Data search


search
Exact
Search

Results for MligTC455_23933

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23933 268 5.58 Mlig455_028818

Neo: -

Age: -

Mlig455_028818 {REF} {Length: 1007} {NoTransDecoderORF} {RNA1509_13267} {RNA1310_68401} {RNA815_33809.2}

Cumulative graph for MligTC455_23933

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.129 3.001 0.92710 1.00000
RegionR2 -0.25 3.001 0.68902 1.00000
RegionR3 0.111 3.001 0.80454 1.00000
RegionR4 -0.043 3.001 0.94259 1.00000
RegionR5 0.829 3.001 0.03100 0.13264
RegionR6 0.204 3.001 0.66440 1.00000
RegionR7 0.111 3.001 0.86384 1.00000
RegionR8 -1.092 3.001 0.25937 0.88012

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.518 3.001 0.28564 0.98454
RegenerationR2 0.023 3.001 0.96777 1.00000
RegenerationR3 -0.342 3.001 0.51993 0.86665
RegenerationR4 0.225 3.001 0.67894 0.94545
RegenerationR5 -0.164 3.001 0.71520 0.95811
RegenerationR6 -0.243 3.001 0.66955 0.90829
RegenerationBL -1.478 3.001 0.17906 0.50772
RegenerationTP 1.024 3.001 0.18051 0.61595


Genes with expression patterns similar to MligTC455_23933

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23933 268 5.58 Mlig455_028818

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_028818 {REF} {Length: 1007} {NoTransDecoderORF} {RNA1509_13267} {RNA1310_68401} {RNA815_33809.2}
2. MligTC455_23932 279 5.81 Mlig455_012192

Neo: -

Age: Up-Up-Down

XKR6 4.921 - 0.993 0.999 0.970 0.994 0.965 Mlig455_012192 {REF} {Length: 2839} {TRANSSPLICED} {Pfam: XK-related protein [PF09815.11, score=275.0]} {Human: ENSG00000171044, XKR6, XK related 6, [Score=183, Expect=3e-50]} {Mouse: ENSMUSG00000035067, Xkr6, X-linked Kx blood group related 6, [Score=175, Expect=2e-47]} {Dmel: FBgn0052579, CG32579, [Score=58.2, Expect=6e-09]} {Celegans: WBGene00000422, ced-8, Cell death abnormality protein 8, [RH, Score=83.6, Expect=5e-17]} {Smed: dd_Smed_v6_11903_0_2, dd_Smed_v6_11903_0_2, [Score=174, Expect=8e-49]} {RNA1509_13267} {RNA1310_18427.1} {RNA815_7595}
3. MligTC455_20452 725 15.1 Mlig455_068384, Mlig455_068393

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.348

Region-specific R5: 3.269

Region-enriched R5: 2.907/0.00000
Region-enriched R4: 2.349/0.01316

2.575 0.850 - 0.954 0.771 - -

Mlig455_068384 {REF} {Length: 3173} {RNA1509_25509} {RNA1310_31646} {RNA815_14776.1}

Mlig455_068393 {REF} {Length: 1739} {TRANSSPLICED} {RNA1509_25509, RNA1509_60017} {RNA1310_31646, RNA1509_25509, RNA1509_60017} {RNA1509_25509, RNA1509_60017, RNA815_14776.1}
4. MligTC455_45176 534 11.12 Mlig455_036711

Neo: -

Age: -

GOLGA2 2.539 - - 0.866 0.954 0.719 - Mlig455_036711 {REF} {Length: 4819} {Pfam: Putative golgin subfamily A member 2-like protein 5 [PF15070.8, score=166.8]; Family with sequence similarity 184, A and B [PF15665.7, score=18.6]} {Human: ENSG00000167110, GOLGA2, golgin A2, [RH, Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000002546, Golga2, golgi autoantigen, golgin subfamily a, 2, [RH, Score=165, Expect=3e-41]} {Dmel: FBgn0034697, GM130, Golgi matrix protein 130 kD, [RH, Score=80.1, Expect=6e-15]} {Celegans: WBGene00018017, golg-2, GOLGi associated coiled-coil protein homolog, [RH, Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_6515_0_1, dd_Smed_v6_6515_0_1, [RH, Score=222, Expect=1e-60]} {RNA1509_16173} {RNA1310_2918, RNA1509_16173} {RNA1509_16173, RNA815_3140.1}
5. MligTC455_43754 692 14.42 Mlig455_031745

