TomoSeq data search

Data search

Results for MligTC455_23459

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23459	723	15.07	Mlig455_001939	Neo: - Age: -	SLMAP	Mlig455_001939 {REF} {Length: 5300} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=62.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.4]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=271, Expect=2e-82]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=269, Expect=7e-79]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [RH, Score=208, Expect=9e-57]} {Celegans: WBGene00019766, M4.1, [RH, Score=217, Expect=6e-62]} {Smed: dd_Smed_v6_3763_0_1, dd_Smed_v6_3763_0_1, [RH, Score=271, Expect=1e-79]} {RNA1509_43982, RNA1509_49064, RNA1509_6493} {RNA1310_9441, RNA1509_43982, RNA1509_49064} {RNA1509_43982, RNA1509_49064, RNA815_3222}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23459

723

15.07

Mlig455_001939

Neo: -

Age: -

SLMAP

Mlig455_001939 {REF} {Length: 5300} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=62.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.4]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=271, Expect=2e-82]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=269, Expect=7e-79]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [RH, Score=208, Expect=9e-57]} {Celegans: WBGene00019766, M4.1, [RH, Score=217, Expect=6e-62]} {Smed: dd_Smed_v6_3763_0_1, dd_Smed_v6_3763_0_1, [RH, Score=271, Expect=1e-79]} {RNA1509_43982, RNA1509_49064, RNA1509_6493} {RNA1310_9441, RNA1509_43982, RNA1509_49064} {RNA1509_43982, RNA1509_49064, RNA815_3222}

Cumulative graph for MligTC455_23459

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.394	4.286	0.29079	0.94296
RegionR2	-0.269	4.286	0.57397	0.93209
RegionR3	0.417	4.286	0.25805	0.80167
RegionR4	0.596	4.286	0.17090	0.43473
RegionR5	0.666	4.286	0.04156	0.16399
RegionR6	-0.22	4.286	0.58734	1.00000
RegionR7	0.082	4.286	0.86485	1.00000
RegionR8	0.122	4.286	0.83287	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.189	4.286	0.31433	1.00000
RegenerationR2	0.51	4.286	0.15787	0.59456
RegenerationR3	-0.191	4.286	0.62371	0.91770
RegenerationR4	-0.111	4.286	0.78462	0.98244
RegenerationR5	-0.08	4.286	0.82190	0.99488
RegenerationR6	0.722	4.286	0.07325	0.33810
RegenerationBL	0.154	4.286	0.75299	1.00000
RegenerationTP	-0.672	4.286	0.23406	0.67987

Genes with expression patterns similar to MligTC455_23459

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23459	723	15.07	Mlig455_001939	Neo: - Age: -	SLMAP	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001939 {REF} {Length: 5300} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=62.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.4]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=271, Expect=2e-82]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=269, Expect=7e-79]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [RH, Score=208, Expect=9e-57]} {Celegans: WBGene00019766, M4.1, [RH, Score=217, Expect=6e-62]} {Smed: dd_Smed_v6_3763_0_1, dd_Smed_v6_3763_0_1, [RH, Score=271, Expect=1e-79]} {RNA1509_43982, RNA1509_49064, RNA1509_6493} {RNA1310_9441, RNA1509_43982, RNA1509_49064} {RNA1509_43982, RNA1509_49064, RNA815_3222}
2.	MligTC455_26676	227	4.74	Mlig455_053872	Neo: - Age: -	NR1I2	0.963	-	-	-	-	0.963	-	Mlig455_053872 {REF} {Length: 4019} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=78.8]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=118, Expect=9e-29]; ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=115, Expect=2e-27]} {Mouse: ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=113, Expect=6e-27]; ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=110, Expect=9e-26]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=120, Expect=9e-29]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=124, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=117, Expect=2e-28]} {RNA1509_13108, RNA1509_19586, RNA1509_34134} {RNA1310_13527, RNA1509_13108, RNA1509_19586, RNA1509_34134} {RNA1509_13108, RNA1509_19586, RNA1509_34134, RNA815_6207}
3.	MligTC455_52377	541	11.26	Mlig455_069932, Mlig455_069939	Neo: Int S/G2/M Age: -		0.954	-	-	-	-	0.954	-	Mlig455_069932 {REF} {Length: 1671} {TRANSSPLICED} {RNA1509_41731} {RNA1310_28989} {RNA815_37154} Mlig455_069939 {REF} {Length: 1669} {TRANSSPLICED} {RNA1509_41731} {RNA1310_28989, RNA1509_41731} {RNA1509_41731, RNA815_37154}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_23459

723

15.07

Mlig455_001939

Neo: -

Age: -

SLMAP

1.000

MligTC455_26676

227

4.74

Mlig455_053872

Neo: -

Age: -

NR1I2

0.963

Mlig455_053872 {REF} {Length: 4019} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=78.8]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=118, Expect=9e-29]; ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=115, Expect=2e-27]} {Mouse: ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=113, Expect=6e-27]; ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=110, Expect=9e-26]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=120, Expect=9e-29]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=124, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=117, Expect=2e-28]} {RNA1509_13108, RNA1509_19586, RNA1509_34134} {RNA1310_13527, RNA1509_13108, RNA1509_19586, RNA1509_34134} {RNA1509_13108, RNA1509_19586, RNA1509_34134, RNA815_6207}

MligTC455_52377

541

11.26

Mlig455_069932, Mlig455_069939

Neo: Int S/G2/M

Age: -

0.954

Mlig455_069932 {REF} {Length: 1671} {TRANSSPLICED} {RNA1509_41731} {RNA1310_28989} {RNA815_37154}

Mlig455_069939 {REF} {Length: 1669} {TRANSSPLICED} {RNA1509_41731} {RNA1310_28989, RNA1509_41731} {RNA1509_41731, RNA815_37154}