Data search


search
Exact
Search

Results for MligTC455_37064

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37064 5158 107.45 Mlig455_024253, Mlig455_051570, Mlig455_055809

Neo: -

Age: logFC(26M/2M)=-0.286

SDK2

Mlig455_024253 {REF} {Length: 1808} {Pfam: Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=72.8]; Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=63.3]} {Smed: dd_Smed_v6_1689_0_1, dd_Smed_v6_1689_0_1, [RH, Score=278, Expect=4e-92]} {RNA1509_16223, RNA1509_19677, RNA1509_25441} {RNA1310_22108, RNA1509_16223, RNA1509_19677, RNA1509_25441} {RNA1509_16223, RNA1509_19677, RNA1509_25441, RNA815_9104.1}

Mlig455_051570 {REF} {Length: 4440} {Pfam: Fibronectin type III domain [PF00041.23, score=232.6]; Immunoglobulin I-set domain [PF07679.18, score=85.9]; Immunoglobulin domain [PF13927.8, score=72.1]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=71.8]; Immunoglobulin V-set domain [PF07686.19, score=42.6]; Immunoglobulin domain [PF13895.8, score=38.3]; Immunoglobulin domain [PF00047.27, score=35.2]; Glycosyl hydrolase family 36 C-terminal domain [PF16874.7, score=20.9]} {Human: ENSG00000069188, SDK2, sidekick cell adhesion molecule 2, [Score=330, Expect=4e-92]} {Mouse: ENSMUSG00000041592, Sdk2, sidekick cell adhesion molecule 2, [Score=325, Expect=1e-90]} {Dmel: FBgn0021764, sdk, sidekick, [Score=311, Expect=3e-86]} {Celegans: WBGene00004371, rig-4, Protein sidekick homolog, [Score=245, Expect=2e-65]} {Smed: dd_Smed_v6_4031_0_1, dd_Smed_v6_4031_0_1, [Score=134, Expect=1e-31]} {RNA1509_37157} {RNA1310_10115} {RNA815_23017}

Mlig455_055809 {REF} {Length: 1657} {Pfam: Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=72.1]; Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=63.2]} {Smed: dd_Smed_v6_1689_0_1, dd_Smed_v6_1689_0_1, [RH, Score=281, Expect=5e-93]} {RNA1509_24086, RNA1509_27967, RNA1509_31849} {RNA1310_22108, RNA1509_24086, RNA1509_27967, RNA1509_31849} {RNA1509_24086, RNA1509_27967, RNA1509_31849, RNA815_9104.1}

Cumulative graph for MligTC455_37064

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.553 6.937 0.03907 0.48281
RegionR2 0.379 6.937 0.65627 0.98937
RegionR3 1.972 6.937 0.00243 0.05740
RegionR4 1.256 6.937 0.09946 0.30645
RegionR5 1.548 6.937 0.01380 0.07334
RegionR6 1.836 6.937 0.00576 0.11814
RegionR7 -1.246 6.937 0.11647 0.64516
RegionR8 -3.191 6.937 0.00329 0.10062

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.303 6.937 0.09241 0.80143
RegenerationR2 -0.318 6.937 0.71976 0.96301
RegenerationR3 -0.235 6.937 0.78973 0.97879
RegenerationR4 0.372 6.937 0.68330 0.94655
RegenerationR5 0.934 6.937 0.29562 0.72295
RegenerationR6 0.289 6.937 0.74196 0.94810
RegenerationBL 0.16 6.937 0.84427 1.00000
RegenerationTP 1.426 6.937 0.13650 0.55401


Genes with expression patterns similar to MligTC455_37064

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37064 5158 107.45 Mlig455_024253, Mlig455_051570, Mlig455_055809

Neo: -

Age: logFC(26M/2M)=-0.286

SDK2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_024253 {REF} {Length: 1808} {Pfam: Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=72.8]; Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=63.3]} {Smed: dd_Smed_v6_1689_0_1, dd_Smed_v6_1689_0_1, [RH, Score=278, Expect=4e-92]} {RNA1509_16223, RNA1509_19677, RNA1509_25441} {RNA1310_22108, RNA1509_16223, RNA1509_19677, RNA1509_25441} {RNA1509_16223, RNA1509_19677, RNA1509_25441, RNA815_9104.1}

