TomoSeq data search

Data search

Results for MligTC455_23940

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23940	117	2.44	Mlig455_069106	Neo: - Age: Up-Up-Up, logFC(26M/2M)=2.188	GRK6	Mlig455_069106 {REF} {Length: 2972} {Pfam: Protein kinase domain [PF00069.27, score=219.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.3]; Regulator of G protein signaling domain [PF00615.21, score=61.5]; Kinase-like [PF14531.8, score=24.1]; Fungal protein kinase [PF17667.3, score=18.0]} {Human: ENSG00000198055, GRK6, G protein-coupled receptor kinase 6, [Score=595, Expect=0.0]; ENSG00000198873, GRK5, G protein-coupled receptor kinase 5, [Score=586, Expect=0.0]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [Score=578, Expect=0.0]} {Mouse: ENSMUSG00000074886, Grk6, G protein-coupled receptor kinase 6, [Score=593, Expect=0.0]; ENSMUSG00000003228, Grk5, G protein-coupled receptor kinase 5, [Score=592, Expect=0.0]} {Dmel: FBgn0261988, Gprk2, G protein-coupled receptor kinase 2, [Score=497, Expect=1e-169]} {Celegans: WBGene00001708, grk-1, G protein-coupled receptor kinase 1, [Score=515, Expect=6e-178]} {Smed: dd_Smed_v6_5929_0_1, dd_Smed_v6_5929_0_1, [Score=657, Expect=0.0]} {RNA1509_5894} {RNA1310_5847.1} {RNA815_1576.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23940

117

2.44

Mlig455_069106

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=2.188

GRK6

Mlig455_069106 {REF} {Length: 2972} {Pfam: Protein kinase domain [PF00069.27, score=219.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.3]; Regulator of G protein signaling domain [PF00615.21, score=61.5]; Kinase-like [PF14531.8, score=24.1]; Fungal protein kinase [PF17667.3, score=18.0]} {Human: ENSG00000198055, GRK6, G protein-coupled receptor kinase 6, [Score=595, Expect=0.0]; ENSG00000198873, GRK5, G protein-coupled receptor kinase 5, [Score=586, Expect=0.0]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [Score=578, Expect=0.0]} {Mouse: ENSMUSG00000074886, Grk6, G protein-coupled receptor kinase 6, [Score=593, Expect=0.0]; ENSMUSG00000003228, Grk5, G protein-coupled receptor kinase 5, [Score=592, Expect=0.0]} {Dmel: FBgn0261988, Gprk2, G protein-coupled receptor kinase 2, [Score=497, Expect=1e-169]} {Celegans: WBGene00001708, grk-1, G protein-coupled receptor kinase 1, [Score=515, Expect=6e-178]} {Smed: dd_Smed_v6_5929_0_1, dd_Smed_v6_5929_0_1, [Score=657, Expect=0.0]} {RNA1509_5894} {RNA1310_5847.1} {RNA815_1576.1}

Cumulative graph for MligTC455_23940

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.757	1.936	0.99966	1.00000
RegionR2	2.562	1.936	0.10579	0.40080
RegionR3	1.418	1.936	0.31525	0.85445
RegionR4	-0.057	1.936	0.99966	1.00000
RegionR5	0.814	1.936	0.52781	0.89026
RegionR6	1.323	1.936	0.31248	0.90167
RegionR7	-1.666	1.936	0.99973	1.00000
RegionR8	-1.636	1.936	0.99975	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.383	1.936	1.00000	1.00000
RegenerationR2	1.608	1.936	0.13328	0.56004
RegenerationR3	1.849	1.936	0.20245	0.63796
RegenerationR4	3.579	1.936	0.01331	0.17922
RegenerationR5	3.116	1.936	0.02958	0.28917
RegenerationR6	2.947	1.936	0.05720	0.29978
RegenerationBL	4.082	1.936	0.04512	0.24307
RegenerationTP	6.214	1.936	0.00896	0.15980

