M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_31476

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31476 251 5.24 Mlig455_027099

Neo: -

Age: -

 Mlig455_027099 {REF} {Length: 3261} {RNA1509_36736} {RNA1310_11727} {RNA815_8042}

Cumulative graph for MligTC455_31476

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.483 2.922 0.20592 0.84489
RegionR2 1.835 2.922 0.02060 0.15616
RegionR3 0.687 2.922 0.44902 0.96109
RegionR4 -0.529 2.922 0.96130 1.00000
RegionR5 1.151 2.922 0.12150 0.34966
RegionR6 0.329 2.922 0.70214 1.00000
RegionR7 0.871 2.922 0.42125 1.00000
RegionR8 1.14 2.922 0.36687 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.634 2.922 0.99993 1.00000
RegenerationR2 0.084 2.922 0.82052 0.99538
RegenerationR3 0.192 2.922 0.72062 0.95460
RegenerationR4 1.088 2.922 0.06892 0.41857
RegenerationR5 0.279 2.922 0.52672 0.87289
RegenerationR6 -0.216 2.922 0.73086 0.94133
RegenerationBL -0.34 2.922 0.65452 0.99030
RegenerationTP 0.185 2.922 0.81301 1.00000


Genes with expression patterns similar to MligTC455_31476

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31476 251 5.24 Mlig455_027099

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_027099 {REF} {Length: 3261} {RNA1509_36736} {RNA1310_11727} {RNA815_8042}
2. MligTC455_49593 323 6.72 Mlig455_025219

Neo: -

Age: Up-Down-Up

Region-enriched R2: 3.432/0.00265
Region-enriched R6: 2.411/0.04695

 RRBP1 2.514 - - 0.784 0.954 0.776 - Mlig455_025219 {REF} {Length: 1413} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [RH, Score=62.8, Expect=2e-11]} {RNA1509_39523} {RNA1310_52655} {RNA815_22785}
3. MligTC455_42973 126 2.63 Mlig455_049802

Neo: -

Age: -

Region-enriched R8: 3.350/0.01883

 PRR9 2.476 0.784 - 0.735 0.957 - - Mlig455_049802 {REF} {Length: 4186} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=48.1, Expect=2e-06]} {RNA1310_38620} {RNA815_23864}
4. MligTC455_52165 671 13.99 Mlig455_035531

Neo: -

Age: Down-Up-Up

Region-enriched R2: 5.972/0.00000
Region-enriched R3: 3.485/0.00346

 2.405 - - 0.725 0.964 0.716 - Mlig455_035531 {REF} {Length: 648} {RNA1509_42191} {RNA1310_75398, RNA1509_42191} {RNA1509_42191, RNA815_40298}
5. MligTC455_32582 524 10.91 Mlig455_010043

Neo: -

Age: -

 SH3GL1 1.83 - - - 0.950 0.880 - Mlig455_010043 {REF} {Length: 4371} {Pfam: BAR domain [PF03114.20, score=223.0]; SH3 domain [PF00018.30, score=50.0]; Variant SH3 domain [PF14604.8, score=49.3]; Bin/amphiphysin/Rvs domain for vesicular trafficking [PF10455.11, score=48.7]; Variant SH3 domain [PF07653.19, score=45.4]} {Human: ENSG00000141985, SH3GL1, SH3 domain containing GRB2 like 1, endophilin A2, [RH, Score=348, Expect=4e-118]; ENSG00000140600, SH3GL3, SH3 domain containing GRB2 like 3, endophilin A3, [RH, Score=339, Expect=8e-115]} {Mouse: ENSMUSG00000003200, Sh3gl1, SH3-domain GRB2-like 1, [RH, Score=344, Expect=2e-116]} {Dmel: FBgn0038659, EndoA, Endophilin A, [RH, Score=76.6, Expect=3e-15]} {Celegans: WBGene00006791, unc-57, Endophilin-A homolog, [RH, Score=328, Expect=3e-110]} {Smed: dd_Smed_v6_6372_0_1, dd_Smed_v6_6372_0_1, [RH, Score=391, Expect=2e-135]} {RNA1509_53264} {RNA1310_24751} {RNA815_11391.1}
6. MligTC455_13975 63 1.31 Mlig455_070810