Mlig455_051570 {REF} {Length: 4440} {Pfam: Fibronectin type III domain [PF00041.23, score=232.6]; Immunoglobulin I-set domain [PF07679.18, score=85.9]; Immunoglobulin domain [PF13927.8, score=72.1]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=71.8]; Immunoglobulin V-set domain [PF07686.19, score=42.6]; Immunoglobulin domain [PF13895.8, score=38.3]; Immunoglobulin domain [PF00047.27, score=35.2]; Glycosyl hydrolase family 36 C-terminal domain [PF16874.7, score=20.9]} {Human: ENSG00000069188, SDK2, sidekick cell adhesion molecule 2, [Score=330, Expect=4e-92]} {Mouse: ENSMUSG00000041592, Sdk2, sidekick cell adhesion molecule 2, [Score=325, Expect=1e-90]} {Dmel: FBgn0021764, sdk, sidekick, [Score=311, Expect=3e-86]} {Celegans: WBGene00004371, rig-4, Protein sidekick homolog, [Score=245, Expect=2e-65]} {Smed: dd_Smed_v6_4031_0_1, dd_Smed_v6_4031_0_1, [Score=134, Expect=1e-31]} {RNA1509_37157} {RNA1310_10115} {RNA815_23017}

Mlig455_055809 {REF} {Length: 1657} {Pfam: Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=72.1]; Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=63.2]} {Smed: dd_Smed_v6_1689_0_1, dd_Smed_v6_1689_0_1, [RH, Score=281, Expect=5e-93]} {RNA1509_24086, RNA1509_27967, RNA1509_31849} {RNA1310_22108, RNA1509_24086, RNA1509_27967, RNA1509_31849} {RNA1509_24086, RNA1509_27967, RNA1509_31849, RNA815_9104.1}
2. MligTC455_36727 2161 45.01 Mlig455_013407, Mlig455_013448

Neo: -

Age: logFC(26M/2M)=-0.438

Region-enriched R3: 1.447/0.00030

4.09 - 0.844 0.959 0.754 0.717 0.816

Mlig455_013407 {REF} {Length: 3635} {RNA1509_12599, RNA1509_16053, RNA1509_17696, RNA1509_23340, RNA1509_38884, RNA1509_44611} {RNA1310_1688.1, RNA1509_12599, RNA1509_16053, RNA1509_17696, RNA1509_23340, RNA1509_38884, RNA1509_44611} {RNA1509_12599, RNA1509_16053, RNA1509_17696, RNA1509_23340, RNA1509_38884, RNA1509_44611, RNA815_14547}

Mlig455_013448 {REF} {Length: 3532} {RNA1509_17696} {RNA1310_1688.1} {RNA815_14547}
3. MligTC455_40772 633 13.18 Mlig455_000911

Neo: -

Age: Up-Down-Down

Region-enriched R3: 1.927/0.00277

BEST3 4.081 - 0.770 0.837 0.977 0.700 0.797 Mlig455_000911 {REF} {Length: 2760} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=178.5]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=159, Expect=2e-41]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=162, Expect=2e-42]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=190, Expect=3e-52]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [Score=160, Expect=2e-42]} {Smed: dd_Smed_v6_2084_0_1, dd_Smed_v6_2084_0_1, [RH, Score=322, Expect=8e-105]} {RNA1509_44952} {RNA1310_13111} {RNA815_15310}
4. MligTC455_18887 333 6.93 Mlig455_045886

