRODH, proline dehydrogenase 1, [RH, Score=516, Expect=5e-176]; ENSG00000277196, AC007325.2, proline dehydrogenase 1, mitochondrial, [RH, Score=516, Expect=4e-176]} {Mouse: ENSMUSG00000111321, Prodh, proline dehydrogenase, [RH, Score=508, Expect=8e-173]; ENSMUSG00000003526, Prodh, proline dehydrogenase, [RH, Score=508, Expect=8e-173]} {Dmel: FBgn0003423, slgA, sluggish A, [RH, Score=542, Expect=0.0]} {Celegans: WBGene00007197, B0513.5, Proline dehydrogenase 1, mitochondrial, [RH, Score=518, Expect=5e-177]} {Smed: dd_Smed_v6_7017_0_1, dd_Smed_v6_7017_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_1886} {RNA1310_10174} {RNA815_398}

Cumulative graph for MligTC455_23442

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.449 5.857 0.57978 1.00000
RegionR2 0.42 5.857 0.36623 0.76057
RegionR3 -0.282 5.857 0.47962 0.98254
RegionR4 0.328 5.857 0.46585 0.79364
RegionR5 1.368 5.857 0.00006 0.00106
RegionR6 -0.251 5.857 0.51676 1.00000
RegionR7 -0.389 5.857 0.36610 1.00000
RegionR8 -0.746 5.857 0.14009 0.68355

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.158 5.857 0.36187 1.00000
RegenerationR2 0.26 5.857 0.55804 0.89771
RegenerationR3 0.42 5.857 0.37986 0.79057
RegenerationR4 -0.133 5.857 0.78963 0.98357
RegenerationR5 -0.543 5.857 0.23673 0.67083
RegenerationR6 0.539 5.857 0.26179 0.61182
RegenerationBL 0.464 5.857 0.31079 0.67622
RegenerationTP -0.097 5.857 0.85012 1.00000


Genes with expression patterns similar to MligTC455_23442

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23442 2483 51.73 Mlig455_001500, Mlig455_001518

Neo: Irradiation

Age: -

Region-enriched R5: 1.368/0.00106

 AC007325.2, PRODH 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_001500 {REF} {Length: 4884} {Pfam: Proline dehydrogenase [PF01619.20, score=249.9]; HTH DNA binding domain [PF04967.14, score=18.4]} {Human: ENSG00000277196, AC007325.2, proline dehydrogenase 1, mitochondrial, [RH, Score=518, Expect=1e-176]; ENSG00000100033, PRODH, proline dehydrogenase 1, [RH, Score=518, Expect=2e-176]} {Mouse: ENSMUSG00000111321, Prodh, proline dehydrogenase, [RH, Score=511, Expect=6e-174]; ENSMUSG00000003526, Prodh, proline dehydrogenase, [RH, Score=511, Expect=6e-174]} {Dmel: FBgn0003423, slgA, sluggish A, [RH, Score=546, Expect=0.0]} {Celegans: WBGene00007197, B0513.5, Proline dehydrogenase 1, mitochondrial, [RH, Score=519, Expect=4e-177]} {Smed: dd_Smed_v6_7017_0_1, dd_Smed_v6_7017_0_1, [RH, Score=567, Expect=0.0]} {RNA1509_1886} {RNA1310_10174} {RNA815_398}

