TomoSeq data search

Data search

Results for MligTC455_37358

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37358

147

3.06

Mlig455_036287, Mlig455_062056

Neo: -

Age: -

Mlig455_036287 {REF} {Length: 5254} {RNA1509_10387} {RNA1310_6525.1} {RNA815_3756.1}

Mlig455_062056 {REF} {Length: 720} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=22.8]} {RNA1509_25482} {RNA1310_25290} {RNA815_64127}

Cumulative graph for MligTC455_37358

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.008	2.267	0.99810	1.00000
RegionR2	0.682	2.267	0.44364	0.83258
RegionR3	-1.159	2.267	0.12903	0.61713
RegionR4	-0.949	2.267	0.24520	0.54358
RegionR5	-0.069	2.267	0.90687	1.00000
RegionR6	-0.297	2.267	0.68624	1.00000
RegionR7	0.895	2.267	0.34825	0.98562
RegionR8	0.89	2.267	0.46138	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.189	2.267	0.50784	1.00000
RegenerationR2	1.11	2.267	0.08932	0.47802
RegenerationR3	1.966	2.267	0.02232	0.27107
RegenerationR4	0.91	2.267	0.24417	0.69245
RegenerationR5	0.602	2.267	0.37955	0.78645
RegenerationR6	1.326	2.267	0.10993	0.40979
RegenerationBL	-0.814	2.267	0.51975	0.88186
RegenerationTP	1.559	2.267	0.08248	0.45562

Genes with expression patterns similar to MligTC455_37358

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37358	147	3.06	Mlig455_036287, Mlig455_062056	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036287 {REF} {Length: 5254} {RNA1509_10387} {RNA1310_6525.1} {RNA815_3756.1} Mlig455_062056 {REF} {Length: 720} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=22.8]} {RNA1509_25482} {RNA1310_25290} {RNA815_64127}
2.	MligTC455_39704	807	16.82	Mlig455_042696	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.543 Region-enriched R5: 1.121/0.00386	ARL8B	2.57	-	-	-	0.745	0.964	0.861	Mlig455_042696 {REF} {Length: 3978} {Pfam: ADP-ribosylation factor family [PF00025.23, score=158.6]; Ras family [PF00071.24, score=71.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=59.7]; Gtr1/RagA G protein conserved region [PF04670.14, score=35.3]; G-protein alpha subunit [PF00503.22, score=33.9]; 50S ribosome-binding GTPase [PF01926.25, score=31.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=31.3]} {Human: ENSG00000134108, ARL8B, ADP ribosylation factor like GTPase 8B, [RH, Score=342, Expect=2e-121]; ENSG00000143862, ARL8A, ADP ribosylation factor like GTPase 8A, [RH, Score=336, Expect=3e-119]} {Mouse: ENSMUSG00000030105, Arl8b, ADP-ribosylation factor-like 8B, [RH, Score=342, Expect=1e-121]; ENSMUSG00000026426, Arl8a, ADP-ribosylation factor-like 8A, [RH, Score=336, Expect=2e-119]} {Dmel: FBgn0037551, Gie, GTPase indispensable for equal segregation of chromosomes, [RH, Score=333, Expect=2e-118]} {Celegans: WBGene00000192, arl-8, ARF-Like; Novel small G protein indispensable for equal chromosome segregation, [RH, Score=333, Expect=2e-118]} {Smed: dd_Smed_v6_2465_0_1, dd_Smed_v6_2465_0_1, [RH, Score=332, Expect=1e-117]} {RNA1509_7157} {RNA1310_14459, RNA1509_7157} {RNA1509_7157, RNA815_8799.2}
3.	MligTC455_24511	45	0.93	Mlig455_030652	Neo: - Age: -		1.738	-	-	0.964	-	0.774	-	Mlig455_030652 {REF} {Length: 1591} {TRANSSPLICED} {RNA1509_32433} {RNA1310_19716} {RNA815_13109}
4.	MligTC455_16943	3243	67.57	Mlig455_015939, Mlig455_059704	Neo: - Age: logFC(26M/2M)=-0.433 Region-enriched R7: 1.287/0.00682 Region-enriched R6: 1.072/0.03826 Regeneration-downregulated BL: -2.106 Regeneration-depleted BL: -2.106		1.705	-	-	-	0.954	-	0.751	Mlig455_015939 {REF} {Length: 1575} {RNA1509_17366} {RNA1310_24251} {RNA815_10435} Mlig455_059704 {REF} {Length: 2179} {RNA1509_17366} {RNA1310_24251, RNA1509_17366} {RNA1509_17366, RNA815_10435}
5.	MligTC455_28636	135	2.8	Mlig455_046879	Neo: - Age: - Region-enriched R2: 3.948/0.00711	PHKA1	0.962	-	-	0.962	-	-	-	Mlig455_046879 {REF} {Length: 7306} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 15 [PF00723.23, score=349.3]; Phosphorylase b kinase C-terminal domain [PF19292.1, score=85.7]} {Human: ENSG00000067177, PHKA1, phosphorylase kinase regulatory subunit alpha 1, [Score=593, Expect=0.0]; ENSG00000044446, PHKA2, phosphorylase kinase regulatory subunit alpha 2, [Score=583, Expect=0.0]} {Mouse: ENSMUSG00000031295, Phka2, phosphorylase kinase alpha 2, [Score=597, Expect=0.0]; ENSMUSG00000034055, Phka1, phosphorylase kinase alpha 1, [Score=591, Expect=0.0]} {Dmel: FBgn0030087, CG7766, [Score=623, Expect=0.0]} {Celegans: WBGene00015754, C14B9.8, Probable phosphorylase b kinase regulatory subunit alpha, [Score=751, Expect=0.0]} {Smed: dd_Smed_v6_6919_0_1, dd_Smed_v6_6919_0_1, [Score=1031, Expect=0.0]} {RNA1509_9598} {RNA1310_2181, RNA1509_9598} {RNA1509_9598, RNA815_2765}
6.	MligTC455_46599	1220	25.42	Mlig455_013377	Neo: - Age: - Region-enriched R7: 4.322/0.00000 Region-enriched R6: 3.519/0.00002 Regeneration-downregulated BL: -3.731 Regeneration-depleted BL: -3.731	CALB2	0.961	-	-	-	0.961	-	-	Mlig455_013377 {REF} {Length: 4778} {Pfam: EF hand [PF00036.34, score=120.9]; EF-hand domain [PF13405.8, score=114.5]; EF-hand domain pair [PF13499.8, score=88.6]; EF hand [PF13202.8, score=82.4]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=33.8]; EF-hand domain pair [PF13833.8, score=32.5]} {Human: ENSG00000172137, CALB2, calbindin 2, [RH, Score=219, Expect=7e-70]; ENSG00000282830, CALB2, calbindin 2, [RH, Score=219, Expect=7e-70]} {Mouse: ENSMUSG00000003657, Calb2, calbindin 2, [RH, Score=218, Expect=1e-69]} {Dmel: FBgn0004580, Cbp53E, Calbindin 53E, [RH, Score=360, Expect=4e-125]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=50.8, Expect=1e-07]} {Smed: dd_Smed_v6_1230_0_1, dd_Smed_v6_1230_0_1, [RH, Score=422, Expect=3e-150]} {RNA1509_11338} {RNA1310_24068, RNA1509_11338} {RNA1509_11338, RNA815_10142}
7.	MligTC455_46235	10	0.22	Mlig455_036340, Mlig455_036383	Neo: - Age: -		0.96	-	-	0.960	-	-	-	Mlig455_036340 {REF} {Length: 1148} {Pfam: Glycine rich protein family [PF07172.13, score=21.7]} {RNA1310_96230} Mlig455_036383 {REF} {Length: 2004} {Pfam: Glycine rich protein family [PF07172.13, score=21.3]} {RNA1310_96230} {RNA815_9424.1}
8.	MligTC455_23940	117	2.44	Mlig455_069106	Neo: - Age: Up-Up-Up, logFC(26M/2M)=2.188	GRK6	0.958	-	-	-	-	0.958	-	Mlig455_069106 {REF} {Length: 2972} {Pfam: Protein kinase domain [PF00069.27, score=219.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.3]; Regulator of G protein signaling domain [PF00615.21, score=61.5]; Kinase-like [PF14531.8, score=24.1]; Fungal protein kinase [PF17667.3, score=18.0]} {Human: ENSG00000198055, GRK6, G protein-coupled receptor kinase 6, [Score=595, Expect=0.0]; ENSG00000198873, GRK5, G protein-coupled receptor kinase 5, [Score=586, Expect=0.0]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [Score=578, Expect=0.0]} {Mouse: ENSMUSG00000074886, Grk6, G protein-coupled receptor kinase 6, [Score=593, Expect=0.0]; ENSMUSG00000003228, Grk5, G protein-coupled receptor kinase 5, [Score=592, Expect=0.0]} {Dmel: FBgn0261988, Gprk2, G protein-coupled receptor kinase 2, [Score=497, Expect=1e-169]} {Celegans: WBGene00001708, grk-1, G protein-coupled receptor kinase 1, [Score=515, Expect=6e-178]} {Smed: dd_Smed_v6_5929_0_1, dd_Smed_v6_5929_0_1, [Score=657, Expect=0.0]} {RNA1509_5894} {RNA1310_5847.1} {RNA815_1576.1}
9.	MligTC455_22270	46	0.95	Mlig455_019956	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_019956 {REF} {Length: 4522} {NoTransDecoderORF} {RNA1509_52997} {RNA1310_30849} {RNA815_20481.1}
10.	MligTC455_40708	153	3.19	Mlig455_067130	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.714		0.954	-	-	0.954	-	-	-	Mlig455_067130 {REF} {Length: 503} {RNA1509_33165} {RNA1310_72431} {RNA815_38214}
11.	MligTC455_14008	124	2.58	Mlig455_025850, Mlig455_025912, Mlig455_025945	Neo: - Age: logFC(26M/2M)=-0.370		0.953	-	-	0.953	-	-	-	Mlig455_025850 {REF} {Length: 3979} {Pfam: Dynamin family [PF00350.25, score=56.0]; 50S ribosome-binding GTPase [PF01926.25, score=38.2]} {Smed: dd_Smed_v6_8986_0_1, dd_Smed_v6_8986_0_1, [Score=92.0, Expect=6e-19]} {RNA1509_45083} {RNA1310_6827.1} {RNA815_14800} Mlig455_025912 {REF} {Length: 2618} {Pfam: Dynamin family [PF00350.25, score=57.7]; 50S ribosome-binding GTPase [PF01926.25, score=39.3]} {Smed: dd_Smed_v6_8986_0_1, dd_Smed_v6_8986_0_1, [Score=91.3, Expect=4e-19]} {RNA1509_45083} {RNA1310_9898} {RNA815_14800} Mlig455_025945 {REF} {Length: 4199} {Pfam: Dynamin family [PF00350.25, score=56.0]; 50S ribosome-binding GTPase [PF01926.25, score=38.3]} {Smed: dd_Smed_v6_8986_0_1, dd_Smed_v6_8986_0_1, [Score=87.4, Expect=2e-17]} {RNA1509_45083} {RNA1310_6827.1, RNA1509_45083} {RNA1509_45083, RNA815_12324}

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