Neo: -

Age: -

Region-enriched R3: 2.872/0.03772

HRASLS 4.06 - 0.757 0.885 0.955 0.726 0.737 Mlig455_045886 {REF} {Length: 1499} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.0]; PPPDE putative peptidase domain [PF05903.16, score=19.7]} {Human: ENSG00000127252, HRASLS, HRAS like suppressor, [Score=48.5, Expect=5e-06]} {Celegans: WBGene00009460, ubr-5, UBR E3 ubiquitin ligase homolog, [Score=51.2, Expect=6e-07]} {RNA1509_26414} {RNA1310_26632.1, RNA1509_26414} {RNA1509_26414, RNA815_21681}
5. MligTC455_41361 18384 383 Mlig455_049617

Neo: -

Age: -

Region-enriched R6: 1.414/0.03193
Region-enriched R3: 1.293/0.04497
Region-enriched R5: 1.178/0.02846

3.982 - 0.734 0.811 0.951 0.764 0.722 Mlig455_049617 {REF} {Length: 877} {Pfam: Type III secretion system lipoprotein chaperone (YscW) [PF09619.12, score=33.8]} {RNA1509_1058} {RNA1310_44094} {RNA815_10777.1}
6. MligTC455_35940 1726 35.96 Mlig455_047816, Mlig455_047890

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.364

Region-enriched R4: 1.864/0.00055
Region-enriched R5: 1.381/0.00285

SLC5A3 3.516 - 0.895 - 0.860 0.807 0.954

Mlig455_047816 {REF} {Length: 2787} {Pfam: Sodium:solute symporter family [PF00474.19, score=419.0]} {Human: ENSG00000198743, SLC5A3, solute carrier family 5 member 3, [RH, Score=624, Expect=0.0]} {Mouse: ENSMUSG00000089774, Slc5a3, solute carrier family 5 (inositol transporters), member 3, [RH, Score=626, Expect=0.0]} {Dmel: FBgn0037895, CG6723, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00014092, ZK822.5, [Score=68.9, Expect=6e-12]} {Smed: dd_Smed_v6_6415_0_1, dd_Smed_v6_6415_0_1, [RH, Score=671, Expect=0.0]} {RNA1509_19277, RNA1509_50334} {RNA1310_7118, RNA1509_50334} {RNA1509_50334, RNA815_3284}

Mlig455_047890 {REF} {Length: 3125} {Pfam: Sodium:solute symporter family [PF00474.19, score=419.0]} {Human: ENSG00000198743, SLC5A3, solute carrier family 5 member 3, [RH, Score=625, Expect=0.0]} {Mouse: ENSMUSG00000089774, Slc5a3, solute carrier family 5 (inositol transporters), member 3, [RH, Score=627, Expect=0.0]} {Dmel: FBgn0037895, CG6723, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00014092, ZK822.5, [Score=68.6, Expect=8e-12]} {Smed: dd_Smed_v6_6415_0_1, dd_Smed_v6_6415_0_1, [RH, Score=674, Expect=0.0]} {RNA1509_19277} {RNA1310_7118, RNA1509_19277} {RNA1509_19277, RNA815_3284}
7. MligTC455_52685 4195 87.39 Mlig455_048797

Neo: -

Age: -

Region-enriched R6: 2.012/0.00457

PLAC8 3.322 - - 0.729 0.958 0.884 0.751 Mlig455_048797 {REF} {Length: 936} {Pfam: PLAC8 family [PF04749.19, score=75.7]} {Human: ENSG00000145287, PLAC8, placenta specific 8, [Score=51.6, Expect=4e-09]} {Smed: dd_Smed_v6_1291_0_1, dd_Smed_v6_1291_0_1, [RH, Score=111, Expect=2e-33]} {RNA1509_18847, RNA1509_21936, RNA1509_25827, RNA1509_6243} {RNA1310_32231.1, RNA1509_18847, RNA1509_21936, RNA1509_25827, RNA1509_6243} {RNA1509_18847, RNA1509_21936, RNA1509_25827, RNA1509_6243, RNA815_23825}
8. MligTC455_29886 979 20.4 Mlig455_029016