Neo: -

Age: -

Region-enriched R2: 7.513/0.00519

 1.823 - - - 0.964 0.859 - Mlig455_070810 {REF} {Length: 1542} {Pfam: Otopetrin [PF03189.15, score=108.9]} {Dmel: FBgn0031514, CG3332, [Score=74.3, Expect=3e-14]} {Celegans: WBGene00015035, otpl-1, OToPetrin-Like, [Score=47.8, Expect=9e-06]} {Smed: dd_Smed_v6_13612_0_3, dd_Smed_v6_13612_0_3, [Score=119, Expect=2e-29]} {RNA1310_93602} {RNA815_48323}
7. MligTC455_18713 134 2.79 Mlig455_057934, Mlig455_057969

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.845

 1.817 - - - 0.963 0.854 -

Mlig455_057934 {REF} {Length: 1721} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=25.5]} {RNA1310_29499} {RNA815_28946}

Mlig455_057969 {REF} {Length: 1785} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=25.1]} {RNA1310_29499} {RNA815_28946}
8. MligTC455_49808 364 7.59 Mlig455_042595, Mlig455_042609, Mlig455_042640, Mlig455_042675

Neo: -

Age: -

Region-enriched R2: 2.482/0.00475

 ANGPT4 1.785 - - 0.816 0.969 - -

Mlig455_042595 {REF} {Length: 3876} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=88.6]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=102, Expect=3e-22]; ENSG00000154188, ANGPT1, angiopoietin 1, [Score=99.8, Expect=2e-21]} {Mouse: ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=99.0, Expect=2e-21]; ENSMUSG00000031465, Angpt2, angiopoietin 2, [Score=97.4, Expect=7e-21]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=97.4, Expect=6e-21]} {Dmel: FBgn0050280, CG30280, [Score=84.7, Expect=2e-18]} {RNA1509_43459} {RNA1310_3071} {RNA815_1352}

Mlig455_042609 {REF} {Length: 4453} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=186.1]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [RH, Score=165, Expect=6e-43]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [RH, Score=164, Expect=1e-42]; ENSG00000130812, ANGPTL6, angiopoietin like 6, [RH, Score=159, Expect=5e-41]; ENSG00000154188, ANGPT1, angiopoietin 1, [RH, Score=157, Expect=3e-40]} {Mouse: ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [RH, Score=168, Expect=2e-44]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [RH, Score=166, Expect=2e-43]} {Dmel: FBgn0050281, CG30281, [RH, Score=150, Expect=5e-40]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [RH, Score=169, Expect=1e-43]} {RNA1509_11466, RNA1509_43459} {RNA1310_3071, RNA1509_11466, RNA1509_43459} {RNA1509_11466, RNA1509_43459, RNA815_1352}

Mlig455_042640 {REF} {Length: 2691} {RNA1509_43459} {RNA1310_3071} {RNA815_1352}

Mlig455_042675 {REF} {Length: 3881} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=186.7]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [RH, Score=164, Expect=4e-43]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [RH, Score=162, Expect=2e-42]; ENSG00000130812, ANGPTL6, angiopoietin like 6, [RH, Score=158, Expect=5e-41]; ENSG00000154188, ANGPT1, angiopoietin 1, [RH, Score=157, Expect=2e-40]} {Mouse: ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [RH, Score=168, Expect=8e-45]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [RH, Score=166, Expect=1e-43]} {Dmel: FBgn0050281, CG30281, [RH, Score=149, Expect=5e-40]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [RH, Score=167, Expect=1e-43]} {RNA1509_43459} {RNA1310_3071} {RNA815_1352}
9. MligTC455_13612 95 1.98 Mlig455_060964