Genes with expression patterns similar to MligTC455_23940

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23940	117	2.44	Mlig455_069106	Neo: - Age: Up-Up-Up, logFC(26M/2M)=2.188	GRK6	4	-	-	1.000	1.000	1.000	1.000	Mlig455_069106 {REF} {Length: 2972} {Pfam: Protein kinase domain [PF00069.27, score=219.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.3]; Regulator of G protein signaling domain [PF00615.21, score=61.5]; Kinase-like [PF14531.8, score=24.1]; Fungal protein kinase [PF17667.3, score=18.0]} {Human: ENSG00000198055, GRK6, G protein-coupled receptor kinase 6, [Score=595, Expect=0.0]; ENSG00000198873, GRK5, G protein-coupled receptor kinase 5, [Score=586, Expect=0.0]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [Score=578, Expect=0.0]} {Mouse: ENSMUSG00000074886, Grk6, G protein-coupled receptor kinase 6, [Score=593, Expect=0.0]; ENSMUSG00000003228, Grk5, G protein-coupled receptor kinase 5, [Score=592, Expect=0.0]} {Dmel: FBgn0261988, Gprk2, G protein-coupled receptor kinase 2, [Score=497, Expect=1e-169]} {Celegans: WBGene00001708, grk-1, G protein-coupled receptor kinase 1, [Score=515, Expect=6e-178]} {Smed: dd_Smed_v6_5929_0_1, dd_Smed_v6_5929_0_1, [Score=657, Expect=0.0]} {RNA1509_5894} {RNA1310_5847.1} {RNA815_1576.1}
2.	MligTC455_08898	44	0.91	Mlig455_023398, Mlig455_045568	Neo: - Age: -	PRR9	1.706	-	-	-	-	0.959	0.747	Mlig455_023398 {REF} {Length: 1264} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=27.2]} {RNA1509_37639} {RNA1310_23440} {RNA815_10032} Mlig455_045568 {REF} {Length: 8230} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=2e-06]} {RNA1509_37639} {RNA1310_23440, RNA1509_37639} {RNA1509_37639, RNA815_10032}
3.	MligTC455_17108	1081	22.52	Mlig455_045167	Neo: - Age: logFC(26M/2M)=0.316	RAPGEF1	0.977	-	-	-	-	0.977	-	Mlig455_045167 {REF} {Length: 4776} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=84.9]} {Human: ENSG00000107263, RAPGEF1, Rap guanine nucleotide exchange factor 1, [RH, Score=185, Expect=3e-47]} {Mouse: ENSMUSG00000039844, Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, [RH, Score=187, Expect=6e-48]} {Dmel: FBgn0259228, C3G, C3G guanyl-nucleotide exchange factor, [RH, Score=165, Expect=5e-41]} {Celegans: WBGene00021320, Y34B4A.4, [RH, Score=174, Expect=1e-44]} {Smed: dd_Smed_v6_11351_0_1, dd_Smed_v6_11351_0_1, [RH, Score=128, Expect=2e-30]} {RNA1509_14166, RNA1509_14480} {RNA1310_2752.1, RNA1509_14166, RNA1509_14480} {RNA1509_14166, RNA1509_14480, RNA815_12010.1}
4.	MligTC455_35865	23	0.48	Mlig455_015690	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_015690 {REF} {Length: 1122} {NoTransDecoderORF} {RNA1509_59554} {RNA1310_33225.1} {RNA815_38499}
5.	MligTC455_37358	147	3.06	Mlig455_036287, Mlig455_062056	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_036287 {REF} {Length: 5254} {RNA1509_10387} {RNA1310_6525.1} {RNA815_3756.1} Mlig455_062056 {REF} {Length: 720} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=22.8]} {RNA1509_25482} {RNA1310_25290} {RNA815_64127}
6.	MligTC455_34069	461	9.61	Mlig455_029308	Neo: - Age: - Regeneration-upregulated BL: 2.807 Regeneration-enriched BL: 2.807	DDOST	0.952	-	-	-	0.952	-	-	Mlig455_029308 {REF} {Length: 2274} {Pfam: Oligosaccharyltransferase 48 kDa subunit beta [PF03345.16, score=408.7]} {Human: ENSG00000244038, DDOST, dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit, [Score=459, Expect=4e-160]} {Mouse: ENSMUSG00000028757, Ddost, dolichyl-di-phosphooligosaccharide-protein glycotransferase, [Score=457, Expect=2e-159]} {Dmel: FBgn0014868, Ost48, Oligosaccharyltransferase 48kD subunit, [Score=427, Expect=2e-147]} {Celegans: WBGene00011638, ostb-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit, [Score=352, Expect=2e-118]} {Smed: dd_Smed_v6_948_0_1, dd_Smed_v6_948_0_1, [Score=418, Expect=2e-144]} {RNA1509_28474, RNA1509_36848, RNA1509_5836} {RNA1310_16153.1, RNA1509_28474, RNA1509_36848} {RNA1509_28474, RNA1509_36848, RNA815_8385}