Neo: -

Age: logFC(26M/2M)=-0.339

Region-enriched R3: 1.707/0.00111

3.259 - 0.838 - 0.973 0.701 0.747 Mlig455_029016 {REF} {Length: 2165} {TRANSSPLICED} {Pfam: Innexin [PF00876.20, score=364.0]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=121, Expect=1e-30]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=304, Expect=3e-100]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=305, Expect=3e-100]} {RNA1509_19970, RNA1509_32682, RNA1509_39326, RNA1509_47177, RNA1509_50541} {RNA1310_23805, RNA1509_19970, RNA1509_32682, RNA1509_39326, RNA1509_47177, RNA1509_50541} {RNA1509_19970, RNA1509_32682, RNA1509_39326, RNA1509_47177, RNA1509_50541, RNA815_9290}
9. MligTC455_48035 2027 42.24 Mlig455_023759

Neo: -

Age: -

2.503 - - 0.807 0.969 0.727 - Mlig455_023759 {REF} {Length: 770} {NoTransDecoderORF} {RNA1509_40830} {RNA1310_16528.1, RNA1509_40830} {RNA1509_40830, RNA815_31871}
10. MligTC455_44645 563 11.72 Mlig455_070220

Neo: -

Age: -

SLC28A1 2.428 - - - 0.953 0.759 0.716 Mlig455_070220 {REF} {Length: 2524} {Pfam: Na+ dependent nucleoside transporter C-terminus [PF07662.15, score=236.4]; Na+ dependent nucleoside transporter N-terminus [PF01773.22, score=73.8]; Nucleoside recognition [PF07670.16, score=23.7]} {Human: ENSG00000156222, SLC28A1, solute carrier family 28 member 1, [RH, Score=377, Expect=7e-123]; ENSG00000137860, SLC28A2, solute carrier family 28 member 2, [RH, Score=369, Expect=3e-119]} {Mouse: ENSMUSG00000027219, Slc28a2, solute carrier family 28 (sodium-coupled nucleoside transporter), member 2, [RH, Score=385, Expect=6e-126]; ENSMUSG00000025726, Slc28a1, solute carrier family 28 (sodium-coupled nucleoside transporter), member 1, [RH, Score=377, Expect=1e-122]} {Dmel: FBgn0025709, CNT2, Concentrative nucleoside transporter 2, [Score=300, Expect=5e-94]} {Celegans: WBGene00017868, slc-28.2, Sodium/nucleoside cotransporter, [RH, Score=240, Expect=2e-71]} {Smed: dd_Smed_v6_3508_0_1, dd_Smed_v6_3508_0_1, [Score=456, Expect=3e-154]} {RNA1509_20711, RNA1509_21619, RNA1509_48971} {RNA1310_7732, RNA1509_20711, RNA1509_21619, RNA1509_48971} {RNA1509_20711, RNA1509_21619, RNA1509_48971, RNA815_2578}
11. MligTC455_36954 2263 47.15 Mlig455_041278

Neo: -

Age: logFC(26M/2M)=-0.220

Region-enriched R3: 1.232/0.02876

MARC1 1.808 - - - 0.953 - 0.855 Mlig455_041278 {REF} {Length: 2109} {Pfam: MOSC N-terminal beta barrel domain [PF03476.18, score=77.0]; MOSC domain [PF03473.19, score=67.6]} {Human: ENSG00000186205, MARC1, mitochondrial amidoxime reducing component 1, [RH, Score=114, Expect=1e-28]} {Mouse: ENSMUSG00000026621, Marc1, mitochondrial amidoxime reducing component 1, [RH, Score=118, Expect=3e-30]; ENSMUSG00000073481, Marc2, mitochondrial amidoxime reducing component 2, [RH, Score=116, Expect=2e-29]} {Dmel: FBgn0033451, CG1665, [RH, Score=81.6, Expect=3e-17]} {Celegans: WBGene00018758, F53E10.1, [RH, Score=98.2, Expect=4e-23]} {Smed: dd_Smed_v6_7493_0_1, dd_Smed_v6_7493_0_1, [Score=63.2, Expect=3e-11]} {RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542} {RNA1310_14706.1, RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542} {RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542, RNA815_10847}
12. MligTC455_47078 3486 72.63 Mlig455_044006

