TomoSeq data search

Data search

Results for MligTC455_24118

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24118

195

4.06

Mlig455_020031

Neo: -

Age: -

WSCD1

Mlig455_020031 {REF} {Length: 3698} {Pfam: WSC domain [PF01822.21, score=50.6]; PAN domain [PF00024.28, score=25.6]} {Human: ENSG00000179314, WSCD1, WSC domain containing 1, [Score=49.7, Expect=1e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.8, Expect=4e-07]} {Dmel: FBgn0046685, Wsck, [Score=51.6, Expect=2e-07]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=45.4, Expect=1e-05]} {RNA1509_29644, RNA1509_32499, RNA1509_50694, RNA1509_8390} {RNA1310_14504, RNA1509_29644, RNA1509_32499, RNA1509_50694} {RNA1509_29644, RNA1509_32499, RNA1509_50694, RNA815_5424}

Cumulative graph for MligTC455_24118

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.135	2.618	0.14589	0.75855
RegionR2	1.685	2.618	0.10559	0.40042
RegionR3	0.704	2.618	0.49679	0.99300
RegionR4	0.002	2.618	0.85431	1.00000
RegionR5	0.702	2.618	0.46574	0.82784
RegionR6	1.253	2.618	0.19285	0.76058
RegionR7	1.722	2.618	0.10781	0.62329
RegionR8	0.067	2.618	0.85767	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.249	2.618	0.99996	1.00000
RegenerationR2	0.091	2.618	0.88219	1.00000
RegenerationR3	1.089	2.618	0.12789	0.54983
RegenerationR4	1.039	2.618	0.12691	0.54124
RegenerationR5	0.613	2.618	0.33844	0.75674
RegenerationR6	0.838	2.618	0.21990	0.56376
RegenerationBL	-1.232	2.618	0.29234	0.65463
RegenerationTP	1.461	2.618	0.11450	0.51841

Genes with expression patterns similar to MligTC455_24118

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24118	195	4.06	Mlig455_020031	Neo: - Age: -	WSCD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020031 {REF} {Length: 3698} {Pfam: WSC domain [PF01822.21, score=50.6]; PAN domain [PF00024.28, score=25.6]} {Human: ENSG00000179314, WSCD1, WSC domain containing 1, [Score=49.7, Expect=1e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.8, Expect=4e-07]} {Dmel: FBgn0046685, Wsck, [Score=51.6, Expect=2e-07]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=45.4, Expect=1e-05]} {RNA1509_29644, RNA1509_32499, RNA1509_50694, RNA1509_8390} {RNA1310_14504, RNA1509_29644, RNA1509_32499, RNA1509_50694} {RNA1509_29644, RNA1509_32499, RNA1509_50694, RNA815_5424}
2.	MligTC455_38739	39	0.81	Mlig455_014528	Neo: - Age: -		0.97	-	-	-	0.970	-	-	Mlig455_014528 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_13586} {RNA1310_52607} {RNA815_2048.1}
3.	MligTC455_21861	166	3.46	Mlig455_001636	Neo: - Age: -	FAM234B	0.969	0.969	-	-	-	-	-	Mlig455_001636 {REF} {Length: 2805} {Pfam: FG-GAP-like repeat [PF13517.8, score=32.1]; PQQ-like domain [PF13360.8, score=26.1]; PQQ enzyme repeat [PF01011.23, score=25.0]} {Human: ENSG00000084444, FAM234B, family with sequence similarity 234 member B, [RH, Score=60.8, Expect=7e-09]} {Mouse: ENSMUSG00000030207, Fam234b, family with sequence similarity 234, member B, [RH, Score=62.8, Expect=1e-09]} {Dmel: FBgn0038725, CG6184, [Score=192, Expect=2e-50]} {Smed: dd_Smed_v6_12614_0_1, dd_Smed_v6_12614_0_1, [Score=239, Expect=5e-67]} {RNA1509_34189} {RNA1310_7071, RNA1509_34189} {RNA1509_34189, RNA815_18304}
4.	MligTC455_50135	745	15.51	Mlig455_009180, Mlig455_009608	Neo: - Age: logFC(26M/2M)=-0.712 Region-enriched R4: 2.262/0.00372 Regeneration-downregulated BL: -3.226 Regeneration-depleted BL: -3.226		0.961	-	-	-	0.961	-	-	Mlig455_009180 {REF} {Length: 2128} {RNA1310_31163} {RNA815_15301.1} Mlig455_009608 {REF} {Length: 7395} {RNA1509_11387} {RNA1310_25721} {RNA815_15301.1}
5.	MligTC455_43610	1264	26.33	Mlig455_019370, Mlig455_019592, Mlig455_059105	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_019370 {REF} {Length: 2173} {RNA1509_42772} {RNA1310_20901} {RNA815_9013.1} Mlig455_019592 {REF} {Length: 1676} {RNA1509_42772} {RNA1310_20901} {RNA815_9013.1} Mlig455_059105 {REF} {Length: 2167} {RNA1509_42772, RNA1509_55667} {RNA1310_20901, RNA1509_42772, RNA1509_55667} {RNA1509_42772, RNA1509_55667, RNA815_9013.1}
6.	MligTC455_40279	259	5.4	Mlig455_026146	Neo: - Age: Down-Up-Down		0.958	-	-	-	0.958	-	-	Mlig455_026146 {REF} {Length: 2925} {Pfam: Delta serrate ligand [PF01414.21, score=30.7]} {RNA1509_39924} {RNA1310_12761.1, RNA1509_39924} {RNA1509_39924, RNA815_3894.1}
7.	MligTC455_15548	196	4.09	Mlig455_042737	Neo: - Age: -		0.957	0.957	-	-	-	-	-	Mlig455_042737 {REF} {Length: 2401} {RNA1509_18134, RNA1509_57486} {RNA1310_8952.1, RNA1509_57486} {RNA1509_57486, RNA815_5638}
8.	MligTC455_39618	251	5.22	Mlig455_052942	Neo: - Age: - Region-enriched R4: 3.069/0.01891 Region-enriched R5: 2.396/0.01715	MPP6	0.95	0.950	-	-	-	-	-	Mlig455_052942 {REF} {Length: 3174} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=123.6]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=29.1]; PDZ domain [PF00595.26, score=28.2]; L27 domain [PF02828.18, score=24.5]; Variant SH3 domain [PF14604.8, score=22.5]; PDZ domain [PF17820.3, score=21.5]; AAA ATPase domain [PF13191.8, score=20.6]} {Human: ENSG00000105926, MPP6, membrane palmitoylated protein 6, [RH, Score=345, Expect=1e-112]} {Mouse: ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=357, Expect=1e-115]} {Dmel: FBgn0250785, vari, varicose, [RH, Score=323, Expect=3e-102]} {Celegans: WBGene00002991, lin-2, [Score=273, Expect=5e-83]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [RH, Score=416, Expect=4e-138]} {RNA1509_20995} {RNA1310_12223.1} {RNA815_10039}

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