Data search
Results for MligTC455_23512
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23512 | 47 | 0.98 | Mlig455_020753 | Neo: - Age: - |
SLC38A9 | Mlig455_020753 {REF} {Length: 3583} {TRANSSPLICED} {Human: ENSG00000177058, SLC38A9, solute carrier family 38 member 9, [Score=156, Expect=2e-43]} {Mouse: ENSMUSG00000047789, Slc38a9, solute carrier family 38, member 9, [Score=159, Expect=4e-44]} {Celegans: WBGene00008774, F13H10.3, Sodium-coupled neutral amino acid transporter 9 homolog, [Score=132, Expect=3e-34]} {Smed: dd_Smed_v6_23596_0_1, dd_Smed_v6_23596_0_1, [Score=116, Expect=7e-31]} {RNA1509_56368} {RNA1310_9681.1} {RNA815_10166} |
Cumulative graph for MligTC455_23512
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.142 | 1.428 | 1.00000 | 1.00000 | |
| RegionR2 | -0.747 | 1.428 | 0.86662 | 1.00000 | |
| RegionR3 | 1.618 | 1.428 | 0.21016 | 0.75155 | |
| RegionR4 | 2.022 | 1.428 | 0.20664 | 0.48941 | |
| RegionR5 | 0.062 | 1.428 | 0.69375 | 1.00000 | |
| RegionR6 | 1.083 | 1.428 | 0.40034 | 0.97166 | |
| RegionR7 | -2.083 | 1.428 | 0.99984 | 1.00000 | |
| RegionR8 | -2.096 | 1.428 | 0.99982 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.882 | 1.428 | 0.99995 | 1.00000 | |
| RegenerationR2 | 1.848 | 1.428 | 0.12903 | 0.55407 | |
| RegenerationR3 | 0.957 | 1.428 | 0.41088 | 0.80926 | |
| RegenerationR4 | 1.973 | 1.428 | 0.12177 | 0.53150 | |
| RegenerationR5 | 2.912 | 1.428 | 0.00713 | 0.15400 | |
| RegenerationR6 | 2.34 | 1.428 | 0.03924 | 0.24774 | |
| RegenerationBL | 4.258 | 1.428 | 0.02132 | 0.15838 | |
| RegenerationTP | 2.776 | 1.428 | 0.31968 | 0.76478 |
Genes with expression patterns similar to MligTC455_23512
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23512 | 47 | 0.98 | Mlig455_020753 | Neo: - Age: - |
SLC38A9 | 3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_020753 {REF} {Length: 3583} {TRANSSPLICED} {Human: ENSG00000177058, SLC38A9, solute carrier family 38 member 9, [Score=156, Expect=2e-43]} {Mouse: ENSMUSG00000047789, Slc38a9, solute carrier family 38, member 9, [Score=159, Expect=4e-44]} {Celegans: WBGene00008774, F13H10.3, Sodium-coupled neutral amino acid transporter 9 homolog, [Score=132, Expect=3e-34]} {Smed: dd_Smed_v6_23596_0_1, dd_Smed_v6_23596_0_1, [Score=116, Expect=7e-31]} {RNA1509_56368} {RNA1310_9681.1} {RNA815_10166} |
| 2. | MligTC455_40772 | 633 | 13.18 | Mlig455_000911 | Neo: - Age: Up-Down-Down Region-enriched R3: 1.927/0.00277 |
BEST3 | 2.502 | - | - | - | 0.961 | 0.759 | 0.782 | Mlig455_000911 {REF} {Length: 2760} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=178.5]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=159, Expect=2e-41]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=162, Expect=2e-42]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=190, Expect=3e-52]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [Score=160, Expect=2e-42]} {Smed: dd_Smed_v6_2084_0_1, dd_Smed_v6_2084_0_1, [RH, Score=322, Expect=8e-105]} {RNA1509_44952} {RNA1310_13111} {RNA815_15310} |
| 3. | MligTC455_37064 | 5158 | 107.45 | Mlig455_024253, Mlig455_051570, Mlig455_055809 | Neo: - Age: logFC(26M/2M)=-0.286 |
SDK2 | 1.73 | - | - | - | 0.966 | - | 0.764 | Mlig455_024253 {REF} {Length: 1808} {Pfam: Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=72.8]; Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=63.3]} {Smed: dd_Smed_v6_1689_0_1, dd_Smed_v6_1689_0_1, [RH, Score=278, Expect=4e-92]} {RNA1509_16223, RNA1509_19677, RNA1509_25441} {RNA1310_22108, RNA1509_16223, RNA1509_19677, RNA1509_25441} {RNA1509_16223, RNA1509_19677, RNA1509_25441, RNA815_9104.1} Mlig455_051570 {REF} {Length: 4440} {Pfam: Fibronectin type III domain [PF00041.23, score=232.6]; Immunoglobulin I-set