TomoSeq data search

Data search

Results for MligTC455_23657

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23657

7841

163.36

Mlig455_070927

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.292/0.00001

UQCRH

Mlig455_070927 {REF} {Length: 585} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=83.0]} {Human: ENSG00000173660, UQCRH, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=68.6, Expect=2e-16]} {Mouse: ENSMUSG00000063882, Uqcrh, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=70.9, Expect=1e-17]} {Dmel: FBgn0050354, UQCR-11L, Ubiquinol-cytochrome c reductase 11 kDa subunit-like, [RH, Score=65.9, Expect=9e-16]} {Smed: dd_Smed_v6_277_0_1, dd_Smed_v6_277_0_1, [RH, Score=78.2, Expect=5e-21]} {RNA1509_1098, RNA1509_17996, RNA1509_40177, RNA1509_53729, RNA1509_9709} {RNA1310_22441.2, RNA1509_1098, RNA1509_40177, RNA1509_53729, RNA1509_9709} {RNA1509_1098, RNA1509_40177, RNA1509_53729, RNA1509_9709, RNA815_25656}

Cumulative graph for MligTC455_23657

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.299	7.469	0.45553	1.00000
RegionR2	-0.664	7.469	0.01559	0.13213
RegionR3	0.243	7.469	0.28873	0.83154
RegionR4	1.292	7.469	0.00000	0.00001
RegionR5	0.482	7.469	0.02792	0.12304
RegionR6	0.238	7.469	0.29960	0.89092
RegionR7	-0.514	7.469	0.04321	0.39990
RegionR8	-0.78	7.469	0.00891	0.17628

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.558	7.469	0.28750	0.98608
RegenerationR2	-0.162	7.469	0.57342	0.90366
RegenerationR3	-0.306	7.469	0.29830	0.72971
RegenerationR4	-0.405	7.469	0.17896	0.61844
RegenerationR5	-0.166	7.469	0.56694	0.89506
RegenerationR6	-0.25	7.469	0.39618	0.73461
RegenerationBL	0.19	7.469	0.48109	0.84610
RegenerationTP	0.155	7.469	0.61019	0.96673

