Data search
Results for MligTC455_24226
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24226 | 1493 | 31.11 | Mlig455_056401 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.384 Region-enriched R5: 1.255/0.01681 |
EIF3J | Mlig455_056401 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: Translation initiation factor eIF3 subunit [PF08597.12, score=167.6]} {Human: ENSG00000104131, EIF3J, eukaryotic translation initiation factor 3 subunit J, [RH, Score=78.2, Expect=2e-16]} {Mouse: ENSMUSG00000027236, Eif3j1, eukaryotic translation initiation factor 3, subunit J1, [RH, Score=76.6, Expect=4e-16]; ENSMUSG00000043424, Eif3j2, eukaryotic translation initiation factor 3, subunit J2, [RH, Score=76.6, Expect=5e-16]} {Dmel: FBgn0027619, eIF3j, eukaryotic translation initiation factor 3 subunit j, [RH, Score=79.3, Expect=2e-17]} {Smed: dd_Smed_v6_930_0_1, dd_Smed_v6_930_0_1, [RH, Score=61.2, Expect=3e-11]} {RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551} {RNA1310_35319, RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551} {RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551, RNA815_17074.1} |
Cumulative graph for MligTC455_24226
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.908 | 5.178 | 0.33562 | 0.98224 | |
| RegionR2 | -1.363 | 5.178 | 0.01624 | 0.13523 | |
| RegionR3 | -0.618 | 5.178 | 0.18260 | 0.71514 | |
| RegionR4 | 1.041 | 5.178 | 0.05163 | 0.19706 | |
| RegionR5 | 1.255 | 5.178 | 0.00191 | 0.01681 | |
| RegionR6 | -0.237 | 5.178 | 0.60232 | 1.00000 | |
| RegionR7 | -0.741 | 5.178 | 0.17199 | 0.76197 | |
| RegionR8 | -0.245 | 5.178 | 0.68752 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.604 | 5.178 | 0.61260 | 1.00000 | |
| RegenerationR2 | 0.223 | 5.178 | 0.67719 | 0.94789 | |
| RegenerationR3 | 0.055 | 5.178 | 0.92442 | 1.00000 | |
| RegenerationR4 | -0.334 | 5.178 | 0.55336 | 0.89370 | |
| RegenerationR5 | -0.702 | 5.178 | 0.18810 | 0.61831 | |
| RegenerationR6 | 0.355 | 5.178 | 0.52688 | 0.82471 | |
| RegenerationBL | 0.023 | 5.178 | 0.96707 | 1.00000 | |
| RegenerationTP | -0.216 | 5.178 | 0.72475 | 1.00000 |
Genes with expression patterns similar to MligTC455_24226
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24226 | 1493 | 31.11 | Mlig455_056401 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.384 Region-enriched R5: 1.255/0.01681 |
EIF3J | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056401 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: Translation initiation factor eIF3 subunit [PF08597.12, score=167.6]} {Human: ENSG00000104131, EIF3J, eukaryotic translation initiation factor 3 subunit J, [RH, Score=78.2, Expect=2e-16]} {Mouse: ENSMUSG00000027236, Eif3j1, eukaryotic translation initiation factor 3, subunit J1, [RH, Score=76.6, Expect=4e-16]; ENSMUSG00000043424, Eif3j2, eukaryotic translation initiation factor 3, subunit J2, [RH, Score=76.6, Expect=5e-16]} {Dmel: FBgn0027619, eIF3j, eukaryotic translation initiation factor 3 subunit j, [RH, Score=79.3, Expect=2e-17]} {Smed: dd_Smed_v6_930_0_1, dd_Smed_v6_930_0_1, [RH, Score=61.2, Expect=3e-11]} {RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551} {RNA1310_35319, RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551} {RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551, RNA815_17074.1} |
| 2. | MligTC455_25441 | 385 | 8.03 | Mlig455_006325 | Neo: - Age: - Region-enriched R5: 1.674/0.02779 |