Neo: -

Age: -

SUSD2 1.808 - - - 0.953 - 0.855 Mlig455_044006 {REF} {Length: 7109} {Pfam: AMOP domain [PF03782.19, score=49.3]; Nidogen-like [PF06119.16, score=26.9]; von Willebrand factor type D domain [PF00094.27, score=21.6]} {Human: ENSG00000099994, SUSD2, sushi domain containing 2, [Score=121, Expect=2e-27]} {Mouse: ENSMUSG00000006342, Susd2, sushi domain containing 2, [RH, Score=120, Expect=3e-27]} {Dmel: FBgn0051004, mesh, [Score=156, Expect=4e-38]} {Celegans: WBGene00010540, K03H1.5, [RH, Score=89.7, Expect=1e-17]} {RNA1509_1950} {RNA1310_1759.1} {RNA815_1026}
13. MligTC455_11718 110 2.3 Mlig455_009100

Neo: -

Age: -

Region-enriched R4: 2.495/0.04544

1.739 - - - 0.982 - 0.757 Mlig455_009100 {REF} {Length: 1916} {TRANSSPLICED} {RNA1509_23206} {RNA1310_55434} {RNA815_29179}
14. MligTC455_47668 400 8.33 Mlig455_070881

Neo: -

Age: -

Regeneration-upregulated R4: 2.320

Regeneration-enriched R4: 2.320

SLC39A14 1.733 - - 0.779 0.954 - - Mlig455_070881 {REF} {Length: 2614} {Pfam: ZIP Zinc transporter [PF02535.24, score=209.3]} {Human: ENSG00000104635, SLC39A14, solute carrier family 39 member 14, [Score=253, Expect=2e-78]} {Mouse: ENSMUSG00000022094, Slc39a14, solute carrier family 39 (zinc transporter), member 14, [Score=248, Expect=6e-77]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=157, Expect=3e-42]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=216, Expect=2e-65]} {Smed: dd_Smed_v6_8605_0_1, dd_Smed_v6_8605_0_1, [Score=281, Expect=4e-90]} {RNA1509_23164} {RNA1310_12163.1} {RNA815_4574}
15. MligTC455_23512 47 0.98 Mlig455_020753

Neo: -

Age: -

SLC38A9 1.73 - - - 0.966 - 0.764 Mlig455_020753 {REF} {Length: 3583} {TRANSSPLICED} {Human: ENSG00000177058, SLC38A9, solute carrier family 38 member 9, [Score=156, Expect=2e-43]} {Mouse: ENSMUSG00000047789, Slc38a9, solute carrier family 38, member 9, [Score=159, Expect=4e-44]} {Celegans: WBGene00008774, F13H10.3, Sodium-coupled neutral amino acid transporter 9 homolog, [Score=132, Expect=3e-34]} {Smed: dd_Smed_v6_23596_0_1, dd_Smed_v6_23596_0_1, [Score=116, Expect=7e-31]} {RNA1509_56368} {RNA1310_9681.1} {RNA815_10166}
16. MligTC455_32471 396 8.25 Mlig455_010246

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.797/0.02628

1.716 - - 0.744 0.972 - - Mlig455_010246 {REF} {Length: 1841} {RNA1509_19589, RNA1509_37340} {RNA1310_40610, RNA1509_19589, RNA1509_37340} {RNA1509_19589, RNA1509_37340, RNA815_19739}
17. MligTC455_52684 5630 117.29 Mlig455_001900

Neo: -

Age: -

PLAC8 1.677 - 0.725 - 0.952 - - Mlig455_001900 {REF} {Length: 806} {Pfam: PLAC8 family [PF04749.19, score=75.7]} {Human: ENSG00000145287, PLAC8, placenta specific 8, [Score=51.6, Expect=4e-09]} {Smed: dd_Smed_v6_1291_0_1, dd_Smed_v6_1291_0_1, [RH, Score=111, Expect=2e-33]} {RNA1509_11870, RNA1509_25827} {RNA1310_32231.1, RNA1509_11870} {RNA1509_11870, RNA815_23825}
18. MligTC455_26914 1138 23.71 Mlig455_061108