Neo: -

Age: -

 1.784 - - - 0.965 0.819 - Mlig455_060964 {REF} {Length: 2501} {Pfam: NPH3 family [PF03000.16, score=44.6]; BTB/POZ domain [PF00651.33, score=25.4]} {Smed: dd_Smed_v6_8081_0_1, dd_Smed_v6_8081_0_1, [Score=160, Expect=4e-42]} {RNA1310_11638} {RNA815_12936}
10. MligTC455_45191 1420 29.58 Mlig455_000192, Mlig455_058450, Mlig455_067701

Neo: -

Age: -

Regeneration-downregulated BL: -2.403

Regeneration-depleted BL: -2.403

 BSG 1.78 - - - 0.974 0.806 -

Mlig455_000192 {REF} {Length: 2540} {Pfam: Immunoglobulin domain [PF13927.8, score=57.1]; Immunoglobulin I-set domain [PF07679.18, score=53.6]; Immunoglobulin domain [PF00047.27, score=36.0]; Immunoglobulin domain [PF13895.8, score=30.4]; Immunoglobulin V-set domain [PF07686.19, score=22.2]} {Human: ENSG00000172270, BSG, basigin (Ok blood group), [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000023175, Bsg, basigin, [Score=82.4, Expect=3e-17]} {Dmel: FBgn0261822, Bsg, Basigin, [RH, Score=61.6, Expect=1e-10]} {Celegans: WBGene00004729, sax-3, [Score=57.4, Expect=6e-09]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=81.6, Expect=9e-18]} {RNA1509_31454, RNA1509_47270} {RNA1310_8812, RNA1509_31454, RNA1509_47270} {RNA1509_31454, RNA1509_47270, RNA815_2422}

Mlig455_058450 {REF} {Length: 3207} {Pfam: Immunoglobulin domain [PF13927.8, score=56.4]; Immunoglobulin I-set domain [PF07679.18, score=53.0]; Immunoglobulin domain [PF00047.27, score=36.1]; Immunoglobulin domain [PF13895.8, score=29.3]; Immunoglobulin V-set domain [PF07686.19, score=22.0]} {Human: ENSG00000172270, BSG, basigin (Ok blood group), [Score=67.4, Expect=2e-12]} {Mouse: ENSMUSG00000023175, Bsg, basigin, [Score=81.6, Expect=6e-17]} {Dmel: FBgn0261822, Bsg, Basigin, [RH, Score=62.4, Expect=6e-11]} {Celegans: WBGene00004729, sax-3, [Score=58.5, Expect=3e-09]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=80.5, Expect=3e-17]} {RNA1509_31454} {RNA1310_8812} {RNA815_2422}

Mlig455_067701 {REF} {Length: 2864} {Celegans: WBGene00018026, F35A5.4, [Score=60.1, Expect=8e-11]} {RNA1509_47270} {RNA1310_8812} {RNA815_2422}
11. MligTC455_10023 48 0.99 Mlig455_051817

Neo: -

Age: Down-Up-Down

 1.765 - - - 0.951 0.814 - Mlig455_051817 {REF} {Length: 3330} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=46.4]} {RNA1310_7348} {RNA815_14995}
12. MligTC455_43621 222 4.63 Mlig455_025703

Neo: -

Age: -

Region-enriched R4: 4.147/0.00000

 1.762 - - - 0.953 0.809 - Mlig455_025703 {REF} {Length: 2480} {RNA1509_50338} {RNA1310_25031} {RNA815_24211}
13. MligTC455_46604 383 7.97 Mlig455_040706, Mlig455_064575

Neo: -

Age: -

Region-enriched R2: 2.813/0.03742

 1.736 - - 0.774 0.962 - -

Mlig455_040706 {REF} {Length: 947} {Pfam: Domain of unknown function (DUF4695) [PF15766.7, score=39.5]} {Mouse: ENSMUSG00000087006, Gm13889, predicted gene 13889, [Score=44.7, Expect=1e-05]} {RNA1509_57682} {RNA1310_48869} {RNA815_41716}

