TomoSeq data search

Data search

Results for MligTC455_23656

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23656

7788

162.26

Mlig455_009502

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.381

Region-enriched R4: 1.254/0.00004

UQCRH

Mlig455_009502 {REF} {Length: 605} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=83.6]} {Human: ENSG00000173660, UQCRH, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=68.6, Expect=2e-16]} {Mouse: ENSMUSG00000063882, Uqcrh, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=71.2, Expect=1e-17]} {Dmel: FBgn0050354, UQCR-11L, Ubiquinol-cytochrome c reductase 11 kDa subunit-like, [RH, Score=66.6, Expect=4e-16]} {Smed: dd_Smed_v6_277_0_1, dd_Smed_v6_277_0_1, [RH, Score=78.2, Expect=5e-21]} {RNA1509_17996, RNA1509_22553} {RNA1310_57613.2, RNA1509_17996, RNA1509_22553} {RNA1509_17996, RNA1509_22553, RNA815_25656}

Cumulative graph for MligTC455_23656

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.302	7.46	0.45618	1.00000
RegionR2	-0.659	7.46	0.01895	0.14805
RegionR3	0.265	7.46	0.25889	0.80263
RegionR4	1.254	7.46	0.00000	0.00004
RegionR5	0.465	7.46	0.03883	0.15616
RegionR6	0.239	7.46	0.30758	0.89833
RegionR7	-0.505	7.46	0.05169	0.43766
RegionR8	-0.758	7.46	0.01234	0.21306

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.563	7.46	0.28780	0.98638
RegenerationR2	-0.181	7.46	0.54024	0.88821
RegenerationR3	-0.349	7.46	0.24702	0.68112
RegenerationR4	-0.386	7.46	0.21228	0.65986
RegenerationR5	-0.124	7.46	0.67784	0.94359
RegenerationR6	-0.277	7.46	0.35961	0.70412
RegenerationBL	0.177	7.46	0.52170	0.88303
RegenerationTP	0.167	7.46	0.58927	0.95484

Genes with expression patterns similar to MligTC455_23656

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23656	7788	162.26	Mlig455_009502	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.381 Region-enriched R4: 1.254/0.00004	UQCRH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009502 {REF} {Length: 605} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=83.6]} {Human: ENSG00000173660, UQCRH, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=68.6, Expect=2e-16]} {Mouse: ENSMUSG00000063882, Uqcrh, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=71.2, Expect=1e-17]} {Dmel: FBgn0050354, UQCR-11L, Ubiquinol-cytochrome c reductase 11 kDa subunit-like, [RH, Score=66.6, Expect=4e-16]} {Smed: dd_Smed_v6_277_0_1, dd_Smed_v6_277_0_1, [RH, Score=78.2, Expect=5e-21]} {RNA1509_17996, RNA1509_22553} {RNA1310_57613.2, RNA1509_17996, RNA1509_22553} {RNA1509_17996, RNA1509_22553, RNA815_25656}
2.	MligTC455_23657	7841	163.36	Mlig455_070927	Neo: Int S/G2/M Age: - Region-enriched R4: 1.292/0.00001	UQCRH	5.983	0.999	0.999	0.996	0.996	0.998	0.995	Mlig455_070927 {REF} {Length: 585} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=83.0]} {Human: ENSG00000173660, UQCRH, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=68.6, Expect=2e-16]} {Mouse: ENSMUSG00000063882, Uqcrh, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=70.9, Expect=1e-17]} {Dmel: FBgn0050354, UQCR-11L, Ubiquinol-cytochrome c reductase 11 kDa subunit-like, [RH, Score=65.9, Expect=9e-16]} {Smed: dd_Smed_v6_277_0_1, dd_Smed_v6_277_0_1, [RH, Score=78.2, Expect=5e-21]} {RNA1509_1098, RNA1509_17996, RNA1509_40177, RNA1509_53729, RNA1509_9709} {RNA1310_22441.2, RNA1509_1098, RNA1509_40177, RNA1509_53729, RNA1509_9709} {RNA1509_1098, RNA1509_40177, RNA1509_53729, RNA1509_9709, RNA815_25656}
3.	MligTC455_51987	9943	207.14	Mlig455_051775	Neo: - Age: - Region-enriched R4: 1.364/0.00000	UQCRB	3.291	0.826	0.700	-	0.978	-	0.787	Mlig455_051775 {REF} {Length: 888} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase complex 14kD subunit [PF02271.18, score=66.8]} {Human: ENSG00000156467, UQCRB, ubiquinol-cytochrome c reductase binding protein, [RH, Score=47.4, Expect=3e-07]} {Mouse: ENSMUSG00000021520, Uqcrb, ubiquinol-cytochrome c reductase binding protein, [RH, Score=50.8, Expect=1e-08]} {Dmel: FBgn0039576, UQCR-14L, Ubiquinol-cytochrome c reductase 14 kDa subunit-like, [RH, Score=43.9, Expect=2e-06]} {Smed: dd_Smed_v6_1442_0_1, dd_Smed_v6_1442_0_1, [RH, Score=48.9, Expect=3e-08]} {RNA1509_16736, RNA1509_26440, RNA1509_3352} {RNA1310_28280, RNA1509_16736, RNA1509_26440, RNA1509_3352} {RNA1509_16736, RNA1509_26440, RNA1509_3352, RNA815_15959.1}
4.	MligTC455_51986	9652	201.08	Mlig455_026760	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.222 Region-enriched R4: 1.452/0.00000	UQCRB	2.61	0.826	-	-	0.964	-	0.820	Mlig455_026760 {REF} {Length: 1767} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase complex 14kD subunit [PF02271.18, score=66.8]} {Human: ENSG00000156467, UQCRB, ubiquinol-cytochrome c reductase binding protein, [RH, Score=47.4, Expect=3e-07]} {Mouse: ENSMUSG00000021520, Uqcrb, ubiquinol-cytochrome c reductase binding protein, [RH, Score=50.8, Expect=1e-08]} {Dmel: FBgn0039576, UQCR-14L, Ubiquinol-cytochrome c reductase 14 kDa subunit-like, [RH, Score=43.9, Expect=2e-06]} {Smed: dd_Smed_v6_1442_0_1, dd_Smed_v6_1442_0_1, [RH, Score=48.9, Expect=3e-08]} {RNA1509_19006, RNA1509_3047, RNA1509_745} {RNA1310_28280, RNA1509_19006, RNA1509_3047, RNA1509_745} {RNA1509_19006, RNA1509_3047, RNA1509_745, RNA815_15959.1}
