TomoSeq data search

Data search

Results for MligTC455_23628

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23628

317

6.61

Mlig455_002429

Neo: -

Age: -

Region-enriched R6: 2.359/0.01357

KLF1

Mlig455_002429 {REF} {Length: 1748} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=56.6]; Zinc-finger double domain [PF13465.8, score=44.1]; C2H2-type zinc finger [PF13894.8, score=37.0]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [RH, Score=159, Expect=5e-45]; ENSG00000102554, KLF5, Kruppel like factor 5, [RH, Score=158, Expect=1e-44]} {Mouse: ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [RH, Score=154, Expect=1e-42]; ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [RH, Score=151, Expect=4e-42]} {Dmel: FBgn0040765, luna, [RH, Score=143, Expect=5e-38]} {Celegans: WBGene00018990, klf-1, Kruppel-Like Factor (Zinc finger protein), [RH, Score=160, Expect=7e-45]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [RH, Score=136, Expect=2e-38]} {RNA1509_22585} {RNA1310_17974} {RNA815_6921.1}

Cumulative graph for MligTC455_23628

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.954	3.068	0.00916	0.28337
RegionR2	1.063	3.068	0.25815	0.63888
RegionR3	0.622	3.068	0.50853	0.99774
RegionR4	0.86	3.068	0.35121	0.67287
RegionR5	0.578	3.068	0.53152	0.89441
RegionR6	2.359	3.068	0.00022	0.01357
RegionR7	1.327	3.068	0.14532	0.70930
RegionR8	1.145	3.068	0.27581	0.90011

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.426	3.068	0.99997	1.00000
RegenerationR2	0.407	3.068	0.40999	0.82037
RegenerationR3	0.597	3.068	0.30267	0.73370
RegenerationR4	-0.196	3.068	0.73827	0.96716
RegenerationR5	0.643	3.068	0.23305	0.66659
RegenerationR6	-1.356	3.068	0.01393	0.14537
RegenerationBL	-2.393	3.068	0.00336	0.05041
RegenerationTP	-0.224	3.068	0.74312	1.00000