Genes with expression patterns similar to MligTC455_23657

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23657	7841	163.36	Mlig455_070927	Neo: Int S/G2/M Age: - Region-enriched R4: 1.292/0.00001	UQCRH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_070927 {REF} {Length: 585} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=83.0]} {Human: ENSG00000173660, UQCRH, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=68.6, Expect=2e-16]} {Mouse: ENSMUSG00000063882, Uqcrh, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=70.9, Expect=1e-17]} {Dmel: FBgn0050354, UQCR-11L, Ubiquinol-cytochrome c reductase 11 kDa subunit-like, [RH, Score=65.9, Expect=9e-16]} {Smed: dd_Smed_v6_277_0_1, dd_Smed_v6_277_0_1, [RH, Score=78.2, Expect=5e-21]} {RNA1509_1098, RNA1509_17996, RNA1509_40177, RNA1509_53729, RNA1509_9709} {RNA1310_22441.2, RNA1509_1098, RNA1509_40177, RNA1509_53729, RNA1509_9709} {RNA1509_1098, RNA1509_40177, RNA1509_53729, RNA1509_9709, RNA815_25656}
2.	MligTC455_23656	7788	162.26	Mlig455_009502	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.381 Region-enriched R4: 1.254/0.00004	UQCRH	5.983	0.999	0.999	0.996	0.996	0.998	0.995	Mlig455_009502 {REF} {Length: 605} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=83.6]} {Human: ENSG00000173660, UQCRH, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=68.6, Expect=2e-16]} {Mouse: ENSMUSG00000063882, Uqcrh, ubiquinol-cytochrome c reductase hinge protein, [RH, Score=71.2, Expect=1e-17]} {Dmel: FBgn0050354, UQCR-11L, Ubiquinol-cytochrome c reductase 11 kDa subunit-like, [RH, Score=66.6, Expect=4e-16]} {Smed: dd_Smed_v6_277_0_1, dd_Smed_v6_277_0_1, [RH, Score=78.2, Expect=5e-21]} {RNA1509_17996, RNA1509_22553} {RNA1310_57613.2, RNA1509_17996, RNA1509_22553} {RNA1509_17996, RNA1509_22553, RNA815_25656}
3.	MligTC455_51986	9652	201.08	Mlig455_026760	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.222 Region-enriched R4: 1.452/0.00000	UQCRB	2.624	0.826	-	-	0.961	-	0.837	Mlig455_026760 {REF} {Length: 1767} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase complex 14kD subunit [PF02271.18, score=66.8]} {Human: ENSG00000156467, UQCRB, ubiquinol-cytochrome c reductase binding protein, [RH, Score=47.4, Expect=3e-07]} {Mouse: ENSMUSG00000021520, Uqcrb, ubiquinol-cytochrome c reductase binding protein, [RH, Score=50.8, Expect=1e-08]} {Dmel: FBgn0039576, UQCR-14L, Ubiquinol-cytochrome c reductase 14 kDa subunit-like, [RH, Score=43.9, Expect=2e-06]} {Smed: dd_Smed_v6_1442_0_1, dd_Smed_v6_1442_0_1, [RH, Score=48.9, Expect=3e-08]} {RNA1509_19006, RNA1509_3047, RNA1509_745} {RNA1310_28280, RNA1509_19006, RNA1509_3047, RNA1509_745} {RNA1509_19006, RNA1509_3047, RNA1509_745, RNA815_15959.1}
4.	MligTC455_51987	9943	207.14	Mlig455_051775	Neo: - Age: - Region-enriched R4: 1.364/0.00000	UQCRB	2.588	0.828	-	-	0.973	-	0.787	Mlig455_051775 {REF} {Length: 888} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase complex 14kD subunit [PF02271.18, score=66.8]} {Human: ENSG00000156467, UQCRB, ubiquinol-cytochrome c reductase binding protein, [RH, Score=47.4, Expect=3e-07]} {Mouse: ENSMUSG00000021520, Uqcrb, ubiquinol-cytochrome c reductase binding protein, [RH, Score=50.8, Expect=1e-08]} {Dmel: FBgn0039576, UQCR-14L, Ubiquinol-cytochrome c reductase 14 kDa subunit-like, [RH, Score=43.9, Expect=2e-06]} {Smed: dd_Smed_v6_1442_0_1, dd_Smed_v6_1442_0_1, [RH, Score=48.9, Expect=3e-08]} {RNA1509_16736, RNA1509_26440, RNA1509_3352} {RNA1310_28280, RNA1509_16736, RNA1509_26440, RNA1509_3352} {RNA1509_16736, RNA1509_26440, RNA1509_3352, RNA815_15959.1}
5.	MligTC455_32945	12798	266.61	Mlig455_027042	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.206 Region-enriched R4: 1.051/0.00081		2.477	-	-	-	0.722	0.951	0.804	Mlig455_027042 {REF} {Length: 1262} {TRANSSPLICED} {Pfam: Mitochondrial F1F0-ATP synthase, subunit f [PF10206.11, score=107.4]} {Dmel: FBgn0035032, ATPsynF, ATP synthase, subunit F, [RH, Score=77.8, Expect=1e-19]} {Celegans: WBGene00011273, R53.4, Putative ATP synthase subunit f, mitochondrial, [RH, Score=54.7, Expect=2e-10]} {Smed: dd_Smed_v6_776_0_1, dd_Smed_v6_776_0_1, [RH, Score=72.4, Expect=1e-17]} {RNA1509_40782, RNA1509_55624, RNA1509_725, RNA1509_9345} {RNA1310_27098, RNA1509_40782, RNA1509_55624, RNA1509_725, RNA1509_9345} {RNA1509_40782, RNA1509_55624, RNA1509_725, RNA1509_9345, RNA815_11619}
6.	MligTC455_32715	7927	165.14	Mlig455_048846	Neo: Int S/G2/M Age: -		1.857	-	-	-	-	0.907	0.950	Mlig455_048846 {REF} {Length: 542} {TRANSSPLICED} {Pfam: ATP synthase regulation [PF14960.8, score=54.0]} {RNA1509_795} {RNA1310_52206.1, RNA1509_795} {RNA1509_795, RNA815_26551.1}
7.	MligTC455_15910	6253	130.27	Mlig455_046455	Neo: Int S/G2/M Age: -	RPS17	1.796	-	-	-	0.958	-	0.838	Mlig455_046455 {REF} {Length: 583} {TRANSSPLICED} {Pfam: Ribosomal S17 [PF00833.20, score=200.5]} {Human: ENSG00000182774, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]; ENSG00000278229, RPS17, ribosomal protein S17, [RH, Score=198, Expect=1e-66]} {Mouse: ENSMUSG00000061787, Rps17, ribosomal protein S17, [RH, Score=199, Expect=5e-67]} {Dmel: FBgn0005533, RpS17, Ribosomal protein S17, [RH, Score=170, Expect=1e-55]} {Celegans: WBGene00004486, rps-17, 40S ribosomal protein S17, [RH, Score=171, Expect=2e-56]} {Smed: dd_Smed_v6_195_0_1, dd_Smed_v6_195_0_1, [RH, Score=171, Expect=3e-56]} {RNA1509_1256, RNA1509_1542} {RNA1310_57463, RNA1509_1542} {RNA1509_1542, RNA815_12035.3}
8.	MligTC455_22829	22696	472.84	Mlig455_017875	Neo: Int S/G2/M Age: -	RPL9	0.97	-	-	-	-	0.970	-	Mlig455_017875 {REF} {Length: 710} {TRANSSPLICED} {Pfam: Ribosomal protein L6 [PF00347.25, score=114.5]} {Human: ENSG00000163682, RPL9, ribosomal protein L9, [RH, Score=217, Expect=4e-72]} {Mouse: ENSMUSG00000047215, Rpl9, ribosomal protein L9, [RH, Score=218, Expect=2e-72]; ENSMUSG00000062456, Rpl9-ps6, ribosomal protein L9, pseudogene 6, [RH, Score=216, Expect=7e-72]} {Dmel: FBgn0015756, RpL9, Ribosomal protein L9, [RH, Score=231, Expect=9e-78]} {Celegans: WBGene00004420, rpl-9, 60S ribosomal protein L9, [RH, Score=216, Expect=3e-72]} {Smed: dd_Smed_v6_150_0_1, dd_Smed_v6_150_0_1, [RH, Score=235, Expect=1e-79]} {RNA1509_57874} {RNA1310_52091.1, RNA1509_57874} {RNA1509_57874, RNA815_22948}

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