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Results for MligTC455_15548

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15548 196 4.09 Mlig455_042737

Neo: -

Age: -

 Mlig455_042737 {REF} {Length: 2401} {RNA1509_18134, RNA1509_57486} {RNA1310_8952.1, RNA1509_57486} {RNA1509_57486, RNA815_5638}

Cumulative graph for MligTC455_15548

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.783 2.69 0.32003 0.96920
RegionR2 0.115 2.69 0.81531 1.00000
RegionR3 0.349 2.69 0.69008 1.00000
RegionR4 0.88 2.69 0.35136 0.67306
RegionR5 1.167 2.69 0.11550 0.33689
RegionR6 0.569 2.69 0.54701 1.00000
RegionR7 -0.179 2.69 0.90897 1.00000
RegionR8 1.882 2.69 0.12073 0.63955

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.815 2.69 0.35938 1.00000
RegenerationR2 -0.122 2.69 0.80360 0.99080
RegenerationR3 0.231 2.69 0.67925 0.94012
RegenerationR4 0.02 2.69 0.97415 1.00000
RegenerationR5 0.169 2.69 0.69665 0.95042
RegenerationR6 0.464 2.69 0.38289 0.72341
RegenerationBL -1.94 2.69 0.05587 0.27383
RegenerationTP -2.923 2.69 0.02670 0.27509


Genes with expression patterns similar to MligTC455_15548

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15548 196 4.09 Mlig455_042737

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_042737 {REF} {Length: 2401} {RNA1509_18134, RNA1509_57486} {RNA1310_8952.1, RNA1509_57486} {RNA1509_57486, RNA815_5638}
2. MligTC455_27825 356 7.41 Mlig455_007119

Neo: Neoblast, stringent

Age: Up-Down-Down

Region-enriched R4: 1.443/0.04722

 SMC4 1.766 0.812 - - 0.954 - - Mlig455_007119 {REF} {Length: 5158} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=134.9]; SMC proteins Flexible Hinge Domain [PF06470.15, score=85.9]; AAA ATPase domain [PF13175.8, score=32.1]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=27.9]; AAA domain [PF13476.8, score=22.9]; P-loop containing region of AAA domain [PF13555.8, score=22.6]} {Human: ENSG00000113810, SMC4, structural maintenance of chromosomes 4, [RH, Score=589, Expect=0.0]} {Mouse: ENSMUSG00000034349, Smc4, structural maintenance of chromosomes 4, [Score=599, Expect=0.0]} {Dmel: FBgn0015391, glu, gluon, [RH, Score=515, Expect=2e-164]} {Celegans: WBGene00004874, smc-4, Structural maintenance of chromosomes protein 4, [RH, Score=329, Expect=8e-96]} {Smed: dd_Smed_v6_5865_0_4, dd_Smed_v6_5865_0_4, [RH, Score=520, Expect=2e-167]} {RNA1509_3181} {RNA1310_1138.1} {RNA815_2120}
3. MligTC455_43921 1670 34.8 Mlig455_007913, Mlig455_008019

Neo: -

Age: -

 SCAF1 1.748 - - 0.786 0.962 - -

Mlig455_007913 {REF} {Length: 2801} {TRANSSPLICED} {Human: ENSG00000126461, SCAF1, SR-related CTD associated factor 1, [RH, Score=68.2, Expect=4e-11]} {Mouse: ENSMUSG00000038611, Phrf1, PHD and ring finger domains 1, [RH, Score=79.7, Expect=8e-15]} {Dmel: FBgn0037344, CG2926, [Score=70.5, Expect=4e-12]} {Smed: dd_Smed_v6_5142_0_1, dd_Smed_v6_5142_0_1, [Score=96.7, Expect=2e-20]} {RNA1509_11848} {RNA1310_19388} {RNA815_7799}

Mlig455_008019 {REF} {Length: 2867} {Human: ENSG00000126461, SCAF1, SR-related CTD associated factor 1, [RH, Score=67.8, Expect=6e-11]} {Mouse: ENSMUSG00000038611, Phrf1, PHD and ring finger domains 1, [RH, Score=79.3, Expect=1e-14]} {Dmel: FBgn0037344, CG2926, [Score=70.1, Expect=6e-12]} {Smed: dd_Smed_v6_5142_0_1, dd_Smed_v6_5142_0_1, [Score=96.3, Expect=3e-20]} {RNA1509_16788} {RNA1310_19388} {RNA815_7799}
4. MligTC455_41418 653 13.61 Mlig455_022023

Neo: -

Age: -

 1.692 - - - 0.960 - 0.732 Mlig455_022023 {REF} {Length: 2593} {TRANSSPLICED} {RNA1509_10112} {RNA1310_27932} {RNA815_11765.1}
5. MligTC455_48878 246 5.12 Mlig455_000110

Neo: Int S/G2/M

Age: Up-Down-Down

 HACD3 0.969 - - - 0.969 - - Mlig455_000110 {REF} {Length: 3358} {TRANSSPLICED} {Pfam: Protein tyrosine phosphatase-like protein, PTPLA [PF04387.16, score=155.6]; CS domain [PF04969.18, score=23.0]} {Human: ENSG00000074696, HACD3, 3-hydroxyacyl-CoA dehydratase 3, [RH, Score=208, Expect=4e-63]} {Mouse: ENSMUSG00000033629, Hacd3, 3-hydroxyacyl-CoA dehydratase 3, [RH, Score=212, Expect=2e-64]} {Dmel: FBgn0032524, CG9267, [RH, Score=228, Expect=1e-70]} {Celegans: WBGene00020517, hpo-8, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase hpo-8, [Score=94.7, Expect=3e-22]} {Smed: dd_Smed_v6_3998_0_1, dd_Smed_v6_3998_0_1, [RH, Score=287, Expect=2e-93]} {RNA1509_11453} {RNA1310_14107.1, RNA1509_11453} {RNA1509_11453, RNA815_10393}
6. MligTC455_39618 251 5.22 Mlig455_052942

Neo: -

Age: -

Region-enriched R4: 3.069/0.01891
Region-enriched R5: 2.396/0.01715

 MPP6 0.963 0.963 - - - - - Mlig455_052942 {REF} {Length: 3174} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=123.6]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=29.1]; PDZ domain [PF00595.26, score=28.2]; L27 domain [PF02828.18, score=24.5]; Variant SH3 domain [PF14604.8, score=22.5]; PDZ domain [PF17820.3, score=21.5]; AAA ATPase domain [PF13191.8, score=20.6]} {Human: ENSG00000105926, MPP6, membrane palmitoylated protein 6, [RH, Score=345, Expect=1e-112]} {Mouse: ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=357, Expect=1e-115]} {Dmel: FBgn0250785, vari, varicose, [RH, Score=323, Expect=3e-102]} {Celegans: WBGene00002991, lin-2, [Score=273, Expect=5e-83]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [RH, Score=416, Expect=4e-138]} {RNA1509_20995} {RNA1310_12223.1} {RNA815_10039}
7. MligTC455_24118 195 4.06 Mlig455_020031

Neo: -

Age: -

 WSCD1 0.957 0.957 - - - - - Mlig455_020031 {REF} {Length: 3698} {Pfam: WSC domain [PF01822.21, score=50.6]; PAN domain [PF00024.28, score=25.6]} {Human: ENSG00000179314, WSCD1, WSC domain containing 1, [Score=49.7, Expect=1e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.8, Expect=4e-07]} {Dmel: FBgn0046685, Wsck, [Score=51.6, Expect=2e-07]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=45.4, Expect=1e-05]} {RNA1509_29644, RNA1509_32499, RNA1509_50694, RNA1509_8390} {RNA1310_14504, RNA1509_29644, RNA1509_32499, RNA1509_50694} {RNA1509_29644, RNA1509_32499, RNA1509_50694, RNA815_5424}
8. MligTC455_50933 280 5.83 Mlig455_011495

Neo: -

Age: Down-Down-Up

 0.956 0.956 - - - - - Mlig455_011495 {REF} {Length: 3671} {TRANSSPLICED} {RNA1509_11429} {RNA1310_2886.1} {RNA815_8254}
9. MligTC455_39693 41 0.86 Mlig455_063193

Neo: -

Age: Up-Down-Down

 MTCL1 0.953 0.953 - - - - - Mlig455_063193 {REF} {Length: 6739} {Pfam: Protein SOGA [PF11365.10, score=34.5]; Chromatin assembly factor 1 complex p150 subunit, N-terminal [PF11600.10, score=21.5]; Myosin-like coiled-coil protein [PF09728.11, score=20.0]; Growth-arrest specific micro-tubule binding [PF13851.8, score=19.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.6]; Fez1 [PF06818.17, score=19.3]} {Human: ENSG00000168502, MTCL1, microtubule crosslinking factor 1, [RH, Score=102, Expect=6e-21]; ENSG00000149639, SOGA1, suppressor of glucose, autophagy associated 1, [RH, Score=101, Expect=1e-20]} {Mouse: ENSMUSG00000055485, Soga1, suppressor of glucose, autophagy associated 1, [RH, Score=109, Expect=2e-23]; ENSMUSG00000052105, Mtcl1, microtubule crosslinking factor 1, [RH, Score=108, Expect=7e-23]} {Dmel: FBgn0031869, CG18304, [RH, Score=89.7, Expect=2e-17]} {Celegans: WBGene00044079, tag-241, [Score=143, Expect=5e-34]} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [Score=322, Expect=7e-89]} {RNA1509_19671} {RNA1310_1157, RNA1509_19671} {RNA1509_19671, RNA815_16429}
10. MligTC455_52728 106 2.22 Mlig455_070290

Neo: -

Age: -

 0.953 0.953 - - - - - Mlig455_070290 {REF} {Length: 1652} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=55.7]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=18.2]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=128, Expect=4e-34]} {RNA1509_41314} {RNA1310_26265} {RNA815_9728}
11. MligTC455_02553 40 0.83 Mlig455_057382, Mlig455_057405

Neo: -

Age: Up-Down-Up

Region-enriched R2: 4.891/0.03381

 0.952 0.952 - - - - -

Mlig455_057382 {REF} {Length: 445} {NoTransDecoderORF} {RNA1310_52629}

Mlig455_057405 {REF} {Length: 4885} {TRANSSPLICED} {Celegans: WBGene00012980, efhd-1, EF HanD calcium binding protein, [Score=46.2, Expect=8e-06]} {RNA1310_42652} {RNA815_37610}
12. MligTC455_25124 192 4 Mlig455_028759

Neo: Irradiation

Age: -

 TRIM2 0.952 - - - 0.952 - - Mlig455_028759 {REF} {Length: 5021} {Pfam: NHL repeat [PF01436.23, score=39.3]; RING-type zinc-finger [PF13445.8, score=18.7]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=58.2, Expect=4e-08]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=85.9, Expect=5e-17]} {RNA1509_23913} {RNA1310_10840} {RNA815_6531}
13. MligTC455_27544 39 0.81 Mlig455_032949

Neo: -

Age: -

 TRPM3 0.952 0.952 - - - - - Mlig455_032949 {REF} {Length: 6125} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=51.9]; Ankyrin repeats (many copies) [PF13637.8, score=39.2]; Ankyrin repeat [PF13606.8, score=30.5]; Ankyrin repeats (many copies) [PF13857.8, score=27.8]; Ankyrin repeat [PF00023.32, score=26.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=75.9, Expect=4e-13]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.7, Expect=1e-19]} {RNA1509_21241} {RNA1310_1739} {RNA815_2547.1}
14. MligTC455_41029 315 6.57 Mlig455_001243

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.532/0.00118

 0.951 - - - 0.951 - - Mlig455_001243 {REF} {Length: 2211} {TRANSSPLICED} {RNA1509_17371, RNA1509_41016} {RNA1310_31548, RNA1509_17371, RNA1509_41016} {RNA1509_17371, RNA1509_41016, RNA815_26370}
15. MligTC455_52500 1490 31.04 Mlig455_033780

Neo: -

Age: -

Region-enriched R5: 1.829/0.00370
Region-enriched R6: 1.816/0.03386
Region-enriched R4: 1.792/0.02525

 GRHPR 0.951 - - - 0.951 - - Mlig455_033780 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=169.4]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=55.1]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=19.9]} {Human: ENSG00000137106, GRHPR, glyoxylate and hydroxypyruvate reductase, [Score=164, Expect=1e-47]} {Mouse: ENSMUSG00000035637, Grhpr, glyoxylate reductase/hydroxypyruvate reductase, [Score=156, Expect=1e-44]} {Dmel: FBgn0051674, CG31674, [Score=151, Expect=8e-43]} {Celegans: WBGene00007836, C31C9.2, [Score=102, Expect=8e-25]} {Smed: dd_Smed_v6_8767_0_1, dd_Smed_v6_8767_0_1, [Score=174, Expect=7e-52]} {RNA1509_6635} {RNA1310_17744} {RNA815_8969}

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