Genes with expression patterns similar to MligTC455_23628

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23628	317	6.61	Mlig455_002429	Neo: - Age: - Region-enriched R6: 2.359/0.01357	KLF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002429 {REF} {Length: 1748} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=56.6]; Zinc-finger double domain [PF13465.8, score=44.1]; C2H2-type zinc finger [PF13894.8, score=37.0]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [RH, Score=159, Expect=5e-45]; ENSG00000102554, KLF5, Kruppel like factor 5, [RH, Score=158, Expect=1e-44]} {Mouse: ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [RH, Score=154, Expect=1e-42]; ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [RH, Score=151, Expect=4e-42]} {Dmel: FBgn0040765, luna, [RH, Score=143, Expect=5e-38]} {Celegans: WBGene00018990, klf-1, Kruppel-Like Factor (Zinc finger protein), [RH, Score=160, Expect=7e-45]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [RH, Score=136, Expect=2e-38]} {RNA1509_22585} {RNA1310_17974} {RNA815_6921.1}
2.	MligTC455_38324	621	12.93	Mlig455_061532	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.278 Region-enriched R8: 2.153/0.00059 Regeneration-downregulated BL: -3.944 Regeneration-depleted BL: -3.944	NEFH	3.102	0.721	0.724	0.705	-	0.952	-	Mlig455_061532 {REF} {Length: 6211} {Pfam: Tau and MAP protein, tubulin-binding repeat [PF00418.21, score=79.2]} {Human: ENSG00000100285, NEFH, neurofilament heavy, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=72.0, Expect=2e-12]} {Dmel: FBgn0266579, tau, [Score=85.5, Expect=1e-17]} {Celegans: WBGene00004212, ptl-1, Microtubule-associated protein, [Score=81.6, Expect=1e-15]} {Smed: dd_Smed_v6_33588_0_1, dd_Smed_v6_33588_0_1, [Score=64.3, Expect=5e-12]} {RNA1509_27273} {RNA1310_5091} {RNA815_5806}
3.	MligTC455_21122	247	5.14	Mlig455_025099	Neo: - Age: -	SCAI	1.808	-	-	-	0.847	0.961	-	Mlig455_025099 {REF} {Length: 4572} {Pfam: Protein SCAI [PF12070.10, score=720.7]} {Human: ENSG00000173611, SCAI, suppressor of cancer cell invasion, [Score=359, Expect=8e-117]} {Mouse: ENSMUSG00000035236, Scai, suppressor of cancer cell invasion, [Score=357, Expect=4e-116]} {Dmel: FBgn0035677, CG13293, [RH, Score=647, Expect=0.0]} {Smed: dd_Smed_v6_13420_0_1, dd_Smed_v6_13420_0_1, [RH, Score=637, Expect=0.0]} {RNA1509_47392} {RNA1310_6699.1, RNA1509_47392} {RNA1509_47392, RNA815_18726}
4.	MligTC455_52252	1382	28.78	Mlig455_024739	Neo: - Age: logFC(26M/2M)=0.552 Region-enriched R7: 1.831/0.00005 Region-enriched R8: 1.551/0.03354	CD63	1.762	0.806	-	-	0.956	-	-	Mlig455_024739 {REF} {Length: 1912} {Pfam: Tetraspanin family [PF00335.22, score=139.2]} {Human: ENSG00000135404, CD63, CD63 molecule, [Score=84.7, Expect=8e-19]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=79.0, Expect=7e-17]; ENSMUSG00000027215, Cd82, CD82 antigen, [Score=78.2, Expect=2e-16]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=98.6, Expect=6e-24]} {Celegans: WBGene00006637, tsp-11, Tetraspanin, [RH, Score=75.5, Expect=1e-15]} {Smed: dd_Smed_v6_2698_0_1, dd_Smed_v6_2698_0_1, [RH, Score=159, Expect=3e-47]} {RNA1509_12441} {RNA1310_16211, RNA1509_12441} {RNA1509_12441, RNA815_7034.1}
5.	MligTC455_17393	345	7.18	Mlig455_019018, Mlig455_055685	Neo: - Age: -	ANKDD1A	1.698	-	0.744	-	-	0.954	-	Mlig455_019018 {REF} {Length: 2636} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=191.1]; Ankyrin repeats (many copies) [PF13637.8, score=165.7]; Ankyrin repeat [PF13606.8, score=151.2]; Ankyrin repeats (many copies) [PF13857.8, score=149.5]; Ankyrin repeat [PF00023.32, score=143.3]; Death domain [PF00531.24, score=29.5]} {Human: ENSG00000166839, ANKDD1A, ankyrin repeat and death domain containing 1A, [RH, Score=266, Expect=9e-82]} {Mouse: ENSMUSG00000066510, Ankdd1a, ankyrin repeat and death domain containing 1A, [RH, Score=273, Expect=2e-84]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=139, Expect=6e-34]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=131, Expect=1e-31]} {Smed: dd_Smed_v6_7532_0_1, dd_Smed_v6_7532_0_1, [RH, Score=464, Expect=2e-158]} {RNA1509_56207} {RNA1310_4362} {RNA815_20274} Mlig455_055685 {REF} {Length: 2672} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=191.4]; Ankyrin repeats (many copies) [PF13637.8, score=165.4]; Ankyrin repeat [PF13606.8, score=149.6]; Ankyrin repeats (many copies) [PF13857.8, score=148.6]; Ankyrin repeat [PF00023.32, score=142.4]; Death domain [PF00531.24, score=29.5]} {Human: ENSG00000166839, ANKDD1A, ankyrin repeat and death domain containing 1A, [RH, Score=267, Expect=7e-82]} {Mouse: ENSMUSG00000066510, Ankdd1a, ankyrin repeat and death domain containing 1A, [RH, Score=273, Expect=2e-84]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=137, Expect=1e-33]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=131, Expect=1e-31]} {Smed: dd_Smed_v6_7532_0_1, dd_Smed_v6_7532_0_1, [RH, Score=466, Expect=7e-159]} {RNA1509_56207} {RNA1310_4362, RNA1509_56207} {RNA1509_56207, RNA815_20274}
6.	MligTC455_42389	608	12.66	Mlig455_009287	Neo: - Age: - Region-enriched R2: 2.718/0.00370 Region-enriched R3: 2.286/0.01103		1.69	-	0.729	-	0.961	-	-	Mlig455_009287 {REF} {Length: 1730} {RNA1310_30650} {RNA815_7716.1}
7.	MligTC455_12174	71	1.48	Mlig455_070464	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_070464 {REF} {Length: 1031} {RNA1509_35809} {RNA1310_17376} {RNA815_12242.1}
8.	MligTC455_46605	388	8.08	Mlig455_032055	Neo: - Age: - Region-specific R2: 4.152		0.969	-	-	-	-	0.969	-	Mlig455_032055 {REF} {Length: 1416} {RNA1310_44339} {RNA815_20624}
9.	MligTC455_38419	298	6.22	Mlig455_055922	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_055922 {REF} {Length: 1428} {RNA1509_21831} {RNA1310_22461, RNA1509_21831} {RNA1509_21831, RNA815_11600}
10.	MligTC455_44910	1185	24.68	Mlig455_014380	Neo: - Age: Down-Up-Up		0.958	-	-	-	0.958	-	-	Mlig455_014380 {REF} {Length: 2014} {RNA1509_23540} {RNA1310_33807, RNA1509_23540} {RNA1509_23540, RNA815_16127}
11.	MligTC455_48409	252	5.25	Mlig455_000937	Neo: - Age: logFC(26M/2M)=-1.004		0.956	-	-	-	-	0.956	-	Mlig455_000937 {REF} {Length: 3906} {Pfam: Mab-21 protein [PF03281.16, score=40.8]} {RNA1509_23744, RNA1509_44882} {RNA1310_5050.1, RNA1509_23744, RNA1509_44882} {RNA1509_23744, RNA1509_44882, RNA815_9143}
12.	MligTC455_45008	629	13.1	Mlig455_016672	Neo: - Age: logFC(26M/2M)=-0.566 Region-enriched R7: 2.290/0.00017 Region-enriched R6: 1.566/0.02986		0.953	-	-	-	0.953	-	-	Mlig455_016672 {REF} {Length: 1196} {RNA1509_41773} {RNA1310_50243, RNA1509_41773} {RNA1509_41773, RNA815_30201}
13.	MligTC455_34060	623	12.99	Mlig455_032031	Neo: - Age: -	CYP2U1	0.952	-	-	-	-	0.952	-	Mlig455_032031 {REF} {Length: 2280} {Pfam: Cytochrome P450 [PF00067.24, score=317.2]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=230, Expect=2e-68]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=221, Expect=2e-65]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=246, Expect=3e-75]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=240, Expect=1e-72]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=235, Expect=5e-71]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=222, Expect=1e-65]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=207, Expect=2e-60]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=253, Expect=3e-78]} {RNA1509_16425, RNA1509_32217} {RNA1310_14742, RNA1509_16425, RNA1509_32217} {RNA1509_16425, RNA1509_32217, RNA815_5450}
14.	MligTC455_23584	574	11.95	Mlig455_050813	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.558	CCDC33	0.951	-	-	-	-	0.951	-	Mlig455_050813 {REF} {Length: 3399} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=24.3]; C-terminal membrane-localisation domain of ion-channel, VCN1 [PF16799.7, score=19.4]} {Human: ENSG00000140481, CCDC33, coiled-coil domain containing 33, [RH, Score=94.4, Expect=4e-19]} {Mouse: ENSMUSG00000037716, Ccdc33, coiled-coil domain containing 33, [Score=145, Expect=4e-35]} {Smed: dd_Smed_v6_15844_0_1, dd_Smed_v6_15844_0_1, [RH, Score=191, Expect=6e-50]} {RNA1509_7141} {RNA1310_15581.1} {RNA815_780.1}
15.	MligTC455_31476	251	5.24	Mlig455_027099	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_027099 {REF} {Length: 3261} {RNA1509_36736} {RNA1310_11727} {RNA815_8042}

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