Neo: -

Age: logFC(26M/2M)=2.088

Region-enriched R3: 2.065/0.00064

1.67 - 0.711 - 0.959 - - Mlig455_061108 {REF} {Length: 2873} {Pfam: Fibronectin type III domain [PF00041.23, score=95.7]} {Mouse: ENSMUSG00000026193, Fn1, fibronectin 1, [Score=49.7, Expect=1e-05]} {RNA1509_23726, RNA1509_43838, RNA1509_45309, RNA1509_5914} {RNA1310_11509.1, RNA1509_23726, RNA1509_43838, RNA1509_45309, RNA1509_5914} {RNA1509_23726, RNA1509_43838, RNA1509_45309, RNA1509_5914, RNA815_4107}
19. MligTC455_50788 55 1.14 Mlig455_001945

Neo: -

Age: Down-Up-Up

Region-enriched R4: 4.857/0.00120
Region-enriched R5: 3.283/0.00685

GATA6 1.662 - - - 0.958 - 0.704 Mlig455_001945 {REF} {Length: 1855} {tRNA: Val(CAC),pseudo, score=26.6} {Pfam: GATA zinc finger [PF00320.29, score=52.2]; TFIIB zinc-binding [PF08271.14, score=20.7]} {Human: ENSG00000141448, GATA6, GATA binding protein 6, [Score=87.8, Expect=1e-18]; ENSG00000136574, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]; ENSG00000285109, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]} {Mouse: ENSMUSG00000005836, Gata6, GATA binding protein 6, [Score=87.0, Expect=2e-18]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [Score=85.5, Expect=4e-18]} {Dmel: FBgn0032223, GATAd, [RH, Score=87.0, Expect=1e-18]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_4075_0_1, dd_Smed_v6_4075_0_1, [Score=80.5, Expect=9e-17]} {RNA1509_47157} {RNA1310_45834} {RNA815_33962}
20. MligTC455_36696 1081 22.51 Mlig455_029781, Mlig455_029931

Neo: Irradiation

Age: -

Region-specific R5: 3.121

Region-enriched R5: 2.340/0.00000

NOTCH1 0.957 - - - 0.957 - -

Mlig455_029781 {REF} {Length: 5944} {Pfam: EGF-like domain [PF00008.29, score=196.5]; Ankyrin repeats (3 copies) [PF12796.9, score=151.2]; Human growth factor-like EGF [PF12661.9, score=101.4]; Ankyrin repeat [PF00023.32, score=79.2]; Ankyrin repeat [PF13606.8, score=73.4]; Ankyrin repeats (many copies) [PF13857.8, score=70.0]; Ankyrin repeats (many copies) [PF13637.8, score=66.1]; LNR domain [PF00066.19, score=63.4]; EGF-like domain [PF07974.15, score=53.4]; Calcium-binding EGF domain [PF07645.17, score=32.5]; Alliinase EGF-like domain [PF04863.15, score=23.6]; EGF domain [PF12947.9, score=19.7]} {Human: ENSG00000148400, NOTCH1, notch 1, [RH, Score=529, Expect=6e-156]; ENSG00000234876, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000223355, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000235396, NOTCH4, notch 4, [RH, Score=518, Expect=6e-154]; ENSG00000204301, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000232339, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000206312, NOTCH4, notch 4, [RH, Score=516, Expect=3e-153]; ENSG00000074181, NOTCH3, notch 3, [RH, Score=515, Expect=1e-151]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [RH, Score=526, Expect=2e-155]} {Dmel: FBgn0004647, N, Notch, [RH, Score=541, Expect=4e-160]} {Celegans: WBGene00001609, glp-1, [RH, Score=262, Expect=5e-71]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [RH, Score=386, Expect=2e-109]} {RNA1509_4917} {RNA1310_700} {RNA815_15747}

Mlig455_029931 {REF} {Length: 6142} {Pfam: EGF-like domain [PF00008.29, score=185.5]; Ankyrin repeats (3 copies) [PF12796.9, score=151.2]; Human growth factor-like EGF [PF12661.9, score=95.1]; Ankyrin repeat [PF00023.32, score=79.2]; Ankyrin repeat [PF13606.8, score=73.5]; Ankyrin repeats (many copies) [PF13857.8, score=70.1]; Ankyrin repeats (many copies) [PF13637.8, score=66.0]; EGF-like domain [PF07974.15, score=63.3]; LNR domain [PF00066.19, score=62.5]; Calcium-binding EGF domain [PF07645.17, score=32.8]; Alliinase EGF-like domain [PF04863.15, score=23.6]; EGF domain [PF12947.9, score=19.8]} {Human: ENSG00000148400, NOTCH1, notch 1, [RH, Score=527, Expect=2e-155]; ENSG00000234876, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000204301, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000223355, NOTCH4, notch 4, [RH, Score=520, Expect=3e-154]; ENSG00000232339, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000235396, NOTCH4, notch 4, [RH, Score=519, Expect=4e-154]; ENSG00000206312, NOTCH4, notch 4, [RH, Score=516, Expect=3e-153]; ENSG00000074181, NOTCH3, notch 3, [RH, Score=511, Expect=2e-150]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [RH, Score=546, Expect=5e-162]; ENSMUSG00000038146, Notch3, notch 3, [RH, Score=521, Expect=8e-154]} {Dmel: FBgn0004647, N, Notch, [RH, Score=588, Expect=3e-176]} {Celegans: WBGene00003001, lin-12, [RH, Score=282, Expect=4e-77]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=388, Expect=4e-110]} {RNA1509_4917} {RNA1310_700, RNA1509_4917} {RNA1509_4917, RNA815_15747}
21. MligTC455_40265 979 20.39 Mlig455_034790, Mlig455_034802

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.052/0.02175

GGACT 0.952 - - - 0.952 - -

Mlig455_034790 {REF} {Length: 1609} {TRANSSPLICED} {Pfam: Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=60.6]} {Human: ENSG00000134864, GGACT, gamma-glutamylamine cyclotransferase, [Score=95.5, Expect=1e-24]} {Mouse: ENSMUSG00000041625, Ggact, gamma-glutamylamine cyclotransferase, [RH, Score=97.4, Expect=1e-25]} {Dmel: FBgn0035083, Tina-1, Troponin C-akin-1, [Score=80.5, Expect=5e-19]} {Celegans: WBGene00023489, F42A10.9, [Score=86.3, Expect=2e-21]} {Smed: dd_Smed_v6_9866_0_1, dd_Smed_v6_9866_0_1, [Score=85.5, Expect=3e-21]} {RNA1509_8317} {RNA1310_19342} {RNA815_8745}

Mlig455_034802 {REF} {Length: 1780} {TRANSSPLICED} {Pfam: Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=60.6]} {Human: ENSG00000134864, GGACT, gamma-glutamylamine cyclotransferase, [Score=95.5, Expect=1e-24]} {Mouse: ENSMUSG00000041625, Ggact, gamma-glutamylamine cyclotransferase, [RH, Score=97.4, Expect=1e-25]} {Dmel: FBgn0035083, Tina-1, Troponin C-akin-1, [Score=80.5, Expect=5e-19]} {Celegans: WBGene00023489, F42A10.9, [Score=86.3, Expect=2e-21]} {Smed: dd_Smed_v6_9866_0_1, dd_Smed_v6_9866_0_1, [Score=85.9, Expect=3e-21]} {RNA1509_8317} {RNA1310_19342, RNA1509_8317} {RNA1509_8317, RNA815_8745}
22. MligTC455_23997 60 1.25 Mlig455_038741

Neo: -

Age: Up-Down-Up

0.95 - - - 0.950 - - Mlig455_038741 {REF} {Length: 894} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_49734} {RNA815_24463}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA