TomoSeq data search

Data search

Results for MligTC455_23830

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23830	29	0.61	Mlig455_047403	Neo: - Age: -		Mlig455_047403 {REF} {Length: 5000} {Pfam: Winged helix-turn helix [PF13551.8, score=24.8]; Homeodomain-like domain [PF13384.8, score=23.6]; DDE superfamily endonuclease [PF13358.8, score=23.3]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.2]; Helix-turn-helix domain [PF13518.8, score=19.6]} {RNA1509_54215} {RNA1310_52309} {RNA815_49809}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_23830

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.594	1.039	0.99957	1.00000
RegionR2	-0.485	1.039	0.99955	1.00000
RegionR3	1.276	1.039	0.30198	0.84378
RegionR4	-0.987	1.039	0.84813	1.00000
RegionR5	1.518	1.039	0.18111	0.45833
RegionR6	0.917	1.039	0.44548	1.00000
RegionR7	1.491	1.039	0.43966	1.00000
RegionR8	-1.136	1.039	0.99964	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.317	1.039	0.99996	1.00000
RegenerationR2	4.45	1.039	0.00190	0.06666
RegenerationR3	2.013	1.039	0.17379	0.60987
RegenerationR4	2.939	1.039	0.05815	0.38697
RegenerationR5	0.011	1.039	0.98243	1.00000
RegenerationR6	1.572	1.039	0.32029	0.66690
RegenerationBL	-1.342	1.039	0.99975	1.00000
RegenerationTP	3.154	1.039	0.20321	0.64478

Genes with expression patterns similar to MligTC455_23830

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23830	29	0.61	Mlig455_047403	Neo: - Age: -		4	1.000	-	-	1.000	1.000	1.000	Mlig455_047403 {REF} {Length: 5000} {Pfam: Winged helix-turn helix [PF13551.8, score=24.8]; Homeodomain-like domain [PF13384.8, score=23.6]; DDE superfamily endonuclease [PF13358.8, score=23.3]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.2]; Helix-turn-helix domain [PF13518.8, score=19.6]} {RNA1509_54215} {RNA1310_52309} {RNA815_49809}
2.	MligTC455_08022	29	0.61	Mlig455_010001, Mlig455_011289, Mlig455_042497, Mlig455_057826, Mlig455_061557	Neo: - Age: -	SETMAR	0.972	-	-	-	-	0.972	-	Mlig455_010001 {REF} {Length: 940} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=34.2]} {RNA1509_2376} {RNA1310_264.1} {RNA815_1768.1} Mlig455_011289 {REF} {Length: 1060} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=33.5]; HTH domain in Mos1 transposase [PF17906.3, score=32.0]; DDE superfamily endonuclease [PF13358.8, score=29.7]; Homeodomain-like domain [PF13565.8, score=24.9]; Integrase core domain [PF00665.28, score=21.6]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=147, Expect=2e-38]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=70.5, Expect=7e-15]} {RNA1509_2376} {RNA1310_264.1} {RNA815_1768.1} Mlig455_042497 {REF} {Length: 370} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=33.5]; HTH domain in Mos1 transposase [PF17906.3, score=32.0]; DDE superfamily endonuclease [PF13358.8, score=29.7]; Homeodomain-like domain [PF13565.8, score=24.9]; Integrase core domain [PF00665.28, score=21.6]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=147, Expect=2e-38]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=70.5, Expect=7e-15]} {RNA1509_39987} {RNA1310_11976} {RNA815_1768.1} Mlig455_057826 {REF} {Length: 1086} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=33.9]; HTH domain in Mos1 transposase [PF17906.3, score=32.3]; Homeodomain-like domain [PF13565.8, score=25.3]; DDE superfamily endonuclease [PF13358.8, score=23.6]; Integrase core domain [PF00665.28, score=22.7]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=115, Expect=1e-27]} {Smed: dd_Smed_v6_47836_0_1, dd_Smed_v6_47836_0_1, [Score=46.2, Expect=5e-07]} {RNA1509_2376} {RNA1310_264.1} {RNA815_1768.1} Mlig455_061557 {REF} {Length: 1930} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=33.5]; HTH domain in Mos1 transposase [PF17906.3, score=32.0]; DDE superfamily endonuclease [PF13358.8, score=29.7]; Homeodomain-like domain [PF13565.8, score=24.9]; Integrase core domain [PF00665.28, score=21.6]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=147, Expect=2e-38]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=70.5, Expect=7e-15]} {RNA1509_39987} {RNA1310_264.1} {RNA815_1768.1}
3.	MligTC455_12268	21	0.44	Mlig455_020458	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_020458 {REF} {Length: 1693} {Pfam: TATA element modulatory factor 1 DNA binding [PF12329.10, score=20.4]} {RNA1509_10012, RNA1509_37655} {RNA1310_23404.1, RNA1509_10012, RNA1509_37655} {RNA1509_10012, RNA1509_37655, RNA815_8343.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_23830

0.61

Mlig455_047403

Neo: -

Age: -

1.000

MligTC455_08022

0.61

Mlig455_010001, Mlig455_011289, Mlig455_042497, Mlig455_057826, Mlig455_061557

Neo: -

Age: -

SETMAR

0.972

Mlig455_010001 {REF} {Length: 940} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=34.2]} {RNA1509_2376} {RNA1310_264.1} {RNA815_1768.1}

Mlig455_011289 {REF} {Length: 1060} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=33.5]; HTH domain in Mos1 transposase [PF17906.3, score=32.0]; DDE superfamily endonuclease [PF13358.8, score=29.7]; Homeodomain-like domain [PF13565.8, score=24.9]; Integrase core domain [PF00665.28, score=21.6]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=147, Expect=2e-38]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=70.5, Expect=7e-15]} {RNA1509_2376} {RNA1310_264.1} {RNA815_1768.1}

Mlig455_042497 {REF} {Length: 370} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=33.5]; HTH domain in Mos1 transposase [PF17906.3, score=32.0]; DDE superfamily endonuclease [PF13358.8, score=29.7]; Homeodomain-like domain [PF13565.8, score=24.9]; Integrase core domain [PF00665.28, score=21.6]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=147, Expect=2e-38]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=70.5, Expect=7e-15]} {RNA1509_39987} {RNA1310_11976} {RNA815_1768.1}

Mlig455_057826 {REF} {Length: 1086} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=33.9]; HTH domain in Mos1 transposase [PF17906.3, score=32.3]; Homeodomain-like domain [PF13565.8, score=25.3]; DDE superfamily endonuclease [PF13358.8, score=23.6]; Integrase core domain [PF00665.28, score=22.7]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=115, Expect=1e-27]} {Smed: dd_Smed_v6_47836_0_1, dd_Smed_v6_47836_0_1, [Score=46.2, Expect=5e-07]} {RNA1509_2376} {RNA1310_264.1} {RNA815_1768.1}

Mlig455_061557 {REF} {Length: 1930} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=33.5]; HTH domain in Mos1 transposase [PF17906.3, score=32.0]; DDE superfamily endonuclease [PF13358.8, score=29.7]; Homeodomain-like domain [PF13565.8, score=24.9]; Integrase core domain [PF00665.28, score=21.6]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=147, Expect=2e-38]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=70.5, Expect=7e-15]} {RNA1509_39987} {RNA1310_264.1} {RNA815_1768.1}

MligTC455_12268

0.44

Mlig455_020458

Neo: -

Age: -

0.95

0.950

Mlig455_020458 {REF} {Length: 1693} {Pfam: TATA element modulatory factor 1 DNA binding [PF12329.10, score=20.4]} {RNA1509_10012, RNA1509_37655} {RNA1310_23404.1, RNA1509_10012, RNA1509_37655} {RNA1509_10012, RNA1509_37655, RNA815_8343.1}