Neo: -

Age: Down-Up-Down

KCMF1 1.841 - - - 0.860 0.981 - Mlig455_031745 {REF} {Length: 3165} {TRANSSPLICED} {Pfam: Zinc finger, ZZ type [PF00569.19, score=49.3]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=43.9]} {Human: ENSG00000176407, KCMF1, potassium channel modulatory factor 1, [Score=123, Expect=1e-31]} {Mouse: ENSMUSG00000055239, Kcmf1, potassium channel modulatory factor 1, [Score=122, Expect=2e-31]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=120, Expect=6e-30]} {Celegans: WBGene00022785, ZK652.6, [RH, Score=108, Expect=3e-26]} {Smed: dd_Smed_v6_9359_0_1, dd_Smed_v6_9359_0_1, [Score=123, Expect=2e-31]} {RNA1509_24005, RNA1509_41839, RNA1509_41846, RNA1509_43822, RNA1509_54281, RNA1509_60000} {RNA1310_24582.1, RNA1509_24005, RNA1509_41839, RNA1509_41846, RNA1509_43822, RNA1509_54281, RNA1509_60000} {RNA1509_24005, RNA1509_41839, RNA1509_41846, RNA1509_43822, RNA1509_54281, RNA1509_60000, RNA815_29443}
6. MligTC455_22815 529 11.01 Mlig455_038811

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.353

Region-enriched R5: 1.481/0.00573

PDCD2 1.779 - 0.822 0.957 - - - Mlig455_038811 {REF} {Length: 2963} {Pfam: Programmed cell death protein 2, C-terminal putative domain [PF04194.15, score=100.5]} {Human: ENSG00000071994, PDCD2, programmed cell death 2, [RH, Score=89.4, Expect=3e-19]} {Mouse: ENSMUSG00000014771, Pdcd2, programmed cell death 2, [RH, Score=104, Expect=6e-25]} {Dmel: FBgn0021875, Zfrp8, Zinc finger protein RP-8, [RH, Score=111, Expect=7e-27]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=86.7, Expect=3e-18]} {RNA1509_24796, RNA1509_46537} {RNA1310_18277, RNA1509_46537} {RNA1509_46537, RNA815_12771}
7. MligTC455_43017 3662 76.3 Mlig455_000983

Neo: -

Age: Down-Up-Down

NDUFB7 1.695 - 0.732 - - 0.963 - Mlig455_000983 {REF} {Length: 610} {TRANSSPLICED} {Pfam: NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) [PF05676.15, score=66.1]} {Human: ENSG00000099795, NDUFB7, NADH:ubiquinone oxidoreductase subunit B7, [RH, Score=58.2, Expect=3e-11]} {Mouse: ENSMUSG00000033938, Ndufb7, NADH:ubiquinone oxidoreductase subunit B7, [RH, Score=62.8, Expect=4e-13]} {Dmel: FBgn0030605, ND-B18, NADH dehydrogenase (ubiquinone) B18 subunit, [RH, Score=84.0, Expect=8e-22]} {Celegans: WBGene00008414, D2030.4, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, [RH, Score=75.5, Expect=2e-18]} {Smed: dd_Smed_v6_1252_0_1, dd_Smed_v6_1252_0_1, [RH, Score=92.0, Expect=6e-25]} {RNA1509_17062, RNA1509_19230, RNA1509_5031, RNA1509_54613, RNA1509_5802} {RNA1310_43429.1, RNA1509_17062, RNA1509_19230, RNA1509_5031, RNA1509_5802} {RNA1509_17062, RNA1509_19230, RNA1509_5031, RNA1509_5802, RNA815_11130}
8. MligTC455_51014 196 4.08 Mlig455_025046

Neo: -

Age: -

CDYL2 1.669 - - 0.951 - - 0.718 Mlig455_025046 {REF} {Length: 6070} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=109.9]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=46.2]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=39.7]} {Human: ENSG00000166446, CDYL2, chromodomain Y like 2, [RH, Score=132, Expect=3e-32]} {Mouse: ENSMUSG00000031758, Cdyl2, chromodomain protein, Y chromosome-like 2, [RH, Score=132, Expect=3e-32]} {Dmel: FBgn0035169, CG13890, [Score=84.0, Expect=1e-17]} {Celegans: WBGene00001153, ech-4, Enoyl-CoA Hydratase, [Score=85.1, Expect=2e-17]} {Smed: dd_Smed_v6_11720_0_1, dd_Smed_v6_11720_0_1, [RH, Score=152, Expect=2e-38]} {RNA1509_19839} {RNA1310_4755, RNA1509_19839} {RNA1509_19839, RNA815_1353.1}
9. MligTC455_40706 460 9.58 Mlig455_052689

Neo: -

Age: -

Region-enriched R5: 1.217/0.04116

CCDC174 0.967 - - - - 0.967 - Mlig455_052689 {REF} {Length: 1095} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4078) [PF13300.8, score=45.4]} {Human: ENSG00000154781, CCDC174, coiled-coil domain containing 174, [Score=50.8, Expect=2e-06]} {RNA1509_19175} {RNA1310_28722, RNA1509_19175} {RNA1509_19175, RNA815_14570}
10. MligTC455_51975 203 4.23 Mlig455_064447

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.508

0.962 - - - - - 0.962 Mlig455_064447 {REF} {Length: 843} {RNA1509_54298} {RNA1310_27445, RNA1509_54298} {RNA1509_54298, RNA815_25178}
11. MligTC455_50242 658 13.71 Mlig455_010544, Mlig455_061792, Mlig455_061832

Neo: -

Age: -

Region-enriched R5: 2.437/0.00039

0.961 - - 0.961 - - -

Mlig455_010544 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388, RNA1509_46524} {RNA1310_11073, RNA1509_46524} {RNA1509_46524, RNA815_6049}

Mlig455_061792 {REF} {Length: 2256} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073} {RNA815_6049}

Mlig455_061832 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073, RNA1509_22388} {RNA1509_22388, RNA815_6049}
12. MligTC455_37126 1036 21.59 Mlig455_059720

Neo: -

Age: -

POLR1A 0.96 - - - - 0.960 - Mlig455_059720 {REF} {Length: 1092} {Pfam: RNA polymerase Rpb1, domain 5 [PF04998.19, score=52.0]} {Human: ENSG00000068654, POLR1A, RNA polymerase I subunit A, [Score=120, Expect=2e-30]} {Mouse: ENSMUSG00000049553, Polr1a, polymerase (RNA) I polypeptide A, [Score=120, Expect=1e-30]} {Dmel: FBgn0019938, RpI1, RNA polymerase I subunit, [Score=117, Expect=1e-29]} {Celegans: WBGene00012999, rpoa-1, RNA POlymerase I (A) subunit, [Score=107, Expect=3e-26]} {Smed: dd_Smed_v6_9059_1_1, dd_Smed_v6_9059_1_1, [RH, Score=101, Expect=1e-27]} {RNA1509_15567} {RNA1310_628.3} {RNA815_11233}
13. MligTC455_12678 619 12.9 Mlig455_045627

Neo: Irradiation

Age: logFC(26M/2M)=0.639

Region-enriched R5: 4.117/0.00000
Region-enriched R6: 2.909/0.01829

DCX 0.954 - - 0.954 - - - Mlig455_045627 {REF} {Length: 2742} {Pfam: Doublecortin [PF03607.19, score=120.2]} {Human: ENSG00000077279, DCX, doublecortin, [Score=170, Expect=7e-49]; ENSG00000170390, DCLK2, doublecortin like kinase 2, [Score=166, Expect=4e-45]; ENSG00000133083, DCLK1, doublecortin like kinase 1, [Score=163, Expect=2e-46]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=169, Expect=6e-49]; ENSMUSG00000028078, Dclk2, doublecortin-like kinase 2, [Score=165, Expect=5e-45]; ENSMUSG00000027797, Dclk1, doublecortin-like kinase 1, [Score=164, Expect=5e-47]} {Dmel: FBgn0261387, CG17528, [Score=131, Expect=3e-33]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=152, Expect=3e-40]} {Smed: dd_Smed_v6_13093_0_1, dd_Smed_v6_13093_0_1, [Score=68.6, Expect=2e-12]} {RNA1509_13457, RNA1509_21856, RNA1509_30550} {RNA1310_14746.2, RNA1509_13457, RNA1509_30550} {RNA1509_13457, RNA1509_30550, RNA815_2090.1}
14. MligTC455_16933 502 10.45 Mlig455_022729

Neo: Irradiation

Age: -

Region-enriched R5: 1.943/0.00000

KIF23 0.954 - - 0.954 - - - Mlig455_022729 {REF} {Length: 3615} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=298.5]; Arf6-interacting domain of mitotic kinesin-like protein 1 [PF16540.7, score=92.9]; Microtubule binding [PF16796.7, score=60.9]} {Human: ENSG00000137807, KIF23, kinesin family member 23, [RH, Score=428, Expect=1e-136]} {Mouse: ENSMUSG00000032254, Kif23, kinesin family member 23, [RH, Score=384, Expect=5e-119]} {Dmel: FBgn0011692, pav, pavarotti, [RH, Score=434, Expect=6e-139]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [RH, Score=377, Expect=8e-119]} {Smed: dd_Smed_v6_9585_0_1, dd_Smed_v6_9585_0_1, [RH, Score=276, Expect=9e-82]} {RNA1509_39292} {RNA1310_6447.1, RNA1509_39292} {RNA1509_39292, RNA815_8976}
15. MligTC455_50675 648 13.5 Mlig455_017899

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_017899 {REF} {Length: 2179} {RNA1509_14147, RNA1509_51574, RNA1509_53971} {RNA1310_35088, RNA1509_14147, RNA1509_51574, RNA1509_53971} {RNA1509_14147, RNA1509_51574, RNA1509_53971, RNA815_14923}
16. MligTC455_34814 1342 27.96 Mlig455_060345

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.018/0.00720

WDR12 0.952 - - - - 0.952 - Mlig455_060345 {REF} {Length: 1392} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=97.5]; NLE (NUC135) domain [PF08154.14, score=47.1]} {Human: ENSG00000138442, WDR12, WD repeat domain 12, [RH, Score=164, Expect=1e-45]} {Mouse: ENSMUSG00000026019, Wdr12, WD repeat domain 12, [RH, Score=171, Expect=1e-48]} {Dmel: FBgn0032298, CG6724, [RH, Score=179, Expect=1e-51]} {Celegans: WBGene00018893, wdr-12, Ribosome biogenesis protein WDR12 homolog, [RH, Score=137, Expect=5e-36]} {Smed: dd_Smed_v6_8737_0_1, dd_Smed_v6_8737_0_1, [RH, Score=97.8, Expect=3e-22]} {RNA1509_12483} {RNA1310_20718} {RNA815_8336}
17. MligTC455_43939 861 17.94 Mlig455_015474

Neo: -

Age: Down-Down-Up

0.952 - - 0.952 - - - Mlig455_015474 {REF} {Length: 1415} {TRANSSPLICED} {Celegans: WBGene00017159, F01F1.2, [RH, Score=63.2, Expect=5e-13]} {Smed: dd_Smed_v6_8007_0_1, dd_Smed_v6_8007_0_1, [RH, Score=92.8, Expect=1e-24]} {RNA1509_17851, RNA1509_20652, RNA1509_43590, RNA1509_47839, RNA1509_49930, RNA1509_53748, RNA1509_59062} {RNA1310_21969, RNA1509_17851, RNA1509_20652, RNA1509_43590, RNA1509_47839, RNA1509_49930, RNA1509_53748, RNA1509_59062} {RNA1509_17851, RNA1509_20652, RNA1509_43590, RNA1509_47839, RNA1509_49930, RNA1509_53748, RNA1509_59062, RNA815_11504}
18. MligTC455_12680 212 4.42 Mlig455_045685

Neo: Irradiation

Age: logFC(26M/2M)=0.415

Region-enriched R5: 3.114/0.00000
Region-enriched R7: 2.586/0.01428

DCX 0.951 - - 0.951 - - - Mlig455_045685 {REF} {Length: 2523} {Pfam: Doublecortin [PF03607.19, score=120.2]} {Human: ENSG00000077279, DCX, doublecortin, [Score=170, Expect=7e-49]; ENSG00000170390, DCLK2, doublecortin like kinase 2, [Score=165, Expect=2e-44]; ENSG00000133083, DCLK1, doublecortin like kinase 1, [Score=163, Expect=3e-46]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=169, Expect=6e-49]; ENSMUSG00000028078, Dclk2, doublecortin-like kinase 2, [Score=164, Expect=2e-44]; ENSMUSG00000027797, Dclk1, doublecortin-like kinase 1, [Score=164, Expect=1e-46]} {Dmel: FBgn0261387, CG17528, [Score=132, Expect=2e-33]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=151, Expect=2e-40]} {Smed: dd_Smed_v6_13093_0_1, dd_Smed_v6_13093_0_1, [Score=68.2, Expect=2e-12]} {RNA1509_16450, RNA1509_21856, RNA1509_46615, RNA1509_47795, RNA1509_48068} {RNA1310_14746.2, RNA1509_16450, RNA1509_46615, RNA1509_47795, RNA1509_48068} {RNA1509_16450, RNA1509_46615, RNA1509_47795, RNA1509_48068, RNA815_2090.1}
19. MligTC455_13501 516 10.75 Mlig455_017667, Mlig455_017692, Mlig455_017743

Neo: Germline

Age: Up-Up-Down

Region-enriched R4: 2.932/0.00733

0.951 - - - - 0.951 -

Mlig455_017667 {REF} {Length: 1643} {TRANSSPLICED} {RNA1509_26500} {RNA1310_18837, RNA1509_26500} {RNA1509_26500, RNA815_20396}

Mlig455_017692 {REF} {Length: 1167} {RNA1509_26500} {RNA1310_18837} {RNA815_20396}

Mlig455_017743 {REF} {Length: 1652} {TRANSSPLICED} {RNA1509_26500} {RNA1310_18837} {RNA815_20396}
20. MligTC455_22778 359 7.49 Mlig455_047337

Neo: -

Age: -

Region-specific R5: 2.079

Region-enriched R5: 1.537/0.00003

0.951 - - 0.951 - - - Mlig455_047337 {REF} {Length: 1115} {RNA1509_47955, RNA1509_49869} {RNA1310_2182, RNA1509_47955} {RNA1509_47955, RNA815_46359}
21. MligTC455_50168 391 8.14 Mlig455_013474

Neo: Irradiation

Age: -

Region-specific R5: 4.044

Region-enriched R5: 3.302/0.00000

0.951 - - 0.951 - - - Mlig455_013474 {REF} {Length: 2361} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=25.8]} {RNA1509_12027} {RNA1310_9091} {RNA815_3684}
22. MligTC455_44143 1097 22.84 Mlig455_000462

Neo: Int S/G2/M

Age: Down-Up-Down

GTF2H5 0.95 - - 0.950 - - - Mlig455_000462 {REF} {Length: 302} {TRANSSPLICED} {Pfam: Transcription factor TFIIH complex subunit Tfb5 [PF06331.14, score=90.5]} {Human: ENSG00000272047, GTF2H5, general transcription factor IIH subunit 5, [RH, Score=78.6, Expect=9e-21]} {Mouse: ENSMUSG00000034345, Gtf2h5, general transcription factor IIH, polypeptide 5, [RH, Score=77.4, Expect=2e-20]} {Dmel: FBgn0265968, Tfb5, Transcription factor B5, [RH, Score=84.0, Expect=3e-23]} {Celegans: WBGene00021904, Y55B1AL.2, [RH, Score=63.9, Expect=2e-15]} {Smed: dd_Smed_v6_12021_0_1, dd_Smed_v6_12021_0_1, [RH, Score=50.8, Expect=2e-10]} {RNA1509_15559} {RNA1310_50167} {RNA815_21254}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA