Data search
Results for MligTC455_23887
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23887 | 105 | 2.18 | Mlig455_047042 | Neo: - Age: - |
PGBD4 | Mlig455_047042 {REF} {Length: 2779} {Pfam: Transposase IS4 [PF13843.8, score=66.7]} {Human: ENSG00000182405, PGBD4, piggyBac transposable element derived 4, [Score=78.2, Expect=7e-16]} {Smed: dd_Smed_v6_20008_0_4, dd_Smed_v6_20008_0_4, [RH, Score=52.4, Expect=6e-09]} {RNA1509_12879} {RNA1310_633} {RNA815_21871} |
Cumulative graph for MligTC455_23887
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.893 | 2.136 | 1.00000 | 1.00000 | |
| RegionR2 | -0.241 | 2.136 | 0.83755 | 1.00000 | |
| RegionR3 | 2.448 | 2.136 | 0.02836 | 0.28837 | |
| RegionR4 | 1.916 | 2.136 | 0.10160 | 0.31062 | |
| RegionR5 | 2.111 | 2.136 | 0.04769 | 0.18132 | |
| RegionR6 | 2.303 | 2.136 | 0.05380 | 0.43428 | |
| RegionR7 | 0.457 | 2.136 | 0.66649 | 1.00000 | |
| RegionR8 | -4.102 | 2.136 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.343 | 2.136 | 0.99996 | 1.00000 | |
| RegenerationR2 | 1.38 | 2.136 | 0.16909 | 0.60803 | |
| RegenerationR3 | 0.881 | 2.136 | 0.27520 | 0.70952 | |
| RegenerationR4 | 1.236 | 2.136 | 0.13336 | 0.55171 | |
| RegenerationR5 | 0.532 | 2.136 | 0.48411 | 0.84837 | |
| RegenerationR6 | -0.106 | 2.136 | 0.90756 | 1.00000 | |
| RegenerationBL | 1.495 | 2.136 | 0.39034 | 0.75878 | |
| RegenerationTP | 2.113 | 2.136 | 0.37974 | 0.81500 |
Genes with expression patterns similar to MligTC455_23887
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23887 | 105 | 2.18 | Mlig455_047042 | Neo: - Age: - |
PGBD4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047042 {REF} {Length: 2779} {Pfam: Transposase IS4 [PF13843.8, score=66.7]} {Human: ENSG00000182405, PGBD4, piggyBac transposable element derived 4, [Score=78.2, Expect=7e-16]} {Smed: dd_Smed_v6_20008_0_4, dd_Smed_v6_20008_0_4, [RH, Score=52.4, Expect=6e-09]} {RNA1509_12879} {RNA1310_633} {RNA815_21871} |
| 2. | MligTC455_23336 | 1585 | 33.01 | Mlig455_007789 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.413 Region-enriched R3: 1.631/0.00000 |
3.275 | 0.711 | 0.705 | - | 0.954 | - | 0.905 | Mlig455_007789 {REF} {Length: 2108} {Pfam: PLAC8 family [PF04749.19, score=74.3]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [RH, Score=114, Expect=3e-34]} {RNA1509_26743, RNA1509_28154, RNA1509_5161} {RNA1310_50991, RNA1509_26743, RNA1509_28154} {RNA1509_26743, RNA1509_28154, RNA815_15567.2} | |
| 3. | MligTC455_04549 | 296 | 6.16 | Mlig455_047043 | Neo: - Age: logFC(26M/2M)=0.556 Region-enriched R3: 2.204/0.00044 |
TYMP | 2.705 | - | 0.810 | - | 0.959 | - | 0.936 | Mlig455_047043 {REF} {Length: 2149} {TRANSSPLICED} {Pfam: Glycosyl transferase family, a/b domain [PF00591.23, score=114.4]; Glycosyl transferase family, helical bundle domain [PF02885.19, score=55.5]; Pyrimidine nucleoside phosphorylase C-terminal domain [PF07831.15, score=27.3]} {Human: ENSG00000025708, TYMP, thymidine phosphorylase, [RH, Score=324, Expect=7e-106]} {Mouse: ENSMUSG00000022615, Tymp, thymidine phosphorylase, [RH, Score=320, Expect=1e-104]} {Smed: dd_Smed_v6_869_0_1, dd_Smed_v6_869_0_1, [RH, Score=323, Expect=2e-106]} {RNA1509_12879} {RNA1310_13641} {RNA815_1859} |
| 4. | MligTC455_38438 | 191 | 3.98 | Mlig455_029172 | Neo: - Age: Up-Down-Up |
PISD | 2.433 | - | 0.757 | - | 0.956 | - | 0.720 | Mlig455_029172 {REF} {Length: 2470} {Pfam: Phosphatidylserine decarboxylase [PF02666.17, score=205.9]} {Human: ENSG00000241878, PISD, phosphatidylserine decarboxylase, [RH, Score=301, Expect=2e-99]} {Mouse: ENSMUSG00000093574, Gm20671, predicted gene 20671, [RH, Score=295, Expect=6e-95]; ENSMUSG00000023452, Pisd, phosphatidylserine decarboxylase, [RH, Score=293, Expect=2e-96]} {Dmel: FBgn0026576, CG5991, [RH, Score=280, Expect=1e-90]} {Celegans: WBGene00015159, psd-1, Phosphatidylserine decarboxylase proenzyme, mitochondrial Phosphatidylserine decarboxylase beta chain Phosphatidylserine decarboxylase alpha chain, [RH, Score=217, Expect=2e-67]} {Smed: dd_Smed_v6_10310_0_1, dd_Smed_v6_10310_0_1, [RH, Score=274, Expect=2e-89]} {RNA1509_28822, RNA1509_37960, RNA1509_48149} {RNA1310_18146, RNA1509_28822, RNA1509_37960, RNA1509_48149} {RNA1509_28822, RNA1509_37960, RNA1509_48149, RNA815_8466} |
| 5. | MligTC455_41291 | 2363 | 49.23 | Mlig455_010507, Mlig455_061871 | Neo: - Age: - Region-enriched R3: 1.782/0.00155 |
1.811 | - | - | - | 0.963 | - | 0.848 | Mlig455_010507 {REF} {Length: 928} {TRANSSPLICED} {Smed: dd_Smed_v6_94322_0_1, dd_Smed_v6_94322_0_1, [Score=45.1, Expect=2e-07]} {RNA1509_11044, RNA1509_8005} {RNA1310_37912, RNA1509_11044, RNA1509_8005} {RNA1509_11044, RNA1509_8005, RNA815_35827} Mlig455_061871 {REF} {Length: 1257} {TRANSSPLICED} {Smed: dd_Smed_v6_94322_0_1, dd_Smed_v6_94322_0_1, [Score=44.7, Expect=3e-07]} {RNA1509_11044, RNA1509_52955} {RNA1310_37912, RNA1509_52955} {RNA1509_52955, RNA815_35827} |
|
| 6. | MligTC455_14030 | 366 | 7.63 | Mlig455_038896 | Neo: - Age: logFC(26M/2M)=0.245 Region-enriched R4: 2.424/0.01165 |
NEB | 1.79 | - | - | - | 0.959 | - | 0.831 | Mlig455_038896 {REF} {Length: 2746} {Pfam: Variant SH3 domain [PF14604.8, score=50.8]; SH3 domain [PF00018.30, score=38.8]} {Human: ENSG00000183091, NEB, nebulin, [Score=86.3, Expect=8e-18]} {Mouse: ENSMUSG00000026950, Neb, nebulin, [Score=83.6, Expect=4e-17]; ENSMUSG00000053702, Nebl, nebulette, [Score=80.9, Expect=4e-16]} {Dmel: FBgn0063485, Lasp, [Score=73.9, Expect=9e-15]} {Celegans: WBGene00018367, F42H10.3, LIM and SH3 domain protein F42H10.3, [Score=70.5, Expect=2e-13]} {Smed: dd_Smed_v6_1218_0_1, dd_Smed_v6_1218_0_1, [Score=68.9, Expect=1e-13]} {RNA1509_45682} {RNA1310_28671} {RNA815_18525.1} |
| 7. | MligTC455_28838 | 84 | 1.75 | Mlig455_007557 | Neo: - Age: - Region-enriched R4: 3.260/0.01289 |
1.697 | - | - | - | 0.953 | - | 0.744 | Mlig455_007557 {REF} {Length: 745} {RNA1310_66594.1} {RNA815_40011} | |
| 8. | MligTC455_13410 | 86 | 1.79 | Mlig455_069840 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.116 Region-enriched R5: 3.003/0.02889 |
PBLD | 1.682 | - | - | - | 0.732 | - | 0.950 | Mlig455_069840 {REF} {Length: 1686} {TRANSSPLICED} {Pfam: Phenazine biosynthesis-like protein [PF02567.18, score=184.1]} {Human: ENSG00000108187, PBLD, phenazine biosynthesis like protein domain containing, [RH, Score=188, Expect=2e-57]} {Mouse: ENSMUSG00000112129, Pbld1, phenazine biosynthesis-like protein domain containing 1, [RH, Score=192, Expect=4e-59]} {Celegans: WBGene00011417, T04A11.2, [RH, Score=160, Expect=9e-47]} {RNA1509_44083} {RNA1310_21604} {RNA815_35633} |
| 9. | MligTC455_16765 | 77 | 1.61 | Mlig455_070197 | Neo: - Age: - |
TRHR | 0.966 | - | - | - | - | - | 0.966 | Mlig455_070197 {REF} {Length: 1762} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=60.7]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=53.9, Expect=2e-07]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=54.3, Expect=1e-07]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=53.1, Expect=3e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=74.3, Expect=3e-14]} {Celegans: WBGene00016246, daf-37, G-protein coupled receptor daf-37, [Score=54.3, Expect=7e-08]} {Smed: dd_Smed_v6_25364_0_1, dd_Smed_v6_25364_0_1, [Score=197, Expect=1e-59]} {RNA1310_22159} {RNA815_10331} |
| 10. | MligTC455_38217 | 71 | 1.48 | Mlig455_038564, Mlig455_052193, Mlig455_053460 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_038564 {REF} {Length: 474} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_22137} {RNA815_61625} Mlig455_052193 {REF} {Length: 428} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_22137} {RNA815_61625} Mlig455_053460 {REF} {Length: 474} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_22137} {RNA815_61625} |
|
| 11. | MligTC455_50853 | 70 | 1.46 | Mlig455_032032 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.224 Region-enriched R3: 4.394/0.01527 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_032032 {REF} {Length: 978} {RNA1310_43094.1} {RNA815_28977} | |
| 12. | MligTC455_27909 | 615 | 12.81 | Mlig455_007544, Mlig455_030573 | Neo: Neoblast Age: Down-Up-Up Region-enriched R5: 1.746/0.00090 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_007544 {REF} {Length: 756} {TRANSSPLICED} {RNA1310_36170} {RNA815_7679} Mlig455_030573 {REF} {Length: 754} {TRANSSPLICED} {RNA1310_36170} {RNA815_7679} |
|
| 13. | MligTC455_30549 | 112 | 2.32 | Mlig455_018692 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_018692 {REF} {Length: 1400} {NoTransDecoderORF} {RNA1509_40709} {RNA1310_18972} {RNA815_34163} | |
| 14. | MligTC455_19866 | 483 | 10.05 | Mlig455_053987 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.360 Region-enriched R4: 2.346/0.01408 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_053987 {REF} {Length: 3038} {RNA1509_43528} {RNA1310_35262.2, RNA1509_43528} {RNA1509_43528, RNA815_26662} | |
| 15. | MligTC455_05783 | 1663 | 34.65 | Mlig455_035867, Mlig455_035905 | Neo: - Age: - Region-enriched R3: 2.280/0.00011 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_035867 {REF} {Length: 4052} {Pfam: Beta-lactamase [PF00144.26, score=75.6]} {Smed: dd_Smed_v6_35168_0_1, dd_Smed_v6_35168_0_1, [RH, Score=51.6, Expect=2e-07]} {RNA1509_5240} {RNA1310_3628.1} {RNA815_4303} Mlig455_035905 {REF} {Length: 4358} {Pfam: Beta-lactamase [PF00144.26, score=75.6]} {Smed: dd_Smed_v6_35168_0_1, dd_Smed_v6_35168_0_1, [RH, Score=51.6, Expect=2e-07]} {RNA1509_25549, RNA1509_36720, RNA1509_5240} {RNA1310_3628.1, RNA1509_25549, RNA1509_36720, RNA1509_5240} {RNA1509_25549, RNA1509_36720, RNA1509_5240, RNA815_4303} |
Berezikov Lab - 2020-2021 © ERIBA