TomoSeq data search

Data search

Results for MligTC455_23268

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23268

269

5.61

Mlig455_000614

Neo: -

Age: logFC(26M/2M)=-0.274

GBF1

Mlig455_000614 {REF} {Length: 7842} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=215.2]; Guanine nucleotide exchange factor in Golgi transport N-terminal [PF12783.9, score=75.0]} {Human: ENSG00000107862, GBF1, golgi brefeldin A resistant guanine nucleotide exchange factor 1, [Score=1324, Expect=0.0]} {Mouse: ENSMUSG00000025224, Gbf1, golgi-specific brefeldin A-resistance factor 1, [Score=1318, Expect=0.0]} {Dmel: FBgn0264560, garz, gartenzwerg, [Score=984, Expect=0.0]} {Celegans: WBGene00007703, gbf-1, [Score=827, Expect=0.0]} {Smed: dd_Smed_v6_8011_0_1, dd_Smed_v6_8011_0_1, [Score=790, Expect=0.0]} {RNA1509_19282} {RNA1310_634} {RNA815_524}

Cumulative graph for MligTC455_23268

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.324	2.919	0.71674	1.00000
RegionR2	1.981	2.919	0.08620	0.36091
RegionR3	1.344	2.919	0.17931	0.70921
RegionR4	0.313	2.919	0.63671	0.94361
RegionR5	0.599	2.919	0.45647	0.81866
RegionR6	0.266	2.919	0.63536	1.00000
RegionR7	-6.619	2.919	0.00553	0.11741
RegionR8	1.792	2.919	0.11187	0.61987

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.814	2.919	0.29281	0.99076
RegenerationR2	-2.159	2.919	0.06208	0.40889
RegenerationR3	-1.413	2.919	0.22318	0.65855
RegenerationR4	-1.401	2.919	0.22598	0.67450
RegenerationR5	-0.532	2.919	0.63986	0.92699
RegenerationR6	0.179	2.919	0.88257	1.00000
RegenerationBL	1.427	2.919	0.34071	0.70739
RegenerationTP	2.358	2.919	0.20105	0.64243

Genes with expression patterns similar to MligTC455_23268

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23268	269	5.61	Mlig455_000614	Neo: - Age: logFC(26M/2M)=-0.274	GBF1	5	1.000	1.000	1.000	-	1.000	1.000	Mlig455_000614 {REF} {Length: 7842} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=215.2]; Guanine nucleotide exchange factor in Golgi transport N-terminal [PF12783.9, score=75.0]} {Human: ENSG00000107862, GBF1, golgi brefeldin A resistant guanine nucleotide exchange factor 1, [Score=1324, Expect=0.0]} {Mouse: ENSMUSG00000025224, Gbf1, golgi-specific brefeldin A-resistance factor 1, [Score=1318, Expect=0.0]} {Dmel: FBgn0264560, garz, gartenzwerg, [Score=984, Expect=0.0]} {Celegans: WBGene00007703, gbf-1, [Score=827, Expect=0.0]} {Smed: dd_Smed_v6_8011_0_1, dd_Smed_v6_8011_0_1, [Score=790, Expect=0.0]} {RNA1509_19282} {RNA1310_634} {RNA815_524}
2.	MligTC455_47461	351	7.31	Mlig455_059023	Neo: - Age: -	KLHDC2	0.97	-	-	-	-	-	0.970	Mlig455_059023 {REF} {Length: 3259} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13418.8, score=85.8]; Kelch motif [PF13964.8, score=72.1]; Kelch motif [PF13854.8, score=60.0]; Galactose oxidase, central domain [PF13415.8, score=51.1]; Kelch motif [PF07646.17, score=40.8]; Kelch motif [PF01344.27, score=38.8]} {Human: ENSG00000165516, KLHDC2, kelch domain containing 2, [RH, Score=124, Expect=3e-30]} {Mouse: ENSMUSG00000020978, Klhdc2, kelch domain containing 2, [RH, Score=125, Expect=7e-31]} {Dmel: FBgn0040344, CG3711, [Score=62.0, Expect=1e-09]} {Celegans: WBGene00009978, F53E4.1, [Score=59.3, Expect=4e-09]} {Smed: dd_Smed_v6_9892_0_1, dd_Smed_v6_9892_0_1, [RH, Score=96.7, Expect=2e-21]} {RNA1509_12374, RNA1509_47894} {RNA1310_7705.2, RNA1509_12374, RNA1509_47894} {RNA1509_12374, RNA1509_47894, RNA815_5080}
3.	MligTC455_24005	473	9.85	Mlig455_067507	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_067507 {REF} {Length: 4596} {RNA1509_42627} {RNA1310_7895, RNA1509_42627} {RNA1509_42627, RNA815_20860}
4.	MligTC455_49474	238	4.95	Mlig455_060127	Neo: - Age: -	STUB1	0.963	-	-	-	-	-	0.963	Mlig455_060127 {REF} {Length: 1907} {TRANSSPLICED} {Pfam: U-box domain [PF04564.17, score=93.3]; CHIP N-terminal tetratricopeptide repeat domain [PF18391.3, score=71.2]; Tetratricopeptide repeat [PF00515.30, score=54.4]; Tetratricopeptide repeat [PF07719.19, score=51.7]; Tetratricopeptide repeat [PF13424.8, score=39.1]; TPR repeat [PF13414.8, score=36.7]; Tetratricopeptide repeat [PF13432.8, score=32.7]; Tetratricopeptide repeat [PF13181.8, score=32.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=27.4]; Tetratricopeptide repeat [PF13428.8, score=25.9]; Tetratricopeptide repeat [PF13176.8, score=25.8]; Tetratricopeptide repeat [PF13374.8, score=22.6]; Tetratricopeptide repeat [PF14559.8, score=21.9]; Tetratricopeptide repeat [PF13174.8, score=21.5]} {Human: ENSG00000103266, STUB1, STIP1 homology and U-box containing protein 1, [RH, Score=294, Expect=3e-99]} {Mouse: ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [RH, Score=293, Expect=7e-99]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [RH, Score=306, Expect=3e-104]} {Celegans: WBGene00000500, chn-1, C-term of Hsp70-iNteracting protein (CHIP family); Hsp70-interacting protein, [RH, Score=215, Expect=5e-69]} {Smed: dd_Smed_v6_2121_0_1, dd_Smed_v6_2121_0_1, [RH, Score=290, Expect=4e-98]} {RNA1509_17879} {RNA1310_28517} {RNA815_11702}
5.	MligTC455_28004	446	9.28	Mlig455_048494	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_048494 {REF} {Length: 2408} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=29.4]} {RNA1509_25059} {RNA1310_35177} {RNA815_7915.1}
6.	MligTC455_16173	125	2.6	Mlig455_039164	Neo: - Age: -	PHLPP2	0.955	0.955	-	-	-	-	-	Mlig455_039164 {REF} {Length: 6351} {Pfam: Leucine rich repeat [PF13855.8, score=125.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=95.0]; Protein phosphatase 2C [PF00481.23, score=72.3]; Leucine-rich repeat [PF14580.8, score=18.5]} {Human: ENSG00000040199, PHLPP2, PH domain and leucine rich repeat protein phosphatase 2, [Score=382, Expect=8e-111]; ENSG00000081913, PHLPP1, PH domain and leucine rich repeat protein phosphatase 1, [Score=367, Expect=5e-104]} {Mouse: ENSMUSG00000031732, Phlpp2, PH domain and leucine rich repeat protein phosphatase 2, [Score=375, Expect=2e-108]; ENSMUSG00000044340, Phlpp1, PH domain and leucine rich repeat protein phosphatase 1, [Score=370, Expect=3e-105]} {Dmel: FBgn0032749, Phlpp, PH domain leucine-rich repeat protein phosphatase, [Score=186, Expect=1e-47]} {Celegans: WBGene00009647, phlp-2, Protein phosphatase PHLPP-like protein, [Score=268, Expect=2e-73]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=104, Expect=3e-22]} {RNA1509_32447} {RNA1310_1676.1} {RNA815_1956}
7.	MligTC455_42999	650	13.55	Mlig455_050082	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.377 Regeneration-upregulated BL: 3.339 Regeneration-enriched BL: 3.339		0.953	-	-	-	-	-	0.953	Mlig455_050082 {REF} {Length: 2748} {Pfam: Seryl-tRNA synthetase N-terminal domain [PF02403.24, score=26.3]; Snapin/Pallidin [PF14712.8, score=23.3]; Fez1 [PF06818.17, score=21.6]; Crescentin protein [PF19220.2, score=17.7]} {RNA1509_12731} {RNA1310_34600} {RNA815_16012}
8.	MligTC455_37352	210	4.37	Mlig455_012059	Neo: Int S/G2/M Age: -	RNASEH2A	0.951	0.951	-	-	-	-	-	Mlig455_012059 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: Ribonuclease HII [PF01351.20, score=153.5]} {Human: ENSG00000104889, RNASEH2A, ribonuclease H2 subunit A, [RH, Score=232, Expect=4e-74]} {Mouse: ENSMUSG00000052926, Rnaseh2a, ribonuclease H2, large subunit, [RH, Score=234, Expect=5e-75]} {Dmel: FBgn0031252, CG13690, [RH, Score=226, Expect=1e-71]} {Celegans: WBGene00004383, rnh-2, Ribonuclease H2 subunit A, [RH, Score=231, Expect=3e-74]} {Smed: dd_Smed_v6_10404_0_1, dd_Smed_v6_10404_0_1, [RH, Score=261, Expect=8e-86]} {RNA1509_29004} {RNA1310_30632} {RNA815_10850}
9.	MligTC455_42506	551	11.49	Mlig455_044711	Neo: - Age: Up-Down-Down	SPEN	0.951	0.951	-	-	-	-	-	Mlig455_044711 {REF} {Length: 13223} {Pfam: SPOC domain [PF07744.15, score=107.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.3]; Occluded RNA-recognition motif [PF16842.7, score=26.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=224, Expect=2e-57]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=225, Expect=6e-58]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=218, Expect=6e-56]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=94.0, Expect=2e-18]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [RH, Score=190, Expect=1e-47]} {RNA1509_1038, RNA1509_35463} {RNA1310_36.2, RNA1509_35463} {RNA1509_35463, RNA815_326}
10.	MligTC455_24310	169	3.52	Mlig455_044934	Neo: - Age: - Region-enriched R2: 3.442/0.01506	SLC16A12	0.95	0.950	-	-	-	-	-	Mlig455_044934 {REF} {Length: 2374} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=125.7]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [RH, Score=186, Expect=1e-52]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [RH, Score=187, Expect=2e-53]} {Dmel: FBgn0033095, CG3409, [Score=138, Expect=1e-34]} {Celegans: WBGene00021227, mct-1, MonoCarboxylate Transporter family, [Score=117, Expect=3e-28]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=123, Expect=3e-30]} {RNA1509_33089} {RNA1310_9979} {RNA815_6321}

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