TomoSeq data search

Data search

Results for MligTC455_26676

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26676

227

4.74

Mlig455_053872

Neo: -

Age: -

NR1I2

Mlig455_053872 {REF} {Length: 4019} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=78.8]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=118, Expect=9e-29]; ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=115, Expect=2e-27]} {Mouse: ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=113, Expect=6e-27]; ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=110, Expect=9e-26]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=120, Expect=9e-29]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=124, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=117, Expect=2e-28]} {RNA1509_13108, RNA1509_19586, RNA1509_34134} {RNA1310_13527, RNA1509_13108, RNA1509_19586, RNA1509_34134} {RNA1509_13108, RNA1509_19586, RNA1509_34134, RNA815_6207}

Cumulative graph for MligTC455_26676

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.534	3.024	0.03726	0.47422
RegionR2	0.933	3.024	0.40421	0.79794
RegionR3	2.074	3.024	0.00444	0.08780
RegionR4	0.534	3.024	0.59418	0.90838
RegionR5	1.522	3.024	0.03728	0.15155
RegionR6	2.123	3.024	0.00437	0.10065
RegionR7	0.774	3.024	0.48916	1.00000
RegionR8	-0.427	3.024	0.94815	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.932	3.024	0.99974	1.00000
RegenerationR2	-0.337	3.024	0.62357	0.92425
RegenerationR3	-1.328	3.024	0.03552	0.33382
RegenerationR4	-1.119	3.024	0.09640	0.48201
RegenerationR5	-1.205	3.024	0.03402	0.30708
RegenerationR6	-0.816	3.024	0.18200	0.51701
RegenerationBL	-0.044	3.024	0.95903	1.00000
RegenerationTP	-0.976	3.024	0.47824	0.88665

Genes with expression patterns similar to MligTC455_26676

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26676	227	4.74	Mlig455_053872	Neo: - Age: -	NR1I2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053872 {REF} {Length: 4019} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=78.8]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=118, Expect=9e-29]; ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=115, Expect=2e-27]} {Mouse: ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=113, Expect=6e-27]; ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=110, Expect=9e-26]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=120, Expect=9e-29]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=124, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=117, Expect=2e-28]} {RNA1509_13108, RNA1509_19586, RNA1509_34134} {RNA1310_13527, RNA1509_13108, RNA1509_19586, RNA1509_34134} {RNA1509_13108, RNA1509_19586, RNA1509_34134, RNA815_6207}
2.	MligTC455_27590	776	16.16	Mlig455_052400, Mlig455_069548	Neo: - Age: logFC(26M/2M)=0.503		0.972	-	-	-	-	0.972	-	Mlig455_052400 {REF} {Length: 574} {RNA1509_47491} {RNA1310_60811} {RNA815_1602} Mlig455_069548 {REF} {Length: 877} {Pfam: Protein of unknown function (DUF445) [PF04286.14, score=23.1]} {RNA1509_47491} {RNA1310_60811} {RNA815_1602}
3.	MligTC455_23459	723	15.07	Mlig455_001939	Neo: - Age: -	SLMAP	0.963	-	-	-	-	0.963	-	Mlig455_001939 {REF} {Length: 5300} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=62.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.4]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=271, Expect=2e-82]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=269, Expect=7e-79]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [RH, Score=208, Expect=9e-57]} {Celegans: WBGene00019766, M4.1, [RH, Score=217, Expect=6e-62]} {Smed: dd_Smed_v6_3763_0_1, dd_Smed_v6_3763_0_1, [RH, Score=271, Expect=1e-79]} {RNA1509_43982, RNA1509_49064, RNA1509_6493} {RNA1310_9441, RNA1509_43982, RNA1509_49064} {RNA1509_43982, RNA1509_49064, RNA815_3222}
4.	MligTC455_44812	132	2.76	Mlig455_067856	Neo: - Age: logFC(26M/2M)=0.992	CD81	0.954	-	-	-	-	-	0.954	Mlig455_067856 {REF} {Length: 956} {Pfam: Tetraspanin family [PF00335.22, score=140.4]} {Human: ENSG00000110651, CD81, CD81 molecule, [RH, Score=97.8, Expect=9e-24]; ENSG00000143119, CD53, CD53 molecule, [RH, Score=94.0, Expect=1e-22]} {Mouse: ENSMUSG00000030342, Cd9, CD9 antigen, [RH, Score=102, Expect=8e-26]} {Dmel: FBgn0027865, Tsp96F, Tetraspanin 96F, [Score=98.2, Expect=8e-24]} {Celegans: WBGene00006634, tsp-8, Tetraspanin, [RH, Score=78.2, Expect=1e-16]} {Smed: dd_Smed_v6_6501_0_1, dd_Smed_v6_6501_0_1, [RH, Score=131, Expect=4e-37]} {RNA1310_37426} {RNA815_19158}
5.	MligTC455_38480	53	1.11	Mlig455_060125	Neo: - Age: Up-Down-Down	CDK19	0.951	-	-	-	-	-	0.951	Mlig455_060125 {REF} {Length: 5520} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=193.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=90.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.7]} {Human: ENSG00000155111, CDK19, cyclin dependent kinase 19, [Score=472, Expect=4e-162]; ENSG00000132964, CDK8, cyclin dependent kinase 8, [Score=469, Expect=1e-161]} {Mouse: ENSMUSG00000038481, Cdk19, cyclin-dependent kinase 19, [Score=471, Expect=5e-162]; ENSMUSG00000029635, Cdk8, cyclin-dependent kinase 8, [Score=470, Expect=3e-162]} {Dmel: FBgn0015618, Cdk8, Cyclin-dependent kinase 8, [Score=460, Expect=2e-158]} {Celegans: WBGene00000409, cdk-8, Cyclin-dependent kinase 8, [Score=414, Expect=1e-138]} {Smed: dd_Smed_v6_6004_0_2, dd_Smed_v6_6004_0_2, [Score=450, Expect=1e-154]} {RNA1509_29840} {RNA1310_20139} {RNA815_12999}

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