PHAX | 3.264 | - | 0.879 | - | 0.711 | 0.723 | 0.951 | Mlig455_006325 {REF} {Length: 1723} {TRANSSPLICED} {Pfam: PHAX RNA-binding domain [PF10258.11, score=82.3]} {Human: ENSG00000164902, PHAX, phosphorylated adaptor for RNA export, [RH, Score=80.1, Expect=7e-16]} {Mouse: ENSMUSG00000008301, Phax, phosphorylated adaptor for RNA export, [RH, Score=86.7, Expect=2e-18]} {Dmel: FBgn0033380, Phax, Phosphorylated adaptor for RNA export, [RH, Score=78.6, Expect=1e-15]} {Celegans: WBGene00022192, Y71H2B.2, [RH, Score=66.2, Expect=7e-12]} {Smed: dd_Smed_v6_11764_0_1, dd_Smed_v6_11764_0_1, [RH, Score=68.2, Expect=1e-12]} {RNA1509_45268, RNA1509_52385} {RNA1310_20984, RNA1509_45268, RNA1509_52385} {RNA1509_45268, RNA1509_52385, RNA815_8657.1} |
| 3. | MligTC455_19849 | 803 | 16.74 | Mlig455_001790 | Neo: - Age: - |
2.642 | - | 0.960 | - | - | 0.820 | 0.862 | Mlig455_001790 {REF} {Length: 3366} {TRANSSPLICED} {Pfam: Peptidase family M3 [PF01432.22, score=55.7]} {RNA1509_4620} {RNA1310_8121, RNA1509_4620} {RNA1509_4620, RNA815_2560.1} | |
| 4. | MligTC455_42049 | 1887 | 39.32 | Mlig455_027189, Mlig455_030708 | Neo: - Age: - Region-enriched R4: 1.193/0.00320 |
1.901 | - | - | - | 0.956 | - | 0.945 | Mlig455_027189 {REF} {Length: 1388} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=18.4]} {RNA1509_40462} {RNA1310_19777} {RNA815_7846} Mlig455_030708 {REF} {Length: 1383} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=18.6]} {RNA1509_40462, RNA1509_54491, RNA1509_54789} {RNA1310_19777, RNA1509_40462, RNA1509_54491, RNA1509_54789} {RNA1509_40462, RNA1509_54491, RNA1509_54789, RNA815_7846} |
|
| 5. | MligTC455_45361 | 1171 | 24.39 | Mlig455_048928 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.508/0.00070 |
SCO1 | 1.864 | - | 0.953 | - | - | - | 0.911 | Mlig455_048928 {REF} {Length: 1064} {TRANSSPLICED} {Pfam: SCO1/SenC [PF02630.16, score=147.3]; AhpC/TSA family [PF00578.23, score=22.3]} {Human: ENSG00000133028, SCO1, SCO1, cytochrome c oxidase assembly protein, [RH, Score=185, Expect=2e-56]} {Mouse: ENSMUSG00000069844, Sco1, SCO1 cytochrome c oxidase assembly protein, [RH, Score=192, Expect=6e-60]} {Dmel: FBgn0262467, Scox, Synthesis of cytochrome c oxidase, [RH, Score=177, Expect=3e-54]} {Celegans: WBGene00015297, sco-1, SCO (Yeast Suppressor of Cytochrome Oxidase deficiency) homolog, [RH, Score=186, Expect=2e-57]} {Smed: dd_Smed_v6_2747_0_1, dd_Smed_v6_2747_0_1, [RH, Score=206, Expect=4e-66]} {RNA1509_10939, RNA1509_36634} {RNA1310_31267, RNA1509_10939, RNA1509_36634} {RNA1509_10939, RNA1509_36634, RNA815_17642} |
| 6. | MligTC455_21686 | 377 | 7.85 | Mlig455_016616 | Neo: - Age: Down-Up-Up |
1.779 | - | - | - | - | 0.954 | 0.825 | Mlig455_016616 {REF} {Length: 1395} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13428.8, score=30.2]; Tetratricopeptide repeat [PF07719.19, score=25.3]} {Smed: dd_Smed_v6_438_0_1, dd_Smed_v6_438_0_1, [RH, Score=104, Expect=4e-25]} {RNA1509_14239} {RNA1310_24039.2} {RNA815_28568} | |
| 7. | MligTC455_39776 | 1144 | 23.84 | Mlig455_053212, Mlig455_065058 | Neo: Neoblast, stringent Age: - Region-specific R5: 2.245 Region-enriched R5: 1.733/0.00000 |
