Data search
Results for MligTC455_24005
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24005 | 473 | 9.85 | Mlig455_067507 | Neo: - Age: - |
Mlig455_067507 {REF} {Length: 4596} {RNA1509_42627} {RNA1310_7895, RNA1509_42627} {RNA1509_42627, RNA815_20860} |
Cumulative graph for MligTC455_24005
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.012 | 3.641 | 0.34319 | 0.98733 | |
| RegionR2 | -0.114 | 3.641 | 0.82224 | 1.00000 | |
| RegionR3 | -0.866 | 3.641 | 0.04632 | 0.37656 | |
| RegionR4 | -0.236 | 3.641 | 0.62143 | 0.93127 | |
| RegionR5 | 0.366 | 3.641 | 0.28044 | 0.60887 | |
| RegionR6 | -0.057 | 3.641 | 0.89158 | 1.00000 | |
| RegionR7 | 0.5 | 3.641 | 0.35105 | 0.98724 | |
| RegionR8 | -0.605 | 3.641 | 0.46321 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.527 | 3.641 | 0.34967 | 1.00000 | |
| RegenerationR2 | 0.497 | 3.641 | 0.19594 | 0.64031 | |
| RegenerationR3 | 0.695 | 3.641 | 0.14258 | 0.56909 | |
| RegenerationR4 | 0.042 | 3.641 | 0.92640 | 1.00000 | |
| RegenerationR5 | 0.254 | 3.641 | 0.50405 | 0.86054 | |
| RegenerationR6 | 0.98 | 3.641 | 0.02334 | 0.18972 | |
| RegenerationBL | 0.54 | 3.641 | 0.34312 | 0.71017 | |
| RegenerationTP | -0.146 | 3.641 | 0.83460 | 1.00000 |
Genes with expression patterns similar to MligTC455_24005
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24005 | 473 | 9.85 | Mlig455_067507 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_067507 {REF} {Length: 4596} {RNA1509_42627} {RNA1310_7895, RNA1509_42627} {RNA1509_42627, RNA815_20860} | |
| 2. | MligTC455_49474 | 238 | 4.95 | Mlig455_060127 | Neo: - Age: - |
STUB1 | 2.427 | 0.739 | - | - | 0.731 | - | 0.957 | Mlig455_060127 {REF} {Length: 1907} {TRANSSPLICED} {Pfam: U-box domain [PF04564.17, score=93.3]; CHIP N-terminal tetratricopeptide repeat domain [PF18391.3, score=71.2]; Tetratricopeptide repeat [PF00515.30, score=54.4]; Tetratricopeptide repeat [PF07719.19, score=51.7]; Tetratricopeptide repeat [PF13424.8, score=39.1]; TPR repeat [PF13414.8, score=36.7]; Tetratricopeptide repeat [PF13432.8, score=32.7]; Tetratricopeptide repeat [PF13181.8, score=32.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=27.4]; Tetratricopeptide repeat [PF13428.8, score=25.9]; Tetratricopeptide repeat [PF13176.8, score=25.8]; Tetratricopeptide repeat [PF13374.8, score=22.6]; Tetratricopeptide repeat [PF14559.8, score=21.9]; Tetratricopeptide repeat [PF13174.8, score=21.5]} {Human: ENSG00000103266, STUB1, STIP1 homology and U-box containing protein 1, [RH, Score=294, Expect=3e-99]} {Mouse: ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [RH, Score=293, Expect=7e-99]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [RH, Score=306, Expect=3e-104]} {Celegans: WBGene00000500, chn-1, C-term of Hsp70-iNteracting protein (CHIP family); Hsp70-interacting protein, [RH, Score=215, Expect=5e-69]} {Smed: dd_Smed_v6_2121_0_1, dd_Smed_v6_2121_0_1, [RH, Score=290, Expect=4e-98]} {RNA1509_17879} {RNA1310_28517} {RNA815_11702} |
| 3. | MligTC455_17145 | 702 | 14.63 | Mlig455_056467 | Neo: Int S/G2/M Age: - |
PGLS | 1.798 | - | - | 0.827 | - | - | 0.971 | Mlig455_056467 {REF} {Length: 3338} {TRANSSPLICED} {Pfam: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase [PF01182.22, score=199.7]} {Human: ENSG00000130313, PGLS, 6-phosphogluconolactonase, [RH, Score=166, Expect=4e-50]} {Mouse: ENSMUSG00000031807, Pgls, 6-phosphogluconolactonase, [RH, Score=165, Expect=5e-50]} {Dmel: FBgn0030239, CG17333, [RH, Score=153, Expect=1e-45]} {Celegans: WBGene00013301, Y57G11C.3, Putative 6-phosphogluconolactonase, [RH, Score=105, Expect=6e-27]} {Smed: dd_Smed_v6_7692_0_1, dd_Smed_v6_7692_0_1, [RH, Score=126, Expect=2e-35]} {RNA1509_16180, RNA1509_19348, RNA1509_34841} {RNA1310_27930.1, RNA1509_16180, RNA1509_19348, RNA1509_34841} {RNA1509_16180, RNA1509_19348, RNA1509_34841, RNA815_18029} |
| 4. | MligTC455_42999 | 650 | 13.55 | Mlig455_050082 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.377 Regeneration-upregulated BL: 3.339 Regeneration-enriched BL: 3.339 |
1.73 | 0.774 | - | - | - | - | 0.956 | Mlig455_050082 {REF} {Length: 2748} {Pfam: Seryl-tRNA synthetase N-terminal domain [PF02403.24, score=26.3]; Snapin/Pallidin [PF14712.8, score=23.3]; Fez1 [PF06818.17, score=21.6]; Crescentin protein [PF19220.2, score=17.7]} {RNA1509_12731} {RNA1310_34600} {RNA815_16012} | |
| 5. | MligTC455_23260 | 367 | 7.64 | Mlig455_048753 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 2.722/0.00477 |
MCPH1 | 1.723 | - | - | 0.766 | - | - | 0.957 | Mlig455_048753 {REF} {Length: 5462} {TRANSSPLICED} {Pfam: BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=49.9]; twin BRCT domain [PF12738.9, score=38.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=35.9]; BRCA1 C Terminus (BRCT) domain [PF18428.3, score=22.5]} {Human: ENSG00000285262, MCPH1, microcephalin 1, [RH, Score=59.7, Expect=2e-08]; ENSG00000147316, MCPH1, microcephalin 1, [RH, Score=59.7, Expect=2e-08]} {Mouse: ENSMUSG00000039842, Mcph1, microcephaly, primary autosomal recessive 1, [RH, Score=56.2, Expect=2e-07]} {Dmel: FBgn0260959, MCPH1, Microcephalin, [RH, Score=71.6, Expect=3e-12]} {Smed: dd_Smed_v6_14029_0_1, dd_Smed_v6_14029_0_1, [RH, Score=99.4, Expect=6e-21]} {RNA1509_8517} {RNA1310_2320.1, RNA1509_8517} {RNA1509_8517, RNA815_744} |
| 6. | MligTC455_23268 | 269 | 5.61 | Mlig455_000614 | Neo: - Age: logFC(26M/2M)=-0.274 |
GBF1 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_000614 {REF} {Length: 7842} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=215.2]; Guanine nucleotide exchange factor in Golgi transport N-terminal [PF12783.9, score=75.0]} {Human: ENSG00000107862, GBF1, golgi brefeldin A resistant guanine nucleotide exchange factor 1, [Score=1324, Expect=0.0]} {Mouse: ENSMUSG00000025224, Gbf1, golgi-specific brefeldin A-resistance factor 1, [Score=1318, Expect=0.0]} {Dmel: FBgn0264560, garz, gartenzwerg, [Score=984, Expect=0.0]} {Celegans: WBGene00007703, gbf-1, [Score=827, Expect=0.0]} {Smed: dd_Smed_v6_8011_0_1, dd_Smed_v6_8011_0_1, [Score=790, Expect=0.0]} {RNA1509_19282} {RNA1310_634} {RNA815_524} |
| 7. | MligTC455_44708 | 1291 | 26.9 | Mlig455_063420, Mlig455_066634 | Neo: - Age: - Regeneration-upregulated BL: 1.724 Regeneration-enriched BL: 1.724 |
NDEL1 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_063420 {REF} {Length: 2131} {TRANSSPLICED} {Pfam: NUDE protein, C-terminal conserved region [PF04880.15, score=66.1]} {Human: ENSG00000166579, NDEL1, nudE neurodevelopment protein 1 like 1, [RH, Score=192, Expect=2e-57]; ENSG00000275911, NDE1, nudE neurodevelopment protein 1, [RH, Score=186, Expect=4e-55]; ENSG00000072864, NDE1, nudE neurodevelopment protein 1, [RH, Score=186, Expect=4e-55]} {Mouse: ENSMUSG00000018736, Ndel1, nudE neurodevelopment protein 1 like 1, [RH, Score=191, Expect=2e-57]; ENSMUSG00000022678, Nde1, nudE neurodevelopment protein 1, [RH, Score=189, Expect=2e-56]} {Dmel: FBgn0036059, nudE, [RH, Score=114, Expect=2e-28]} {Celegans: WBGene00011230, nud-2, Aspergillus NUclear Division related, [Score=55.8, Expect=1e-08]} {Smed: dd_Smed_v6_1670_0_1, dd_Smed_v6_1670_0_1, [RH, Score=155, Expect=2e-43]} {RNA1509_18131, RNA1509_46395} {RNA1310_12291, RNA1509_18131, RNA1509_46395} {RNA1509_18131, RNA1509_46395, RNA815_21817} Mlig455_066634 {REF} {Length: 2098} {TRANSSPLICED} {Pfam: NUDE protein, C-terminal conserved region [PF04880.15, score=65.8]} {Human: ENSG00000166579, NDEL1, nudE neurodevelopment protein 1 like 1, [RH, Score=193, Expect=6e-58]; ENSG00000275911, NDE1, nudE neurodevelopment protein 1, [RH, Score=186, Expect=3e-55]; ENSG00000072864, NDE1, nudE neurodevelopment protein 1, [RH, Score=186, Expect=3e-55]} {Mouse: ENSMUSG00000018736, Ndel1, nudE neurodevelopment protein 1 like 1, [RH, Score=193, Expect=4e-58]; ENSMUSG00000022678, Nde1, nudE neurodevelopment protein 1, [RH, Score=189, Expect=2e-56]} {Dmel: FBgn0036059, nudE, [RH, Score=115, Expect=6e-29]} {Celegans: WBGene00011230, nud-2, Aspergillus NUclear Division related, [Score=55.8, Expect=1e-08]} {Smed: dd_Smed_v6_1670_0_1, dd_Smed_v6_1670_0_1, [RH, Score=154, Expect=2e-43]} {RNA1509_46395} {RNA1310_12291} {RNA815_21817} |
| 8. | MligTC455_54184 | 1517 | 31.61 | Mlig455_049784, Mlig455_052892 | Neo: - Age: logFC(26M/2M)=0.203 Region-enriched R6: 1.732/0.00062 |
SEPT7 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_049784 {REF} {Length: 3762} {TRANSSPLICED} {Pfam: Septin [PF00735.20, score=361.1]; 50S ribosome-binding GTPase [PF01926.25, score=36.0]; AIG1 family [PF04548.18, score=22.4]; RsgA GTPase [PF03193.18, score=22.1]; AAA domain [PF13476.8, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.6]} {Human: ENSG00000122545, SEPT7, septin 7, [RH, Score=476, Expect=7e-165]} {Mouse: ENSMUSG00000001833, Sept7, septin 7, [RH, Score=475, Expect=7e-165]} {Dmel: FBgn0013726, pnut, peanut, [RH, Score=458, Expect=8e-157]} {Celegans: WBGene00006793, unc-59, [RH, Score=334, Expect=1e-109]} {Smed: dd_Smed_v6_2641_0_1, dd_Smed_v6_2641_0_1, [RH, Score=457, Expect=4e-157]} {RNA1509_10031, RNA1509_25851, RNA1509_35477} {RNA1310_14438.1, RNA1509_10031, RNA1509_25851, RNA1509_35477} {RNA1509_10031, RNA1509_25851, RNA1509_35477, RNA815_10203} Mlig455_052892 {REF} {Length: 4030} {TRANSSPLICED} {Pfam: Septin [PF00735.20, score=361.2]; 50S ribosome-binding GTPase [PF01926.25, score=36.0]; AIG1 family [PF04548.18, score=22.4]; RsgA GTPase [PF03193.18, score=22.1]; AAA domain [PF13476.8, score=19.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.3]} {Human: ENSG00000122545, SEPT7, septin 7, [RH, Score=475, Expect=1e-164]} {Mouse: ENSMUSG00000001833, Sept7, septin 7, [RH, Score=475, Expect=9e-165]} {Dmel: FBgn0013726, pnut, peanut, [RH, Score=460, Expect=2e-157]} {Celegans: WBGene00006793, unc-59, [RH, Score=334, Expect=2e-109]} {Smed: dd_Smed_v6_2641_0_1, dd_Smed_v6_2641_0_1, [RH, Score=456, Expect=5e-157]} {RNA1509_10031, RNA1509_32674, RNA1509_54877} {RNA1310_14438.1, RNA1509_32674, RNA1509_54877} {RNA1509_32674, RNA1509_54877, RNA815_10203} |
| 9. | MligTC455_30791 | 474 | 9.88 | Mlig455_059641 | Neo: - Age: Down-Up-Down |
EIF2S2 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_059641 {REF} {Length: 1048} {TRANSSPLICED} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=133.8]} {Human: ENSG00000125977, EIF2S2, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=251, Expect=1e-82]} {Mouse: ENSMUSG00000074656, Eif2s2, eukaryotic translation initiation factor 2, subunit 2 (beta), [RH, Score=256, Expect=4e-85]} {Dmel: FBgn0004926, eIF2beta, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=240, Expect=7e-79]} {Celegans: WBGene00010560, eif-2beta, Eukaryotic translation initiation factor 2 subunit 2, [RH, Score=216, Expect=2e-70]} {Smed: dd_Smed_v6_3764_0_1, dd_Smed_v6_3764_0_1, [RH, Score=182, Expect=1e-57]} {RNA1509_24918} {RNA1310_27097} {RNA815_5088.1} |
| 10. | MligTC455_48107 | 736 | 15.33 | Mlig455_034751 | Neo: - Age: - Region-enriched R2: 1.355/0.02257 |
STXBP1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_034751 {REF} {Length: 3899} {TRANSSPLICED} {Pfam: Sec1 family [PF00995.25, score=402.2]} {Human: ENSG00000136854, STXBP1, syntaxin binding protein 1, [RH, Score=711, Expect=0.0]} {Mouse: ENSMUSG00000026797, Stxbp1, syntaxin binding protein 1, [RH, Score=711, Expect=0.0]} {Dmel: FBgn0004574, Rop, Ras opposite, [RH, Score=685, Expect=0.0]} {Celegans: WBGene00006757, unc-18, Putative acetylcholine regulator unc-18, [RH, Score=628, Expect=0.0]} {Smed: dd_Smed_v6_7111_0_1, dd_Smed_v6_7111_0_1, [RH, Score=809, Expect=0.0]} {RNA1509_17547, RNA1509_29963, RNA1509_4729, RNA1509_7850} {RNA1310_11788.1, RNA1509_17547, RNA1509_29963, RNA1509_7850} {RNA1509_17547, RNA1509_29963, RNA1509_7850, RNA815_1201} |