Mlig455_064575 {REF} {Length: 1007} {Pfam: Domain of unknown function (DUF4695) [PF15766.7, score=39.1]} {RNA1509_57682} {RNA1310_48869} {RNA815_41716}
14. MligTC455_26439 277 5.77 Mlig455_013597

Neo: Irradiation

Age: Down-Up-Down

 1.725 - - - 0.959 0.766 - Mlig455_013597 {REF} {Length: 2976} {RNA1509_11549, RNA1509_27111} {RNA1310_13005, RNA1509_11549, RNA1509_27111} {RNA1509_11549, RNA1509_27111, RNA815_9058}
15. MligTC455_24028 4831 100.64 Mlig455_045099

Neo: -

Age: Down-Up-Up

Region-enriched R7: 4.473/0.00000
Region-enriched R8: 3.347/0.00002

Regeneration-downregulated BL: -5.638

Regeneration-depleted BL: -5.638

 1.709 - - - 0.953 0.756 - Mlig455_045099 {REF} {Length: 970} {Pfam: FMRFamide related peptide family [PF01581.18, score=27.3]} {Celegans: WBGene00001449, flp-6, FMRFamide-like neuropeptides 6 QQDSEVEREMM KSAYMRF-amide 1 KSAYMRF-amide 2 KSAYMRF-amide 3 KSAYMRF-amide 4 KSAYMRF-amide 5 KSAYMRF-amide 6, [Score=45.8, Expect=5e-06]} {Smed: dd_Smed_v6_1724_0_1, dd_Smed_v6_1724_0_1, [Score=43.5, Expect=5e-06]} {RNA1509_13084} {RNA1310_66177} {RNA815_9232.1}
16. MligTC455_35960 7399 154.16 Mlig455_026549, Mlig455_026639

Neo: -

Age: -

Region-enriched R2: 2.367/0.00000
Region-enriched R7: 1.504/0.00006

Regeneration-downregulated BL: -2.261

Regeneration-depleted BL: -2.261

 1.704 - - - 0.963 0.741 -

Mlig455_026549 {REF} {Length: 2670} {TRANSSPLICED} {RNA1509_22112, RNA1509_28335, RNA1509_42847} {RNA1310_15566.1, RNA1509_22112, RNA1509_28335, RNA1509_42847} {RNA1509_22112, RNA1509_28335, RNA1509_42847, RNA815_4401.1}

Mlig455_026639 {REF} {Length: 1560} {TRANSSPLICED} {RNA1509_13099, RNA1509_22074} {RNA1310_15566.1, RNA1509_13099, RNA1509_22074} {RNA1509_13099, RNA1509_22074, RNA815_4401.1}
17. MligTC455_24766 483 10.06 Mlig455_054542, Mlig455_055396

Neo: -

Age: -

 1.681 0.726 - - - - 0.955

Mlig455_054542 {REF} {Length: 1225} {NoTransDecoderORF} {RNA1509_54832} {RNA1310_53640.1} {RNA815_37039}

Mlig455_055396 {REF} {Length: 893} {NoTransDecoderORF} {RNA1509_54832} {RNA1310_53640.1, RNA1509_54832} {RNA1509_54832, RNA815_36040}
18. MligTC455_39718 298 6.22 Mlig455_008733, Mlig455_008735, Mlig455_008752

Neo: -

Age: -

 MPDZ 1.674 0.713 - - 0.961 - -

Mlig455_008733 {REF} {Length: 2941} {Pfam: PDZ domain [PF00595.26, score=188.4]; PDZ domain [PF13180.8, score=87.9]; PDZ domain [PF17820.3, score=86.4]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=247, Expect=7e-71]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=240, Expect=6e-68]} {Dmel: FBgn0263289, scrib, scribbled, [Score=85.9, Expect=4e-17]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=140, Expect=8e-36]} {Smed: dd_Smed_v6_4520_0_1, dd_Smed_v6_4520_0_1, [Score=147, Expect=2e-37]} {RNA1310_8275.3} {RNA815_16615}

Mlig455_008735 {REF} {Length: 636} {NoTransDecoderORF}

Mlig455_008752 {REF} {Length: 4051} {tRNA: Val(CAC),pseudo, score=28.4} {Pfam: PDZ domain [PF00595.26, score=161.5]; PDZ domain [PF13180.8, score=72.2]; PDZ domain [PF17820.3, score=72.1]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=191, Expect=2e-51]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=185, Expect=3e-49]} {Dmel: FBgn0263289, scrib, scribbled, [Score=72.4, Expect=7e-13]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=99.0, Expect=8e-22]} {Smed: dd_Smed_v6_4520_0_1, dd_Smed_v6_4520_0_1, [Score=127, Expect=1e-30]} {RNA1509_45595} {RNA1310_8275.3} {RNA815_16615}
19. MligTC455_47190 3794 79.04 Mlig455_044419, Mlig455_044420, Mlig455_044455

Neo: -

Age: -

Region-enriched R8: 3.373/0.00004
Region-enriched R7: 2.224/0.04308

 1.664 - - - 0.955 0.709 -

Mlig455_044419 {REF} {Length: 1036} {RNA1509_30179} {RNA1310_60147} {RNA815_30734}

Mlig455_044420 {REF} {Length: 1088} {RNA1509_30179} {RNA1310_60147} {RNA815_30734}

Mlig455_044455 {REF} {Length: 1883} {Smed: dd_Smed_v6_1588_0_1, dd_Smed_v6_1588_0_1, [Score=41.2, Expect=6e-06]} {RNA1509_30179} {RNA1310_60147, RNA1509_30179} {RNA1509_30179, RNA815_30734}
20. MligTC455_38656 100 2.08 Mlig455_021354

Neo: -

Age: -

 CPLX1 0.971 - - - 0.971 - - Mlig455_021354 {REF} {Length: 2078} {Pfam: Synaphin protein [PF05835.14, score=132.9]} {Human: ENSG00000168993, CPLX1, complexin 1, [Score=52.4, Expect=8e-09]; ENSG00000145920, CPLX2, complexin 2, [Score=50.8, Expect=1e-08]} {Mouse: ENSMUSG00000033615, Cplx1, complexin 1, [Score=53.5, Expect=2e-09]} {Dmel: FBgn0041605, cpx, complexin, [RH, Score=90.1, Expect=1e-23]} {Celegans: WBGene00022271, cpx-1, Putative complexin-1, [RH, Score=99.4, Expect=2e-27]} {Smed: dd_Smed_v6_9918_0_1, dd_Smed_v6_9918_0_1, [Score=94.4, Expect=2e-25]} {RNA1509_37151} {RNA1310_45759, RNA1509_37151} {RNA1509_37151, RNA815_22799}
21. MligTC455_22934 224 4.68 Mlig455_040954

Neo: -

Age: Up-Down-Up

 UBR2 0.957 - - - - - 0.957 Mlig455_040954 {REF} {Length: 5656} {TRANSSPLICED} {Pfam: Proteolysis_6 C-terminal [PF18995.2, score=103.6]; Putative zinc finger in N-recognin (UBR box) [PF02207.22, score=43.5]} {Human: ENSG00000024048, UBR2, ubiquitin protein ligase E3 component n-recognin 2, [Score=114, Expect=1e-24]} {Mouse: ENSMUSG00000023977, Ubr2, ubiquitin protein ligase E3 component n-recognin 2, [Score=122, Expect=3e-27]} {Dmel: FBgn0030809, Ubr1, Ubr1 ubiquitin ligase, [Score=71.6, Expect=6e-12]} {RNA1509_10726} {RNA1310_4421, RNA1509_10726} {RNA1509_10726, RNA815_27960}
22. MligTC455_32810 1118 23.3 Mlig455_053373

Neo: -

Age: -

 WLS 0.956 - - - - - 0.956 Mlig455_053373 {REF} {Length: 3703} {TRANSSPLICED} {Pfam: Wnt-binding factor required for Wnt secretion [PF06664.14, score=249.2]} {Human: ENSG00000116729, WLS, wntless Wnt ligand secretion mediator, [RH, Score=404, Expect=4e-134]} {Mouse: ENSMUSG00000028173, Wls, wntless WNT ligand secretion mediator, [RH, Score=396, Expect=2e-131]} {Dmel: FBgn0036141, wls, wntless, [RH, Score=400, Expect=9e-133]} {Celegans: WBGene00003246, mig-14, Protein wntless homolog, [RH, Score=309, Expect=6e-98]} {Smed: dd_Smed_v6_9546_0_1, dd_Smed_v6_9546_0_1, [RH, Score=325, Expect=1e-105]} {RNA1509_11679, RNA1509_47528} {RNA1310_8508, RNA1509_11679, RNA1509_47528} {RNA1509_11679, RNA1509_47528, RNA815_6300}
23. MligTC455_41644 1214 25.28 Mlig455_036599, Mlig455_057748, Mlig455_057750

Neo: -

Age: -

Region-specific R2: 4.114

Region-enriched R2: 2.969/0.00052

Regeneration-downregulated BL: -8.163

Regeneration-depleted BL: -8.163

 0.956 - - - 0.956 - -

Mlig455_036599 {REF} {Length: 673} {RNA1509_43529} {RNA1310_60851, RNA1509_43529} {RNA1509_43529, RNA815_37406}

Mlig455_057748 {REF} {Length: 702} {RNA1509_43529} {RNA1310_60851} {RNA815_37406}

Mlig455_057750 {REF} {Length: 401} {RNA1509_43529} {RNA1310_60851} {RNA815_37406}
24. MligTC455_49854 18 0.37 Mlig455_020520

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.687

 0.956 - - - 0.956 - - Mlig455_020520 {REF} {Length: 1291} {TRANSSPLICED} {RNA1509_44515} {RNA1310_26152} {RNA815_8882}
25. MligTC455_40653 608 12.66 Mlig455_001674

Neo: -

Age: -

Region-enriched R2: 1.468/0.01853

 0.955 - - - 0.955 - - Mlig455_001674 {REF} {Length: 2361} {TRANSSPLICED} {Pfam: Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=51.2]; Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=48.0]} {Smed: dd_Smed_v6_8715_0_1, dd_Smed_v6_8715_0_1, [Score=50.8, Expect=1e-06]} {RNA1509_19981, RNA1509_43006} {RNA1310_9812, RNA1509_19981, RNA1509_43006} {RNA1509_19981, RNA1509_43006, RNA815_12879}
26. MligTC455_42367 130 2.71 Mlig455_042775

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_042775 {REF} {Length: 2936} {RNA1509_36917} {RNA1310_11029.2} {RNA815_9526}
27. MligTC455_29797 2469 51.44 Mlig455_011428

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.328

Region-enriched R2: 5.791/0.00000
Region-enriched R3: 3.237/0.00612

 0.954 - - - 0.954 - - Mlig455_011428 {REF} {Length: 902} {RNA1509_21417, RNA1509_23190, RNA1509_31800, RNA1509_3881, RNA1509_41776, RNA1509_43586} {RNA1310_44752, RNA1509_21417, RNA1509_23190, RNA1509_31800, RNA1509_3881, RNA1509_41776, RNA1509_43586} {RNA1509_21417, RNA1509_23190, RNA1509_31800, RNA1509_3881, RNA1509_41776, RNA1509_43586, RNA815_21540}
28. MligTC455_52646 1059 22.07 Mlig455_035837

Neo: -

Age: -

Region-enriched R2: 1.308/0.00778

 FBXL13 0.954 - - - - 0.954 - Mlig455_035837 {REF} {Length: 2683} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=92.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=69.2]; Leucine rich repeat [PF13855.8, score=34.6]; F-box-like [PF12937.9, score=21.2]; F-box domain [PF00646.35, score=19.5]} {Human: ENSG00000161040, FBXL13, F-box and leucine rich repeat protein 13, [RH, Score=370, Expect=3e-116]} {Mouse: ENSMUSG00000048520, Fbxl13, F-box and leucine-rich repeat protein 13, [RH, Score=367, Expect=1e-114]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=104, Expect=1e-22]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=122, Expect=2e-29]} {Smed: dd_Smed_v6_14890_0_1, dd_Smed_v6_14890_0_1, [RH, Score=597, Expect=0.0]} {RNA1509_11787, RNA1509_47513} {RNA1310_7673, RNA1509_11787, RNA1509_47513} {RNA1509_11787, RNA1509_47513, RNA815_2345.1}
29. MligTC455_18504 85 1.78 Mlig455_015015, Mlig455_038638

Neo: -

Age: -

 0.953 - - - 0.953 - -

Mlig455_015015 {REF} {Length: 1382} {NoTransDecoderORF} {RNA1509_10728} {RNA1310_102527} {RNA815_20199}

Mlig455_038638 {REF} {Length: 3970} {RNA1509_10728} {RNA1310_102527} {RNA815_58474}
30. MligTC455_45731 76 1.59 Mlig455_003947, Mlig455_003964, Mlig455_005981

Neo: -

Age: Up-Down-Down

 TTLL7 0.953 - - - 0.953 - -

Mlig455_003947 {REF} {Length: 4060} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=212.9]; Sugar-transfer associated ATP-grasp [PF14397.8, score=23.9]; YheC/D like ATP-grasp [PF14398.8, score=21.3]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=351, Expect=4e-107]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=347, Expect=1e-103]} {Dmel: FBgn0039501, CG5987, [Score=235, Expect=3e-65]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=158, Expect=4e-40]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=313, Expect=3e-91]} {RNA1310_17573} {RNA815_57268}

Mlig455_003964 {REF} {Length: 3783} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=213.2]; Sugar-transfer associated ATP-grasp [PF14397.8, score=23.9]; YheC/D like ATP-grasp [PF14398.8, score=21.3]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=353, Expect=2e-109]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=349, Expect=2e-104]} {Dmel: FBgn0039501, CG5987, [Score=234, Expect=4e-65]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=157, Expect=7e-40]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=312, Expect=4e-91]} {RNA1310_17573} {RNA815_57268}

Mlig455_005981 {REF} {Length: 4222} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=213.3]; Sugar-transfer associated ATP-grasp [PF14397.8, score=23.7]; YheC/D like ATP-grasp [PF14398.8, score=21.1]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=353, Expect=2e-107]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=349, Expect=9e-104]} {Dmel: FBgn0039501, CG5987, [Score=235, Expect=5e-65]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=157, Expect=9e-40]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=314, Expect=3e-91]} {RNA1310_17573} {RNA815_57268}
31. MligTC455_34060 623 12.99 Mlig455_032031

Neo: -

Age: -

 CYP2U1 0.952 - - - - 0.952 - Mlig455_032031 {REF} {Length: 2280} {Pfam: Cytochrome P450 [PF00067.24, score=317.2]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=230, Expect=2e-68]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=221, Expect=2e-65]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=246, Expect=3e-75]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=240, Expect=1e-72]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=235, Expect=5e-71]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=222, Expect=1e-65]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=207, Expect=2e-60]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=253, Expect=3e-78]} {RNA1509_16425, RNA1509_32217} {RNA1310_14742, RNA1509_16425, RNA1509_32217} {RNA1509_16425, RNA1509_32217, RNA815_5450}
32. MligTC455_14866 263 5.48 Mlig455_043773, Mlig455_043784, Mlig455_043795, Mlig455_047451