5.	MligTC455_32945	12798	266.61	Mlig455_027042	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.206 Region-enriched R4: 1.051/0.00081		2.463	-	-	-	0.735	0.954	0.774	Mlig455_027042 {REF} {Length: 1262} {TRANSSPLICED} {Pfam: Mitochondrial F1F0-ATP synthase, subunit f [PF10206.11, score=107.4]} {Dmel: FBgn0035032, ATPsynF, ATP synthase, subunit F, [RH, Score=77.8, Expect=1e-19]} {Celegans: WBGene00011273, R53.4, Putative ATP synthase subunit f, mitochondrial, [RH, Score=54.7, Expect=2e-10]} {Smed: dd_Smed_v6_776_0_1, dd_Smed_v6_776_0_1, [RH, Score=72.4, Expect=1e-17]} {RNA1509_40782, RNA1509_55624, RNA1509_725, RNA1509_9345} {RNA1310_27098, RNA1509_40782, RNA1509_55624, RNA1509_725, RNA1509_9345} {RNA1509_40782, RNA1509_55624, RNA1509_725, RNA1509_9345, RNA815_11619}
6.	MligTC455_32715	7927	165.14	Mlig455_048846	Neo: Int S/G2/M Age: -		1.858	-	-	-	-	0.897	0.961	Mlig455_048846 {REF} {Length: 542} {TRANSSPLICED} {Pfam: ATP synthase regulation [PF14960.8, score=54.0]} {RNA1509_795} {RNA1310_52206.1, RNA1509_795} {RNA1509_795, RNA815_26551.1}
7.	MligTC455_15910	6253	130.27	Mlig455_046455	Neo: Int S/G2/M Age: -	RPS17	1.786	-	-	-	0.968	-	0.818	Mlig455_046455 {REF} {Length: 583} {TRANSSPLICED} {Pfam: Ribosomal S17 [PF00833.20, score=200.5]} {Human: ENSG00000182774, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]; ENSG00000278229, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]} {Mouse: ENSMUSG00000061787, Rps17, ribosomal protein S17, [RH, Score=199, Expect=5e-67]} {Dmel: FBgn0005533, RpS17, Ribosomal protein S17, [RH, Score=170, Expect=1e-55]} {Celegans: WBGene00004486, rps-17, 40S ribosomal protein S17, [RH, Score=171, Expect=2e-56]} {Smed: dd_Smed_v6_195_0_1, dd_Smed_v6_195_0_1, [RH, Score=171, Expect=3e-56]} {RNA1509_1256, RNA1509_1542} {RNA1310_57463, RNA1509_1542} {RNA1509_1542, RNA815_12035.3}
8.	MligTC455_45400	7092	147.75	Mlig455_045301	Neo: - Age: - Region-enriched R4: 1.238/0.00025	ATP5MC2	1.671	-	-	-	0.711	-	0.960	Mlig455_045301 {REF} {Length: 761} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=42.4]} {Human: ENSG00000135390, ATP5MC2, ATP synthase membrane subunit c locus 2, [RH, Score=149, Expect=6e-47]; ENSG00000154518, ATP5MC3, ATP synthase membrane subunit c locus 3, [RH, Score=147, Expect=3e-46]; ENSG00000159199, ATP5MC1, ATP synthase membrane subunit c locus 1, [RH, Score=144, Expect=1e-45]} {Mouse: ENSMUSG00000062683, Atp5g2, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9), [RH, Score=148, Expect=1e-46]; ENSMUSG00000006057, Atp5g1, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9), [RH, Score=145, Expect=8e-46]; ENSMUSG00000018770, Atp5g3, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9), [RH, Score=144, Expect=3e-45]} {Dmel: FBgn0039830, ATPsynC, ATP synthase, subunit C, [RH, Score=147, Expect=6e-47]} {Celegans: WBGene00022336, Y82E9BR.3, ATP synthase lipid-binding protein, mitochondrial, [RH, Score=147, Expect=3e-47]} {Smed: dd_Smed_v6_401_0_1, dd_Smed_v6_401_0_1, [RH, Score=116, Expect=5e-35]} {RNA1509_19007, RNA1509_5062, RNA1509_9141, RNA1509_9927} {RNA1310_47172, RNA1509_19007, RNA1509_5062, RNA1509_9141, RNA1509_9927} {RNA1509_19007, RNA1509_5062, RNA1509_9141, RNA1509_9927, RNA815_24420}
9.	MligTC455_22829	22696	472.84	Mlig455_017875	Neo: Int S/G2/M Age: -	RPL9	0.974	-	-	-	-	0.974	-	Mlig455_017875 {REF} {Length: 710} {TRANSSPLICED} {Pfam: Ribosomal protein L6 [PF00347.25, score=114.5]} {Human: ENSG00000163682, RPL9, ribosomal protein L9, [RH, Score=217, Expect=4e-72]} {Mouse: ENSMUSG00000047215, Rpl9, ribosomal protein L9, [RH, Score=218, Expect=2e-72]; ENSMUSG00000062456, Rpl9-ps6, ribosomal protein L9, pseudogene 6, [RH, Score=216, Expect=7e-72]} {Dmel: FBgn0015756, RpL9, Ribosomal protein L9, [RH, Score=231, Expect=9e-78]} {Celegans: WBGene00004420, rpl-9, 60S ribosomal protein L9, [RH, Score=216, Expect=3e-72]} {Smed: dd_Smed_v6_150_0_1, dd_Smed_v6_150_0_1, [RH, Score=235, Expect=1e-79]} {RNA1509_57874} {RNA1310_52091.1, RNA1509_57874} {RNA1509_57874, RNA815_22948}
10.	MligTC455_03533	1245	25.93	Mlig455_068408	Neo: - Age: -	HMCN2	0.957	-	-	-	0.957	-	-	Mlig455_068408 {REF} {Length: 2467} {Pfam: Immunoglobulin domain [PF13927.8, score=98.3]; Immunoglobulin I-set domain [PF07679.18, score=73.4]; Immunoglobulin domain [PF00047.27, score=61.0]; Immunoglobulin domain [PF13895.8, score=59.7]; Immunoglobulin V-set domain [PF07686.19, score=51.1]; Immunoglobulin domain [PF18452.3, score=22.0]; CD47 immunoglobulin-like domain [PF08204.13, score=18.7]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=70.5, Expect=2e-12]; ENSG00000146555, SDK1, sidekick cell adhesion molecule 1, [Score=68.9, Expect=7e-12]; ENSG00000160867, FGFR4, fibroblast growth factor receptor 4, [Score=68.9, Expect=5e-12]; ENSG00000143341, HMCN1, hemicentin 1, [Score=67.8, Expect=2e-11]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=73.2, Expect=2e-13]} {Dmel: FBgn0052791, DIP-alpha, Dpr-interacting protein alpha, [RH, Score=84.7, Expect=2e-17]} {Celegans: WBGene00004372, rig-5, NeuRonal IGCAM, [Score=68.2, Expect=3e-12]} {Smed: dd_Smed_v6_3768_0_1, dd_Smed_v6_3768_0_1, [RH, Score=169, Expect=7e-49]} {RNA1509_2740, RNA1509_31253, RNA1509_45147} {RNA1310_22774.1, RNA1509_2740, RNA1509_31253, RNA1509_45147} {RNA1509_2740, RNA1509_31253, RNA1509_45147, RNA815_4345.1}
11.	MligTC455_29659	1489	31.02	Mlig455_013594	Neo: - Age: logFC(26M/2M)=0.174 Regeneration-upregulated BL: 1.658 Regeneration-enriched BL: 1.658	UGP2	0.953	-	-	-	0.953	-	-	Mlig455_013594 {REF} {Length: 2365} {TRANSSPLICED} {Pfam: UTP--glucose-1-phosphate uridylyltransferase [PF01704.20, score=614.7]} {Human: ENSG00000169764, UGP2, UDP-glucose pyrophosphorylase 2, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000001891, Ugp2, UDP-glucose pyrophosphorylase 2, [RH, Score=634, Expect=0.0]} {Dmel: FBgn0035978, UGP, [RH, Score=622, Expect=0.0]} {Celegans: WBGene00010665, K08E3.5, [RH, Score=621, Expect=0.0]} {Smed: dd_Smed_v6_3057_0_1, dd_Smed_v6_3057_0_1, [RH, Score=621, Expect=0.0]} {RNA1509_1617, RNA1509_16972, RNA1509_22084, RNA1509_34358, RNA1509_34975} {RNA1310_6161.1, RNA1509_16972, RNA1509_22084, RNA1509_34358, RNA1509_34975} {RNA1509_16972, RNA1509_22084, RNA1509_34358, RNA1509_34975, RNA815_2096.1}
12.	MligTC455_43624	1999	41.64	Mlig455_049963	Neo: - Age: Down-Up-Up		0.952	-	-	-	0.952	-	-	Mlig455_049963 {REF} {Length: 1116} {TRANSSPLICED} {Pfam: Apolipoprotein O [PF09769.11, score=32.7]} {RNA1509_23798, RNA1509_53658, RNA1509_58210} {RNA1310_18236.2, RNA1509_53658, RNA1509_58210} {RNA1509_53658, RNA1509_58210, RNA815_11585}

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