Mlig455_001518 {REF} {Length: 3271} {Pfam: Proline dehydrogenase [PF01619.20, score=249.8]; Winged helix-turn helix [PF13551.8, score=27.9]; Homeodomain-like domain [PF13565.8, score=25.2]; Helix-turn-helix domain [PF13518.8, score=19.3]; Homeodomain-like domain [PF13384.8, score=18.5]; HTH DNA binding domain [PF04967.14, score=18.4]} {Human: ENSG00000100033, PRODH, proline dehydrogenase 1, [RH, Score=516, Expect=5e-176]; ENSG00000277196, AC007325.2, proline dehydrogenase 1, mitochondrial, [RH, Score=516, Expect=4e-176]} {Mouse: ENSMUSG00000111321, Prodh, proline dehydrogenase, [RH, Score=508, Expect=8e-173]; ENSMUSG00000003526, Prodh, proline dehydrogenase, [RH, Score=508, Expect=8e-173]} {Dmel: FBgn0003423, slgA, sluggish A, [RH, Score=542, Expect=0.0]} {Celegans: WBGene00007197, B0513.5, Proline dehydrogenase 1, mitochondrial, [RH, Score=518, Expect=5e-177]} {Smed: dd_Smed_v6_7017_0_1, dd_Smed_v6_7017_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_1886} {RNA1310_10174} {RNA815_398}
2. MligTC455_45354 488 10.18 Mlig455_013363

Neo: -

Age: -

Region-enriched R5: 1.300/0.01786

 ZNF704 2.618 0.774 - - - 0.977 0.867 Mlig455_013363 {REF} {Length: 2297} {TRANSSPLICED} {Human: ENSG00000164684, ZNF704, zinc finger protein 704, [RH, Score=61.2, Expect=3e-10]} {Mouse: ENSMUSG00000040209, Zfp704, zinc finger protein 704, [RH, Score=61.6, Expect=2e-10]} {Dmel: FBgn0267336, Glut4EF, Glucose transporter 4 enhancer factor, [RH, Score=60.1, Expect=6e-10]} {Smed: dd_Smed_v6_3821_0_1, dd_Smed_v6_3821_0_1, [RH, Score=59.7, Expect=3e-10]} {RNA1509_16776} {RNA1310_10332, RNA1509_16776} {RNA1509_16776, RNA815_12218}
3. MligTC455_29900 461 9.61 Mlig455_067780

Neo: -

Age: -

Region-enriched R5: 1.688/0.03338

 1.733 - - 0.778 - 0.955 - Mlig455_067780 {REF} {Length: 7364} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=69.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=49.6]} {Smed: dd_Smed_v6_17939_1_1, dd_Smed_v6_17939_1_1, [RH, Score=92.4, Expect=4e-19]} {RNA1509_19505} {RNA1310_1707} {RNA815_8111}
4. MligTC455_28183 877 18.27 Mlig455_029275

Neo: Irradiation

Age: Up-Down-Down

 PIF1 0.963 - - - 0.963 - - Mlig455_029275 {REF} {Length: 11512} {Pfam: PIF1-like helicase [PF05970.16, score=120.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.4]; AAA domain [PF13604.8, score=54.2]; AAA domain [PF13245.8, score=28.8]; Helicase [PF02689.16, score=24.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=23.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=3e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=130, Expect=2e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=8e-30]} {RNA1509_16132, RNA1509_19556} {RNA1310_143.1, RNA1509_19556} {RNA1509_19556, RNA815_104.1}
5. MligTC455_28196 515 10.74 Mlig455_060468

Neo: Int S/G2/M

Age: Up-Down-Down

 PIF1 0.962 - - - 0.962 - - Mlig455_060468 {REF} {Length: 3356} {Pfam: PIF1-like helicase [PF05970.16, score=124.9]; AAA domain [PF13604.8, score=56.1]; AAA domain [PF13245.8, score=30.7]; Helicase [PF02689.16, score=28.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=26.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=3e-32]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=129, Expect=4e-31]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=2e-32]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=127, Expect=1e-30]} {RNA1509_16132} {RNA1310_143.1} {RNA815_104.1}
6. MligTC455_47954 283 5.9 Mlig455_062135

Neo: -

Age: -

 JOSD2 0.957 - - - - 0.957 - Mlig455_062135 {REF} {Length: 1176} {TRANSSPLICED} {Pfam: Josephin [PF02099.19, score=80.1]} {Human: ENSG00000161677, JOSD2, Josephin domain containing 2, [RH, Score=135, Expect=7e-40]} {Mouse: ENSMUSG00000038695, Josd2, Josephin domain containing 2, [RH, Score=134, Expect=2e-39]} {Dmel: FBgn0029853, CG3781, [RH, Score=129, Expect=3e-37]} {Celegans: WBGene00022190, josd-1, JOSephin Domain protein, [RH, Score=117, Expect=1e-33]} {Smed: dd_Smed_v6_2996_0_2, dd_Smed_v6_2996_0_2, [RH, Score=89.7, Expect=6e-21]} {RNA1509_24092, RNA1509_34733, RNA1509_42008} {RNA1310_19661, RNA1509_24092, RNA1509_34733, RNA1509_42008} {RNA1509_24092, RNA1509_34733, RNA1509_42008, RNA815_20150}
7. MligTC455_28188 1753 36.52 Mlig455_021453, Mlig455_055733

Neo: -

Age: Down-Up-Down

 PIF1 0.95 - - - 0.950 - -

Mlig455_021453 {REF} {Length: 14223} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=87.8]; PIF1-like helicase [PF05970.16, score=33.3]} {RNA1509_16132} {RNA1310_143.1} {RNA815_104.1}

Mlig455_055733 {REF} {Length: 12519} {Pfam: PIF1-like helicase [PF05970.16, score=87.7]; AAA domain [PF13604.8, score=46.6]; AAA domain [PF13245.8, score=32.6]; AAA domain [PF13479.8, score=18.5]; Helicase [PF02689.16, score=16.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=71.2, Expect=3e-13]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=72.0, Expect=9e-14]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=72.0, Expect=1e-13]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=72.0, Expect=6e-14]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=73.9, Expect=1e-14]} {RNA1509_16132, RNA1509_34118, RNA1509_35077, RNA1509_4409, RNA1509_45043, RNA1509_5424} {RNA1310_143.1, RNA1509_34118, RNA1509_35077, RNA1509_4409, RNA1509_45043, RNA1509_5424} {RNA1509_34118, RNA1509_35077, RNA1509_4409, RNA1509_45043, RNA1509_5424, RNA815_104.1}
8. MligTC455_44950 7633 159.02 Mlig455_035700, Mlig455_035793

Neo: -

Age: -

 MCEE 0.95 - - - 0.950 - -

Mlig455_035700 {REF} {Length: 1051} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=67.4]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=32.2]; Glyoxalase-like domain [PF13468.8, score=24.0]} {Human: ENSG00000124370, MCEE, methylmalonyl-CoA epimerase, [RH, Score=187, Expect=2e-60]} {Mouse: ENSMUSG00000033429, Mcee, methylmalonyl CoA epimerase, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00008415, mce-1, Methylmalonyl-CoA Epimerase; Mitochondrial methylmalonyl-CoA epimerase, [RH, Score=153, Expect=7e-48]} {Smed: dd_Smed_v6_3348_1_2, dd_Smed_v6_3348_1_2, [RH, Score=208, Expect=1e-69]} {RNA1509_2628} {RNA1310_20496.1} {RNA815_15365}

Mlig455_035793 {REF} {Length: 1052} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=67.4]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=32.2]; Glyoxalase-like domain [PF13468.8, score=24.0]} {Human: ENSG00000124370, MCEE, methylmalonyl-CoA epimerase, [RH, Score=187, Expect=2e-60]} {Mouse: ENSMUSG00000033429, Mcee, methylmalonyl CoA epimerase, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00008415, mce-1, Methylmalonyl-CoA Epimerase; Mitochondrial methylmalonyl-CoA epimerase, [RH, Score=153, Expect=7e-48]} {Smed: dd_Smed_v6_3348_1_2, dd_Smed_v6_3348_1_2, [RH, Score=208, Expect=1e-69]} {RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226} {RNA1310_20496.1, RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226} {RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226, RNA815_15365}

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