Neo: -

Age: Down-Up-Down

 0.951 - - - 0.951 - -

Mlig455_043773 {REF} {Length: 1029} {RNA1310_9977} {RNA815_40275}

Mlig455_043784 {REF} {Length: 1074} {RNA1310_9977} {RNA815_40275}

Mlig455_043795 {REF} {Length: 1171} {RNA1310_9977} {RNA815_40275}

Mlig455_047451 {REF} {Length: 433} {NoTransDecoderORF} {RNA1310_9977} {RNA815_40275}
33. MligTC455_23628 317 6.61 Mlig455_002429

Neo: -

Age: -

Region-enriched R6: 2.359/0.01357

 KLF1 0.951 - - - - 0.951 - Mlig455_002429 {REF} {Length: 1748} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=56.6]; Zinc-finger double domain [PF13465.8, score=44.1]; C2H2-type zinc finger [PF13894.8, score=37.0]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [RH, Score=159, Expect=5e-45]; ENSG00000102554, KLF5, Kruppel like factor 5, [RH, Score=158, Expect=1e-44]} {Mouse: ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [RH, Score=154, Expect=1e-42]; ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [RH, Score=151, Expect=4e-42]} {Dmel: FBgn0040765, luna, [RH, Score=143, Expect=5e-38]} {Celegans: WBGene00018990, klf-1, Kruppel-Like Factor (Zinc finger protein), [RH, Score=160, Expect=7e-45]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [RH, Score=136, Expect=2e-38]} {RNA1509_22585} {RNA1310_17974} {RNA815_6921.1}
34. MligTC455_49252 89 1.85 Mlig455_062278

Neo: -

Age: logFC(26M/2M)=0.298

 FOLR2 0.951 - - - - - 0.951 Mlig455_062278 {REF} {Length: 3000} {TRANSSPLICED} {Pfam: Folate receptor family [PF03024.16, score=126.0]} {Human: ENSG00000165457, FOLR2, folate receptor beta, [RH, Score=126, Expect=2e-34]; ENSG00000110203, FOLR3, folate receptor 3, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000032725, Folr2, folate receptor 2 (fetal), [RH, Score=124, Expect=1e-33]; ENSMUSG00000001827, Folr1, folate receptor 1 (adult), [RH, Score=120, Expect=2e-32]} {Smed: dd_Smed_v6_8103_0_1, dd_Smed_v6_8103_0_1, [RH, Score=155, Expect=3e-46]} {RNA1509_17845, RNA1509_23353, RNA1509_24248} {RNA1310_17821, RNA1509_17845, RNA1509_24248} {RNA1509_17845, RNA1509_24248, RNA815_16281}
35. MligTC455_49594 855 17.81 Mlig455_025640

Neo: -

Age: -

Region-enriched R6: 2.500/0.02265

Regeneration-downregulated BL: -3.434

Regeneration-depleted BL: -3.434

 RRBP1 0.951 - - - 0.951 - - Mlig455_025640 {REF} {Length: 981} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [Score=57.4, Expect=9e-10]} {RNA1509_37278} {RNA1310_48523} {RNA815_22785}
36. MligTC455_17939 356 7.42 Mlig455_054863

Neo: -

Age: -

 0.95 - - - 0.950 - - Mlig455_054863 {REF} {Length: 1348} {RNA1509_43169} {RNA1310_59275} {RNA815_30847}
37. MligTC455_28744 162 3.37 Mlig455_011019

Neo: -

Age: Down-Up-Down

 ITPR1 0.95 - - - 0.950 - - Mlig455_011019 {REF} {Length: 3051} {Pfam: Ion transport protein [PF00520.33, score=20.4]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=116, Expect=1e-26]} {Mouse: ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=114, Expect=7e-26]; ENSMUSG00000030592, Ryr1, ryanodine receptor 1, skeletal muscle, [Score=109, Expect=2e-24]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=97.4, Expect=9e-21]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=111, Expect=2e-25]} {Smed: dd_Smed_v6_3814_1_2, dd_Smed_v6_3814_1_2, [Score=447, Expect=6e-150]} {RNA1509_25537} {RNA1310_434.1} {RNA815_10022}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA