TomoSeq data search

Data search

Results for MligTC455_24173

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24173	129	2.68	Mlig455_002757, Mlig455_063358	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.484	KCNK5	Mlig455_002757 {REF} {Length: 4268} {Pfam: Ion channel [PF07885.18, score=105.3]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=85.9, Expect=3e-19]} {Mouse: ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=87.4, Expect=6e-20]; ENSMUSG00000046410, Kcnk6, potassium inwardly-rectifying channel, subfamily K, member 6, [Score=87.0, Expect=3e-20]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=80.1, Expect=1e-17]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=82.8, Expect=7e-19]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [Score=89.7, Expect=6e-22]} {RNA1310_31805} {RNA815_15556} Mlig455_063358 {REF} {Length: 4490} {Pfam: Ion channel [PF07885.18, score=104.2]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=88.6, Expect=3e-19]; ENSG00000171303, KCNK3, potassium two pore domain channel subfamily K member 3, [Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=90.1, Expect=5e-20]; ENSMUSG00000046410, Kcnk6, potassium inwardly-rectifying channel, subfamily K, member 6, [Score=87.8, Expect=1e-19]; ENSMUSG00000049265, Kcnk3, potassium channel, subfamily K, member 3, [Score=86.3, Expect=7e-19]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=86.7, Expect=4e-19]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=84.3, Expect=1e-18]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [Score=97.8, Expect=5e-24]} {RNA1310_31805} {RNA815_15556}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24173

129

2.68

Mlig455_002757, Mlig455_063358

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.484

KCNK5

Mlig455_002757 {REF} {Length: 4268} {Pfam: Ion channel [PF07885.18, score=105.3]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=85.9, Expect=3e-19]} {Mouse: ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=87.4, Expect=6e-20]; ENSMUSG00000046410, Kcnk6, potassium inwardly-rectifying channel, subfamily K, member 6, [Score=87.0, Expect=3e-20]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=80.1, Expect=1e-17]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=82.8, Expect=7e-19]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [Score=89.7, Expect=6e-22]} {RNA1310_31805} {RNA815_15556}

Mlig455_063358 {REF} {Length: 4490} {Pfam: Ion channel [PF07885.18, score=104.2]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=88.6, Expect=3e-19]; ENSG00000171303, KCNK3, potassium two pore domain channel subfamily K member 3, [Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=90.1, Expect=5e-20]; ENSMUSG00000046410, Kcnk6, potassium inwardly-rectifying channel, subfamily K, member 6, [Score=87.8, Expect=1e-19]; ENSMUSG00000049265, Kcnk3, potassium channel, subfamily K, member 3, [Score=86.3, Expect=7e-19]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=86.7, Expect=4e-19]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=84.3, Expect=1e-18]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [Score=97.8, Expect=5e-24]} {RNA1310_31805} {RNA815_15556}

Cumulative graph for MligTC455_24173

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.419	2.272	0.38766	1.00000
RegionR2	0.493	2.272	0.63997	0.97784
RegionR3	0.761	2.272	0.43554	0.95294
RegionR4	0.433	2.272	0.67216	0.96823
RegionR5	0.436	2.272	0.63766	0.99014
RegionR6	0.439	2.272	0.65219	1.00000
RegionR7	1.815	2.272	0.06713	0.49780
RegionR8	0.042	2.272	0.86243	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.675	2.272	0.99996	1.00000
RegenerationR2	0.035	2.272	0.95154	1.00000
RegenerationR3	-0.354	2.272	0.59130	0.90398
RegenerationR4	0.699	2.272	0.33197	0.76606
RegenerationR5	-0.644	2.272	0.31475	0.73940
RegenerationR6	0.791	2.272	0.23612	0.58361
RegenerationBL	-5.644	2.272	0.01053	0.10378
RegenerationTP	-1.258	2.272	0.30919	0.75367

Genes with expression patterns similar to MligTC455_24173

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24173	129	2.68	Mlig455_002757, Mlig455_063358	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.484	KCNK5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002757 {REF} {Length: 4268} {Pfam: Ion channel [PF07885.18, score=105.3]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=85.9, Expect=3e-19]} {Mouse: ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=87.4, Expect=6e-20]; ENSMUSG00000046410, Kcnk6, potassium inwardly-rectifying channel, subfamily K, member 6, [Score=87.0, Expect=3e-20]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=80.1, Expect=1e-17]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=82.8, Expect=7e-19]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [Score=89.7, Expect=6e-22]} {RNA1310_31805} {RNA815_15556} Mlig455_063358 {REF} {Length: 4490} {Pfam: Ion channel [PF07885.18, score=104.2]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=88.6, Expect=3e-19]; ENSG00000171303, KCNK3, potassium two pore domain channel subfamily K member 3, [Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=90.1, Expect=5e-20]; ENSMUSG00000046410, Kcnk6, potassium inwardly-rectifying channel, subfamily K, member 6, [Score=87.8, Expect=1e-19]; ENSMUSG00000049265, Kcnk3, potassium channel, subfamily K, member 3, [Score=86.3, Expect=7e-19]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=86.7, Expect=4e-19]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=84.3, Expect=1e-18]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [Score=97.8, Expect=5e-24]} {RNA1310_31805} {RNA815_15556}
2.	MligTC455_23848	99	2.07	Mlig455_012656	Neo: - Age: Down-Down-Up	ANKS1A	1.825	-	0.856	-	-	0.969	-	Mlig455_012656 {REF} {Length: 1973} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=52.3]; SAM domain (Sterile alpha motif) [PF07647.19, score=32.5]; SAM domain (Sterile alpha motif) [PF00536.32, score=30.6]} {Human: ENSG00000064999, ANKS1A, ankyrin repeat and sterile alpha motif domain containing 1A, [Score=121, Expect=1e-28]} {Mouse: ENSMUSG00000024219, Anks1, ankyrin repeat and SAM domain containing 1, [RH, Score=131, Expect=2e-32]} {Dmel: FBgn0039075, CG4393, [Score=90.1, Expect=9e-19]} {RNA1310_16792} {RNA815_16594}
3.	MligTC455_08216	34	0.7	Mlig455_009138	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_009138 {REF} {Length: 379} {NoTransDecoderORF} {RNA1310_66482.1} {RNA815_62564}
4.	MligTC455_23488	260	5.42	Mlig455_006084, Mlig455_006111	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_006084 {REF} {Length: 2438} {TRANSSPLICED} {RNA1509_55206} {RNA1310_12495} {RNA815_795.1} Mlig455_006111 {REF} {Length: 2449} {TRANSSPLICED} {RNA1509_55206} {RNA1310_12495} {RNA815_795.1}
5.	MligTC455_13389	35	0.74	Mlig455_030163	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_030163 {REF} {Length: 3160} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=97.3]} {Smed: dd_Smed_v6_13880_0_1, dd_Smed_v6_13880_0_1, [Score=93.2, Expect=4e-20]} {RNA1310_55606} {RNA815_37627}
6.	MligTC455_16998	650	13.54	Mlig455_061182	Neo: - Age: - Region-enriched R4: 2.023/0.00002	CALM3	0.955	-	-	-	-	0.955	-	Mlig455_061182 {REF} {Length: 1000} {Pfam: EF hand [PF00036.34, score=83.9]; EF-hand domain pair [PF13499.8, score=82.3]; EF-hand domain [PF13405.8, score=70.8]; EF-hand domain pair [PF13833.8, score=64.9]; EF hand [PF13202.8, score=56.3]; EF-hand domain [PF14658.8, score=38.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.3]; OST-HTH/LOTUS domain [PF12872.9, score=18.4]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=163, Expect=8e-52]; ENSG00000198668, CALM1, calmodulin 1, [Score=163, Expect=7e-52]; ENSG00000143933, CALM2, calmodulin 2, [Score=163, Expect=8e-52]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=163, Expect=5e-52]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=5e-52]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=163, Expect=5e-52]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=161, Expect=3e-51]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=2e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=162, Expect=1e-51]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=162, Expect=1e-51]} {RNA1509_34192} {RNA1310_44408} {RNA815_20757}
7.	MligTC455_30783	36	0.76	Mlig455_031044	Neo: - Age: Down-Down-Up	MGAT1	0.95	-	-	-	-	0.950	-	Mlig455_031044 {REF} {Length: 2716} {Pfam: GNT-I family [PF03071.17, score=101.8]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=83.6, Expect=6e-17]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=89.0, Expect=6e-19]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=97.4, Expect=5e-22]} {Celegans: WBGene00001639, gly-14, GLYcosylation related; UDP-N-acetylglucosamine:a-3-D-mannoside b-1,2-N-acetylglucosaminyltransferase I, [Score=91.3, Expect=5e-20]} {Smed: dd_Smed_v6_13024_0_1, dd_Smed_v6_13024_0_1, [Score=89.0, Expect=2e-19]} {RNA1509_50198} {RNA1310_11229} {RNA815_29719}