domain [PF07679.18, score=85.9]; Immunoglobulin domain [PF13927.8, score=72.1]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=71.8]; Immunoglobulin V-set domain [PF07686.19, score=42.6]; Immunoglobulin domain [PF13895.8, score=38.3]; Immunoglobulin domain [PF00047.27, score=35.2]; Glycosyl hydrolase family 36 C-terminal domain [PF16874.7, score=20.9]} {Human: ENSG00000069188, SDK2, sidekick cell adhesion molecule 2, [Score=330, Expect=4e-92]} {Mouse: ENSMUSG00000041592, Sdk2, sidekick cell adhesion molecule 2, [Score=325, Expect=1e-90]} {Dmel: FBgn0021764, sdk, sidekick, [Score=311, Expect=3e-86]} {Celegans: WBGene00004371, rig-4, Protein sidekick homolog, [Score=245, Expect=2e-65]} {Smed: dd_Smed_v6_4031_0_1, dd_Smed_v6_4031_0_1, [Score=134, Expect=1e-31]} {RNA1509_37157} {RNA1310_10115} {RNA815_23017} Mlig455_055809 {REF} {Length: 1657} {Pfam: Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=72.1]; Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=63.2]} {Smed: dd_Smed_v6_1689_0_1, dd_Smed_v6_1689_0_1, [RH, Score=281, Expect=5e-93]} {RNA1509_24086, RNA1509_27967, RNA1509_31849} {RNA1310_22108, RNA1509_24086, RNA1509_27967, RNA1509_31849} {RNA1509_24086, RNA1509_27967, RNA1509_31849, RNA815_9104.1} |
| 4. | MligTC455_32471 | 396 | 8.25 | Mlig455_010246 | Neo: - Age: Down-Down-Up Region-enriched R4: 1.797/0.02628 |
1.72 | - | - | - | 0.964 | - | 0.756 | Mlig455_010246 {REF} {Length: 1841} {RNA1509_19589, RNA1509_37340} {RNA1310_40610, RNA1509_19589, RNA1509_37340} {RNA1509_19589, RNA1509_37340, RNA815_19739} | |
| 5. | MligTC455_04549 | 296 | 6.16 | Mlig455_047043 | Neo: - Age: logFC(26M/2M)=0.556 Region-enriched R3: 2.204/0.00044 |
TYMP | 1.689 | - | - | - | 0.957 | - | 0.732 | Mlig455_047043 {REF} {Length: 2149} {TRANSSPLICED} {Pfam: Glycosyl transferase family, a/b domain [PF00591.23, score=114.4]; Glycosyl transferase family, helical bundle domain [PF02885.19, score=55.5]; Pyrimidine nucleoside phosphorylase C-terminal domain [PF07831.15, score=27.3]} {Human: ENSG00000025708, TYMP, thymidine phosphorylase, [RH, Score=324, Expect=7e-106]} {Mouse: ENSMUSG00000022615, Tymp, thymidine phosphorylase, [RH, Score=320, Expect=1e-104]} {Smed: dd_Smed_v6_869_0_1, dd_Smed_v6_869_0_1, [RH, Score=323, Expect=2e-106]} {RNA1509_12879} {RNA1310_13641} {RNA815_1859} |
| 6. | MligTC455_44645 | 563 | 11.72 | Mlig455_070220 | Neo: - Age: - |
SLC28A1 | 1.664 | - | - | - | 0.952 | - | 0.712 | Mlig455_070220 {REF} {Length: 2524} {Pfam: Na+ dependent nucleoside transporter C-terminus [PF07662.15, score=236.4]; Na+ dependent nucleoside transporter N-terminus [PF01773.22, score=73.8]; Nucleoside recognition [PF07670.16, score=23.7]} {Human: ENSG00000156222, SLC28A1, solute carrier family 28 member 1, [RH, Score=377, Expect=7e-123]; ENSG00000137860, SLC28A2, solute carrier family 28 member 2, [RH, Score=369, Expect=3e-119]} {Mouse: ENSMUSG00000027219, Slc28a2, solute carrier family 28 (sodium-coupled nucleoside transporter), member 2, [RH, Score=385, Expect=6e-126]; ENSMUSG00000025726, Slc28a1, solute carrier family 28 (sodium-coupled nucleoside transporter), member 1, [RH, Score=377, Expect=1e-122]} {Dmel: FBgn0025709, CNT2, Concentrative nucleoside transporter 2, [Score=300, Expect=5e-94]} {Celegans: WBGene00017868, slc-28.2, Sodium/nucleoside cotransporter, [RH, Score=240, Expect=2e-71]} {Smed: dd_Smed_v6_3508_0_1, dd_Smed_v6_3508_0_1, [Score=456, Expect=3e-154]} {RNA1509_20711, RNA1509_21619, RNA1509_48971} {RNA1310_7732, RNA1509_20711, RNA1509_21619, RNA1509_48971} {RNA1509_20711, RNA1509_21619, RNA1509_48971, RNA815_2578} |
| 7. | MligTC455_11718 | 110 | 2.3 | Mlig455_009100 | Neo: - Age: - Region-enriched R4: 2.495/0.04544 |
0.995 | - | - | - | 0.995 | - | - | Mlig455_009100 {REF} {Length: 1916} {TRANSSPLICED} {RNA1509_23206} {RNA1310_55434} {RNA815_29179} | |
| 8. | MligTC455_50788 | 55 | 1.14 | Mlig455_001945 | Neo: - Age: Down-Up-Up Region-enriched R4: 4.857/0.00120 |
GATA6 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_001945 {REF} {Length: 1855} {tRNA: Val(CAC),pseudo, score=26.6} {Pfam: GATA zinc finger [PF00320.29, score=52.2]; TFIIB zinc-binding [PF08271.14, score=20.7]} {Human: ENSG00000141448, GATA6, GATA binding protein 6, [Score=87.8, Expect=1e-18]; ENSG00000136574, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]; ENSG00000285109, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]} {Mouse: ENSMUSG00000005836, Gata6, GATA binding protein 6, [Score=87.0, Expect=2e-18]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [Score=85.5, Expect=4e-18]} {Dmel: FBgn0032223, GATAd, [RH, Score=87.0, Expect=1e-18]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_4075_0_1, dd_Smed_v6_4075_0_1, [Score=80.5, Expect=9e-17]} {RNA1509_47157} {RNA1310_45834} {RNA815_33962} |
| 9. | MligTC455_36696 | 1081 | 22.51 | Mlig455_029781, Mlig455_029931 | Neo: Irradiation Age: - Region-specific R5: 3.121 Region-enriched R5: 2.340/0.00000 |
NOTCH1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_029781 {REF} {Length: 5944} {Pfam: EGF-like domain [PF00008.29, score=196.5]; Ankyrin repeats (3 copies) [PF12796.9, score=151.2]; Human growth factor-like EGF [PF12661.9, score=101.4]; Ankyrin repeat [PF00023.32, score=79.2]; Ankyrin repeat [PF13606.8, score=73.4]; Ankyrin repeats (many copies) [PF13857.8, score=70.0]; Ankyrin repeats (many copies) [PF13637.8, score=66.1]; LNR domain [PF00066.19, score=63.4]; EGF-like domain [PF07974.15, score=53.4]; Calcium-binding EGF domain [PF07645.17, score=32.5]; Alliinase EGF-like domain [PF04863.15, score=23.6]; EGF domain [PF12947.9, score=19.7]} {Human: ENSG00000148400, NOTCH1, notch 1, [RH, Score=529, Expect=6e-156]; ENSG00000234876, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000223355, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000235396, NOTCH4, notch 4, [RH, Score=518, Expect=6e-154]; ENSG00000204301, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000232339, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000206312, NOTCH4, notch 4, [RH, Score=516, Expect=3e-153]; ENSG00000074181, NOTCH3, notch 3, [RH, Score=515, Expect=1e-151]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [RH, Score=526, Expect=2e-155]} {Dmel: FBgn0004647, N, Notch, [RH, Score=541, Expect=4e-160]} {Celegans: WBGene00001609, glp-1, [RH, Score=262, Expect=5e-71]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [RH, Score=386, Expect=2e-109]} {RNA1509_4917} {RNA1310_700} {RNA815_15747} Mlig455_029931 {REF} {Length: 6142} {Pfam: EGF-like domain [PF00008.29, score=185.5]; Ankyrin repeats (3 copies) [PF12796.9, score=151.2]; Human growth factor-like EGF [PF12661.9, score=95.1]; Ankyrin repeat [PF00023.32, score=79.2]; Ankyrin repeat [PF13606.8, score=73.5]; Ankyrin repeats (many copies) [PF13857.8, score=70.1]; Ankyrin repeats (many copies) [PF13637.8, score=66.0]; EGF-like domain [PF07974.15, score=63.3]; LNR domain [PF00066.19, score=62.5]; Calcium-binding EGF domain [PF07645.17, score=32.8]; Alliinase EGF-like domain [PF04863.15, score=23.6]; EGF domain [PF12947.9, score=19.8]} {Human: ENSG00000148400, NOTCH1, notch 1, [RH, Score=527, Expect=2e-155]; ENSG00000234876, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000204301, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000223355, NOTCH4, notch 4, [RH, Score=520, Expect=3e-154]; ENSG00000232339, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000235396, NOTCH4, notch 4, [RH, Score=519, Expect=4e-154]; ENSG00000206312, NOTCH4, notch 4, [RH, Score=516, Expect=3e-153]; ENSG00000074181, NOTCH3, notch 3, [RH, Score=511, Expect=2e-150]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [RH, Score=546, Expect=5e-162]; ENSMUSG00000038146, Notch3, notch 3, [RH, Score=521, Expect=8e-154]} {Dmel: FBgn0004647, N, Notch, [RH, Score=588, Expect=3e-176]} {Celegans: WBGene00003001, lin-12, [RH, Score=282, Expect=4e-77]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=388, Expect=4e-110]} {RNA1509_4917} {RNA1310_700, RNA1509_4917} {RNA1509_4917, RNA815_15747} |
| 10. | MligTC455_51484 | 172 | 3.59 | Mlig455_019492 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.072/0.02519 |
PXMP2 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_019492 {REF} {Length: 2315} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=68.0]} {Human: ENSG00000176894, PXMP2, peroxisomal membrane protein 2, [RH, Score=105, Expect=7e-28]} {Mouse: ENSMUSG00000029499, Pxmp2, peroxisomal membrane protein 2, [RH, Score=115, Expect=6e-32]} {Dmel: FBgn0035252, CG7970, [RH, Score=84.7, Expect=8e-20]} {Smed: dd_Smed_v6_13953_0_1, dd_Smed_v6_13953_0_1, [Score=74.3, Expect=1e-16]} {RNA1509_31026, RNA1509_52775, RNA1509_55300} {RNA1310_31383.1, RNA1509_52775, RNA1509_55300} {RNA1509_52775, RNA1509_55300, RNA815_20167} |
| 11. | MligTC455_29382 | 141 | 2.94 | Mlig455_032367, Mlig455_068516 | Neo: - Age: Up-Down-Down |
0.956 | - | - | - | 0.956 | - | - | Mlig455_032367 {REF} {Length: 11082} {RNA1509_34218, RNA1509_44206} {RNA1310_18727, RNA1509_34218} {RNA1509_34218, RNA815_16176.1} Mlig455_068516 {REF} {Length: 2460} {RNA1509_38155} {RNA1310_16376} {RNA815_12881} |
|
| 12. | MligTC455_29886 | 979 | 20.4 | Mlig455_029016 | Neo: - Age: logFC(26M/2M)=-0.339 Region-enriched R3: 1.707/0.00111 |
0.955 | - | - | - | 0.955 | - | - | Mlig455_029016 {REF} {Length: 2165} {TRANSSPLICED} {Pfam: Innexin [PF00876.20, score=364.0]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=121, Expect=1e-30]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=304, Expect=3e-100]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=305, Expect=3e-100]} {RNA1509_19970, RNA1509_32682, RNA1509_39326, RNA1509_47177, RNA1509_50541} {RNA1310_23805, RNA1509_19970, RNA1509_32682, RNA1509_39326, RNA1509_47177, RNA1509_50541} {RNA1509_19970, RNA1509_32682, RNA1509_39326, RNA1509_47177, RNA1509_50541, RNA815_9290} | |
| 13. | MligTC455_18887 | 333 | 6.93 | Mlig455_045886 | Neo: - Age: - Region-enriched R3: 2.872/0.03772 |
HRASLS | 0.953 | - | - | - | 0.953 | - | - | Mlig455_045886 {REF} {Length: 1499} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.0]; PPPDE putative peptidase domain [PF05903.16, score=19.7]} {Human: ENSG00000127252, HRASLS, HRAS like suppressor, [Score=48.5, Expect=5e-06]} {Celegans: WBGene00009460, ubr-5, UBR E3 ubiquitin ligase homolog, [Score=51.2, Expect=6e-07]} {RNA1509_26414} {RNA1310_26632.1, RNA1509_26414} {RNA1509_26414, RNA815_21681} |
| 14. | MligTC455_47668 | 400 | 8.33 | Mlig455_070881 | Neo: - Age: - Regeneration-upregulated R4: 2.320 Regeneration-enriched R4: 2.320 |
SLC39A14 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_070881 {REF} {Length: 2614} {Pfam: ZIP Zinc transporter [PF02535.24, score=209.3]} {Human: ENSG00000104635, SLC39A14, solute carrier family 39 member 14, [Score=253, Expect=2e-78]} {Mouse: ENSMUSG00000022094, Slc39a14, solute carrier family 39 (zinc transporter), member 14, [Score=248, Expect=6e-77]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=157, Expect=3e-42]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=216, Expect=2e-65]} {Smed: dd_Smed_v6_8605_0_1, dd_Smed_v6_8605_0_1, [Score=281, Expect=4e-90]} {RNA1509_23164} {RNA1310_12163.1} {RNA815_4574} |