PLK1 | 1.732 | - | 0.950 | - | - | - | 0.782 | Mlig455_053212 {REF} {Length: 3361} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=146.5]; POLO box duplicated region [PF00659.20, score=127.0]; Kinase-like [PF14531.8, score=33.4]; Fungal protein kinase [PF17667.3, score=30.6]} {Human: ENSG00000166851, PLK1, polo like kinase 1, [RH, Score=594, Expect=0.0]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [RH, Score=614, Expect=0.0]} {Dmel: FBgn0003124, polo, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00004043, plk-2, Serine/threonine-protein kinase plk-2, [RH, Score=561, Expect=0.0]} {Smed: dd_Smed_v6_4273_0_1, dd_Smed_v6_4273_0_1, [RH, Score=500, Expect=2e-171]} {RNA1509_5301} {RNA1310_3713} {RNA815_3603} Mlig455_065058 {REF} {Length: 3509} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=146.5]; POLO box duplicated region [PF00659.20, score=126.5]; Kinase-like [PF14531.8, score=33.4]; Fungal protein kinase [PF17667.3, score=30.6]} {Human: ENSG00000166851, PLK1, polo like kinase 1, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [RH, Score=612, Expect=0.0]} {Dmel: FBgn0003124, polo, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00004043, plk-2, Serine/threonine-protein kinase plk-2, [RH, Score=561, Expect=0.0]} {Smed: dd_Smed_v6_4273_0_1, dd_Smed_v6_4273_0_1, [RH, Score=499, Expect=3e-171]} {RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301} {RNA1310_3713, RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301} {RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301, RNA815_3603} |
| 8. | MligTC455_22407 | 642 | 13.38 | Mlig455_020302 | Neo: - Age: - |
MAN1B1 | 1.708 | - | - | - | 0.953 | - | 0.755 | Mlig455_020302 {REF} {Length: 4794} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=514.8]} {Human: ENSG00000177239, MAN1B1, mannosidase alpha class 1B member 1, [RH, Score=518, Expect=1e-168]} {Mouse: ENSMUSG00000036646, Man1b1, mannosidase, alpha, class 1B, member 1, [RH, Score=530, Expect=5e-174]} {Dmel: FBgn0039634, alpha-Man-Ib, alpha-Mannosidase class I b, [RH, Score=484, Expect=2e-156]} {Celegans: WBGene00020197, mans-3, alpha-1,2-Mannosidase, [RH, Score=459, Expect=2e-148]} {Smed: dd_Smed_v6_7032_0_1, dd_Smed_v6_7032_0_1, [RH, Score=521, Expect=4e-172]} {RNA1509_10584} {RNA1310_11173} {RNA815_9464} |
| 9. | MligTC455_33060 | 100 | 2.08 | Mlig455_045901 | Neo: Germline Age: Up-Down-Up Region-enriched R5: 3.781/0.00002 |
1.703 | - | 0.959 | - | - | - | 0.744 | Mlig455_045901 {REF} {Length: 2137} {Pfam: Immunoglobulin domain [PF13927.8, score=49.5]; Immunoglobulin domain [PF13895.8, score=47.1]; Immunoglobulin I-set domain [PF07679.18, score=41.6]; Immunoglobulin V-set domain [PF07686.19, score=29.8]; Immunoglobulin domain [PF00047.27, score=27.2]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=53.1, Expect=7e-07]} {Smed: dd_Smed_v6_2673_0_1, dd_Smed_v6_2673_0_1, [Score=50.4, Expect=3e-06]} {RNA1509_12903} {RNA1310_11861, RNA1509_12903} {RNA1509_12903, RNA815_4505} | |
| 10. | MligTC455_48161 | 1255 | 26.14 | Mlig455_012088 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.327 Region-enriched R5: 1.261/0.00011 |
MAPRE3 | 1.702 | - | - | - | 0.751 | - | 0.951 | Mlig455_012088 {REF} {Length: 2891} {TRANSSPLICED} {Pfam: EB1-like C-terminal motif [PF03271.19, score=50.2]; Calponin homology (CH) domain [PF00307.33, score=46.7]} {Human: ENSG00000084764, MAPRE3, microtubule associated protein RP/EB family member 3, [RH, Score=260, Expect=6e-86]} {Mouse: ENSMUSG00000029166, Mapre3, microtubule-associated protein, RP/EB family, member 3, [RH, Score=259, Expect=7e-86]} {Dmel: FBgn0027066, Eb1, [RH, Score=281, Expect=2e-94]} {Celegans: WBGene00013344, ebp-1, Microtubule End Binding Protein, [RH, Score=239, Expect=2e-77]} {Smed: dd_Smed_v6_1322_0_2, dd_Smed_v6_1322_0_2, [RH, Score=323, Expect=7e-111]} {RNA1509_25290, RNA1509_32633, RNA1509_55630, RNA1509_5689} {RNA1310_26169.1, RNA1509_25290, RNA1509_32633, RNA1509_55630} {RNA1509_25290, RNA1509_32633, RNA1509_55630, RNA815_7966.2} |
| 11. | MligTC455_54083 | 975 | 20.32 | Mlig455_066848 | Neo: Irradiation Age: logFC(26M/2M)=0.602 Region-enriched R5: 1.847/0.00008 |
GFI1 | 1.689 | - | 0.960 | - | - | - | 0.729 | Mlig455_066848 {REF} {Length: 2798} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=31.3]; C2H2-type zinc finger [PF13894.8, score=27.0]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=22.2]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=79.7, Expect=2e-15]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=78.2, Expect=2e-15]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=81.3, Expect=6e-16]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=78.2, Expect=3e-15]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=85.9, Expect=2e-17]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=80.5, Expect=2e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=183, Expect=1e-51]} {RNA1509_4057} {RNA1310_7337} {RNA815_12480} |
| 12. | MligTC455_12594 | 160 | 3.32 | Mlig455_065680 | Neo: - Age: - Region-specific R5: 4.672 Region-enriched R5: 3.553/0.00000 |
TMPRSS6 | 1.678 | - | 0.954 | - | - | 0.724 | - | Mlig455_065680 {REF} {Length: 2657} {Pfam: Trypsin [PF00089.28, score=246.4]; Low-density lipoprotein receptor domain class A [PF00057.20, score=65.1]; CUB domain [PF00431.22, score=65.0]; Trypsin-like peptidase domain [PF13365.8, score=29.0]; Domain of unknown function (DUF1986) [PF09342.13, score=24.6]} {Human: ENSG00000187045, TMPRSS6, transmembrane serine protease 6, [Score=223, Expect=1e-63]} {Mouse: ENSMUSG00000016942, Tmprss6, transmembrane serine protease 6, [RH, Score=225, Expect=8e-65]} {Dmel: FBgn0042098, CG18735, [RH, Score=185, Expect=2e-53]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [RH, Score=165, Expect=7e-47]} {Smed: dd_Smed_v6_790_0_1, dd_Smed_v6_790_0_1, [Score=179, Expect=3e-48]} {RNA1509_27528, RNA1509_47790} {RNA1310_12212.1, RNA1509_47790} {RNA1509_47790, RNA815_13365} |
| 13. | MligTC455_42084 | 1828 | 38.07 | Mlig455_001444 | Neo: Int S/G2/M Age: - |
ETF1 | 1.677 | - | 0.723 | - | 0.954 | - | - | Mlig455_001444 {REF} {Length: 3397} {TRANSSPLICED} {Pfam: eRF1 domain 2 [PF03464.17, score=158.3]; eRF1 domain 3 [PF03465.17, score=129.0]; eRF1 domain 1 [PF03463.17, score=51.5]; Bacterial archaeo-eukaryotic release factor family 10 [PF18854.3, score=34.5]; Actinobacteria/chloroflexi VLRF1 release factor [PF18859.3, score=32.8]} {Human: ENSG00000120705, ETF1, eukaryotic translation termination factor 1, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000024360, Etf1, eukaryotic translation termination factor 1, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0036974, eRF1, eukaryotic translation release factor 1, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00020269, erfa-1, Eukaryotic peptide chain release factor subunit 1, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_5017_0_1, dd_Smed_v6_5017_0_1, [RH, Score=673, Expect=0.0]} {RNA1509_1928, RNA1509_30112} {RNA1310_2584.2, RNA1509_1928, RNA1509_30112} {RNA1509_1928, RNA1509_30112, RNA815_1129.1} |
| 14. | MligTC455_19223 | 419 | 8.73 | Mlig455_036573 | Neo: - Age: - Region-enriched R5: 3.465/0.00000 |
0.965 | - | 0.965 | - | - | - | - | Mlig455_036573 {REF} {Length: 541} {NoTransDecoderORF} {RNA1509_39234} {RNA1310_8765} {RNA815_981.2} | |
| 15. | MligTC455_41196 | 1517 | 31.6 | Mlig455_069276 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.648 Regeneration-enriched BL: 1.648 |
MRPS16 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_069276 {REF} {Length: 1370} {TRANSSPLICED} {Pfam: Ribosomal protein S16 [PF00886.21, score=47.9]} {Human: ENSG00000182180, MRPS16, mitochondrial ribosomal protein S16, [RH, Score=87.0, Expect=2e-22]} {Mouse: ENSMUSG00000049960, Mrps16, mitochondrial ribosomal protein S16, [RH, Score=82.8, Expect=8e-21]} {Dmel: FBgn0033907, mRpS16, mitochondrial ribosomal protein S16, [RH, Score=85.9, Expect=3e-22]} {Celegans: WBGene00018961, mrps-16, Probable 28S ribosomal protein S16, mitochondrial, [RH, Score=66.6, Expect=1e-14]} {Smed: dd_Smed_v6_1539_0_1, dd_Smed_v6_1539_0_1, [RH, Score=129, Expect=7e-39]} {RNA1509_24123, RNA1509_27278, RNA1509_29001, RNA1509_35030, RNA1509_42734, RNA1509_53690} {RNA1310_30341.1, RNA1509_24123, RNA1509_27278, RNA1509_29001, RNA1509_35030, RNA1509_42734, RNA1509_53690} {RNA1509_24123, RNA1509_27278, RNA1509_29001, RNA1509_35030, RNA1509_42734, RNA1509_53690, RNA815_45576} |
| 16. | MligTC455_02982 | 496 | 10.34 | Mlig455_021516 | Neo: Int S/G2/M Age: Down-Up-Up |
MRPL55 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_021516 {REF} {Length: 892} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L55 [PF09776.11, score=84.4]} {Human: ENSG00000162910, MRPL55, mitochondrial ribosomal protein L55, [RH, Score=63.2, Expect=3e-13]} {Mouse: ENSMUSG00000036860, Mrpl55, mitochondrial ribosomal protein L55, [RH, Score=62.8, Expect=2e-13]} {Dmel: FBgn0038678, mRpL55, mitochondrial ribosomal protein L55, [RH, Score=68.2, Expect=8e-16]} {Celegans: WBGene00022045, mrpl-55, Mitochondrial Ribosomal Protein, Large, [RH, Score=69.7, Expect=3e-16]} {Smed: dd_Smed_v6_4982_0_1, dd_Smed_v6_4982_0_1, [RH, Score=54.7, Expect=1e-10]} {RNA1509_8283} {RNA1310_15061} {RNA815_18521} |
| 17. | MligTC455_34266 | 298 | 6.2 | Mlig455_000718 | Neo: Neoblast, stringent Age: Down-Up-Down Region-enriched R5: 3.400/0.00000 |
SEL1L | 0.96 | - | 0.960 | - | - | - | - | Mlig455_000718 {REF} {Length: 3660} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=93.6]; MYND finger [PF01753.20, score=38.5]; Tetratricopeptide repeat [PF00515.30, score=36.0]; Tetratricopeptide repeat [PF07719.19, score=33.5]; Tetratricopeptide repeat [PF13432.8, score=28.8]; Tetratricopeptide repeat [PF13424.8, score=28.0]; Tetratricopeptide repeat [PF13181.8, score=26.2]} {Human: ENSG00000071537, SEL1L, SEL1L, ERAD E3 ligase adaptor subunit, [Score=72.8, Expect=2e-12]} {Mouse: ENSMUSG00000020964, Sel1l, sel-1 suppressor of lin-12-like (C. elegans), [Score=72.4, Expect=2e-12]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [Score=65.1, Expect=2e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=49.3, Expect=1e-05]} {Smed: dd_Smed_v6_3464_0_2, dd_Smed_v6_3464_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_34954, RNA1509_44136, RNA1509_52557, RNA1509_57871} {RNA1310_2863.2, RNA1509_34954, RNA1509_44136, RNA1509_57871} {RNA1509_34954, RNA1509_44136, RNA1509_57871, RNA815_1704} |
| 18. | MligTC455_42556 | 670 | 13.96 | Mlig455_011300, Mlig455_011389 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.899/0.01992 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_011300 {REF} {Length: 1287} {TRANSSPLICED} {Pfam: TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=21.1]} {Smed: dd_Smed_v6_6947_0_1, dd_Smed_v6_6947_0_1, [RH, Score=148, Expect=2e-41]} {RNA1509_30949} {RNA1310_27002} {RNA815_32319} Mlig455_011389 {REF} {Length: 1294} {TRANSSPLICED} {Pfam: TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=21.1]} {Smed: dd_Smed_v6_6947_0_1, dd_Smed_v6_6947_0_1, [RH, Score=148, Expect=2e-41]} {RNA1509_30949} {RNA1310_27002, RNA1509_30949} {RNA1509_30949, RNA815_32319} |
|
| 19. | MligTC455_45083 | 956 | 19.92 | Mlig455_065154 | Neo: - Age: - |
PQLC1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_065154 {REF} {Length: 2802} {Pfam: PQ loop repeat [PF04193.16, score=72.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000122490, PQLC1, PQ loop repeat containing 1, [Score=199, Expect=2e-59]} {Mouse: ENSMUSG00000034006, Pqlc1, PQ loop repeat containing 1, [Score=192, Expect=4e-57]} {Dmel: FBgn0031897, CG13784, [Score=213, Expect=7e-65]} {Celegans: WBGene00011827, T19A6.1, [Score=170, Expect=8e-49]} {Smed: dd_Smed_v6_6419_0_1, dd_Smed_v6_6419_0_1, [Score=180, Expect=3e-53]} {RNA1509_32486} {RNA1310_19086.1} {RNA815_10336.1} |
| 20. | MligTC455_46607 | 2454 | 51.13 | Mlig455_011891 | Neo: - |
TXNDC17 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_011891 {REF} {Length: 1257} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF953) [PF06110.13, score=102.3]; Thioredoxin [PF00085.22, score=26.4]} {Human: ENSG00000129235, TXNDC17, thioredoxin domain containing 17, [RH, Score=69.3, Expect=8e-16]} {Mouse: ENSMUSG00000020803, Txndc17, thioredoxin domain containing 17, [RH, Score=73.6, Expect=1e-17]} {Dmel: FBgn0000318, cl, clot, [RH, Score=73.6, Expect=1e-17]} {Celegans: WBGene00022188, Y71H2AR.1, [RH, Score=59.7, Expect=2e-12]} {Smed: dd_Smed_v6_2482_0_1, dd_Smed_v6_2482_0_1, [RH, Score=88.2, Expect=1e-23]} {RNA1509_8547} {RNA1310_27459} {RNA815_11946.1} |
| 21. | MligTC455_51590 | 320 | 6.67 | Mlig455_044222 | Neo: - Age: logFC(26M/2M)=0.392 |
PARS2 | 0.955 | - | 0.955 | - | - | - | - | Mlig455_044222 {REF} {Length: 2181} {TRANSSPLICED} {Pfam: tRNA synthetase class II core domain (G, H, P, S and T) [PF00587.27, score=104.4]} {Human: ENSG00000162396, PARS2, prolyl-tRNA synthetase 2, mitochondrial, [RH, Score=267, Expect=9e-84]} {Mouse: ENSMUSG00000043572, Pars2, prolyl-tRNA synthetase (mitochondrial)(putative), [RH, Score=267, Expect=7e-84]} {Dmel: FBgn0027082, ProRS-m, Prolyl-tRNA synthetase, mitochondrial, [RH, Score=263, Expect=1e-82]} {Celegans: WBGene00004190, pars-2, Prolyl Amino-acyl tRNA Synthetase, [RH, Score=230, Expect=3e-70]} {Smed: dd_Smed_v6_12333_0_1, dd_Smed_v6_12333_0_1, [RH, Score=298, Expect=1e-96]} {RNA1509_2645, RNA1509_54847} {RNA1310_14961.1, RNA1509_2645, RNA1509_54847} {RNA1509_2645, RNA1509_54847, RNA815_4246} |
| 22. | MligTC455_07531 | 381 | 7.95 | Mlig455_058950 | Neo: - Age: Down-Up-Down |
TSEN34 | 0.953 | - | 0.953 | - | - | - | - | Mlig455_058950 {REF} {Length: 2609} {Pfam: tRNA intron endonuclease, catalytic C-terminal domain [PF01974.19, score=47.1]} {Human: ENSG00000278605, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000278622, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000170892, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000273896, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274796, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274129, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274672, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000278712, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274078, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000275165, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]} {Mouse: ENSMUSG00000035585, Tsen34, tRNA splicing endonuclease subunit 34, [Score=70.1, Expect=3e-13]} {Dmel: FBgn0053260, CG33260, [RH, Score=67.8, Expect=9e-13]} {Smed: dd_Smed_v6_4610_1_4, dd_Smed_v6_4610_1_4, [Score=72.4, Expect=2e-14]} {RNA1509_35637} {RNA1310_8022.1, RNA1509_35637} {RNA1509_35637, RNA815_9502.1} |
| 23. | MligTC455_33782 | 923 | 19.23 | Mlig455_016500 | Neo: Int S/G2/M Age: - |
ZSCAN20 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_016500 {REF} {Length: 2318} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=50.3]; C2H2-type zinc finger [PF13894.8, score=46.0]; Zinc finger, C2H2 type [PF00096.28, score=44.9]; Zinc-finger of C2H2 type [PF12874.9, score=27.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.2]} {Human: ENSG00000121903, ZSCAN20, zinc finger and SCAN domain containing 20, [Score=108, Expect=1e-25]; ENSG00000197951, ZNF71, zinc finger protein 71, [Score=103, Expect=4e-24]} {Mouse: ENSMUSG00000057101, Zfp180, zinc finger protein 180, [Score=104, Expect=2e-24]; ENSMUSG00000020491, 2810021J22Rik, RIKEN cDNA 2810021J22 gene, [Score=101, Expect=1e-23]; ENSMUSG00000050605, Zfp61, zinc finger protein 61, [Score=100, Expect=2e-23]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=100, Expect=3e-23]; ENSMUSG00000052675, Zfp112, zinc finger protein 112, [Score=99.0, Expect=1e-22]} {Dmel: FBgn0028878, CG15269, [Score=90.5, Expect=6e-20]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=84.7, Expect=1e-18]} {Smed: dd_Smed_v6_9867_0_1, dd_Smed_v6_9867_0_1, [Score=85.1, Expect=1e-18]} {RNA1509_56583} {RNA1310_45418.1} {RNA815_18422.2} |
| 24. | MligTC455_48911 | 191 | 3.98 | Mlig455_001428 | Neo: - Age: - Region-enriched R5: 4.632/0.00000 Regeneration-upregulated TP: 7.724 Regeneration-enriched TP: 7.724 |
0.951 | - | 0.951 | - | - | - | - | Mlig455_001428 {REF} {Length: 4130} {Smed: dd_Smed_v6_5949_0_1, dd_Smed_v6_5949_0_1, [RH, Score=51.2, Expect=6e-07]} {RNA1509_38969} {RNA1310_13197, RNA1509_38969} {RNA1509_38969, RNA815_32465} | |
| 25. | MligTC455_23884 | 1234 | 25.71 | Mlig455_013909, Mlig455_050505 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.354 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_013909 {REF} {Length: 999} {TRANSSPLICED} {RNA1509_27549, RNA1509_6154} {RNA1310_41822, RNA1509_27549} {RNA1509_27549, RNA815_26185} Mlig455_050505 {REF} {Length: 999} {TRANSSPLICED} {RNA1509_6154} {RNA1310_41822} {RNA815_26185} |
|
| 26. | MligTC455_39936 | 484 | 10.09 | Mlig455_039429, Mlig455_070684 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.757/0.00506 |
DDX20 | 0.95 | - | 0.950 | - | - | - | - | Mlig455_039429 {REF} {Length: 2551} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=106.1]; Helicase conserved C-terminal domain [PF00271.33, score=85.5]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=19.6]} {Human: ENSG00000064703, DDX20, DEAD-box helicase 20, [RH, Score=374, Expect=3e-117]} {Mouse: ENSMUSG00000027905, Ddx20, DEAD (Asp-Glu-Ala-Asp) box polypeptide 20, [RH, Score=363, Expect=3e-113]} {Dmel: FBgn0011802, Gem3, Gemin3, [RH, Score=256, Expect=2e-72]} {Celegans: WBGene00020284, mel-46, MEL-46, [RH, Score=251, Expect=7e-71]} {Smed: dd_Smed_v6_6961_0_1, dd_Smed_v6_6961_0_1, [RH, Score=240, Expect=2e-73]} {RNA1509_34619} {RNA1310_8550} {RNA815_23867} Mlig455_070684 {REF} {Length: 2391} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=106.3]; Helicase conserved C-terminal domain [PF00271.33, score=85.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=20.2]} {Human: ENSG00000064703, DDX20, DEAD-box helicase 20, [RH, Score=372, Expect=4e-117]} {Mouse: ENSMUSG00000027905, Ddx20, DEAD (Asp-Glu-Ala-Asp) box polypeptide 20, [RH, Score=362, Expect=4e-113]} {Dmel: FBgn0011802, Gem3, Gemin3, [RH, Score=255, Expect=1e-72]} {Celegans: WBGene00020284, mel-46, MEL-46, [RH, Score=249, Expect=8e-71]} {Smed: dd_Smed_v6_6961_0_1, dd_Smed_v6_6961_0_1, [RH, Score=239, Expect=3e-73]} {RNA1509_34619} {RNA1310_8550} {RNA815_23867} |
| 27. | MligTC455_41406 | 411 | 8.56 | Mlig455_003675 | Neo: - Age: - |
PIK3R4 | 0.95 | - | 0.950 | - | - | - | - | Mlig455_003675 {REF} {Length: 5356} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=47.6]; Protein kinase domain [PF00069.27, score=47.0]; WD domain, G-beta repeat [PF00400.34, score=34.5]; HEAT repeats [PF13646.8, score=32.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=26.4]; HEAT-like repeat [PF13513.8, score=23.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=20.7]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=20.6]} {Human: ENSG00000196455, PIK3R4, phosphoinositide-3-kinase regulatory subunit 4, [Score=656, Expect=0.0]} {Mouse: ENSMUSG00000032571, Pik3r4, phosphoinositide-3-kinase regulatory subunit 4, [Score=646, Expect=0.0]} {Dmel: FBgn0260935, Vps15, Vacuolar protein sorting 15, [RH, Score=581, Expect=0.0]} {Celegans: WBGene00014151, vps-15, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=275, Expect=4e-75]} {Smed: dd_Smed_v6_6060_0_1, dd_Smed_v6_6060_0_1, [RH, Score=330, Expect=6e-93]} {RNA1509_5482} {RNA1310_999} {RNA815_1679.1} |
| 28. | MligTC455_46565 | 601 | 12.51 | Mlig455_059227 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.582 Region-enriched R5: 1.261/0.00175 |
GTPBP6 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_059227 {REF} {Length: 1547} {TRANSSPLICED} {Pfam: 50S ribosome-binding GTPase [PF01926.25, score=45.0]; GTP-binding GTPase N-terminal [PF13167.8, score=37.5]} {Human: ENSG00000178605, GTPBP6, GTP binding protein 6 (putative), [RH, Score=201, Expect=2e-58]} {Mouse: ENSMUSG00000033434, Gtpbp6, GTP binding protein 6 (putative), [RH, Score=176, Expect=3e-49]} {Dmel: FBgn0039339, CG5116, [RH, Score=194, Expect=3e-56]} {Celegans: WBGene00009769, F46B6.4, [RH, Score=202, Expect=1e-59]} {Smed: dd_Smed_v6_13896_0_1, dd_Smed_v6_13896_0_1, [RH, Score=236, Expect=3e-72]} {RNA1509_50612} {RNA1310_21595, RNA1509_50612} {RNA1509_50612, RNA815_16007} |
Berezikov Lab - 2020-2021 © ERIBA