Data search
Results for MligTC455_46565
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46565 | 601 | 12.51 | Mlig455_059227 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.582 Region-enriched R5: 1.261/0.00175 |
GTPBP6 | Mlig455_059227 {REF} {Length: 1547} {TRANSSPLICED} {Pfam: 50S ribosome-binding GTPase [PF01926.25, score=45.0]; GTP-binding GTPase N-terminal [PF13167.8, score=37.5]} {Human: ENSG00000178605, GTPBP6, GTP binding protein 6 (putative), [RH, Score=201, Expect=2e-58]} {Mouse: ENSMUSG00000033434, Gtpbp6, GTP binding protein 6 (putative), [RH, Score=176, Expect=3e-49]} {Dmel: FBgn0039339, CG5116, [RH, Score=194, Expect=3e-56]} {Celegans: WBGene00009769, F46B6.4, [RH, Score=202, Expect=1e-59]} {Smed: dd_Smed_v6_13896_0_1, dd_Smed_v6_13896_0_1, [RH, Score=236, Expect=3e-72]} {RNA1509_50612} {RNA1310_21595, RNA1509_50612} {RNA1509_50612, RNA815_16007} |
Cumulative graph for MligTC455_46565
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.723 | 4.078 | 0.52937 | 1.00000 | |
| RegionR2 | 0.238 | 4.078 | 0.64793 | 0.98366 | |
| RegionR3 | 0.367 | 4.078 | 0.35661 | 0.89178 | |
| RegionR4 | -0.425 | 4.078 | 0.33965 | 0.65933 | |
| RegionR5 | 1.261 | 4.078 | 0.00011 | 0.00175 | |
| RegionR6 | 0.535 | 4.078 | 0.17679 | 0.73883 | |
| RegionR7 | -0.794 | 4.078 | 0.23404 | 0.85832 | |
| RegionR8 | -0.458 | 4.078 | 0.58658 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.368 | 4.078 | 0.81424 | 1.00000 | |
| RegenerationR2 | 0.189 | 4.078 | 0.63608 | 0.92984 | |
| RegenerationR3 | 0.05 | 4.078 | 0.90669 | 1.00000 | |
| RegenerationR4 | 0.482 | 4.078 | 0.24619 | 0.69423 | |
| RegenerationR5 | -0.402 | 4.078 | 0.25520 | 0.68797 | |
| RegenerationR6 | 0.206 | 4.078 | 0.62045 | 0.88112 | |
| RegenerationBL | 0.672 | 4.078 | 0.23738 | 0.59084 | |
| RegenerationTP | 0.274 | 4.078 | 0.70475 | 1.00000 |
Genes with expression patterns similar to MligTC455_46565
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46565 | 601 | 12.51 | Mlig455_059227 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.582 Region-enriched R5: 1.261/0.00175 |
GTPBP6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059227 {REF} {Length: 1547} {TRANSSPLICED} {Pfam: 50S ribosome-binding GTPase [PF01926.25, score=45.0]; GTP-binding GTPase N-terminal [PF13167.8, score=37.5]} {Human: ENSG00000178605, GTPBP6, GTP binding protein 6 (putative), [RH, Score=201, Expect=2e-58]} {Mouse: ENSMUSG00000033434, Gtpbp6, GTP binding protein 6 (putative), [RH, Score=176, Expect=3e-49]} {Dmel: FBgn0039339, CG5116, [RH, Score=194, Expect=3e-56]} {Celegans: WBGene00009769, F46B6.4, [RH, Score=202, Expect=1e-59]} {Smed: dd_Smed_v6_13896_0_1, dd_Smed_v6_13896_0_1, [RH, Score=236, Expect=3e-72]} {RNA1509_50612} {RNA1310_21595, RNA1509_50612} {RNA1509_50612, RNA815_16007} |
| 2. | MligTC455_21852 | 452 | 9.41 | Mlig455_070888 | Neo: - Age: Down-Up-Down |
ALAD | 2.529 | - | - | 0.811 | - | 0.749 | 0.969 | Mlig455_070888 {REF} {Length: 1219} {TRANSSPLICED} {Pfam: Delta-aminolevulinic acid dehydratase [PF00490.23, score=389.9]} {Human: ENSG00000148218, ALAD, aminolevulinate dehydratase, [RH, Score=377, Expect=8e-131]} {Mouse: ENSMUSG00000028393, Alad, aminolevulinate, delta-, dehydratase, [RH, Score=369, Expect=7e-128]} {Dmel: FBgn0036271, Pbgs, Porphobilinogen synthase, [RH, Score=329, Expect=2e-112]} {Smed: dd_Smed_v6_6364_0_1, dd_Smed_v6_6364_0_1, [RH, Score=365, Expect=1e-126]} {RNA1509_20362, RNA1509_45703} {RNA1310_26908, RNA1509_20362, RNA1509_45703} {RNA1509_20362, RNA1509_45703, RNA815_12467} |
| 3. | MligTC455_54063 | 859 | 17.9 | Mlig455_056400 | Neo: - Age: logFC(26M/2M)=0.402 |
MRPL38 | 1.801 | - | - | - | 0.825 | 0.976 | - | Mlig455_056400 {REF} {Length: 1562} {TRANSSPLICED} {Pfam: Phosphatidylethanolamine-binding protein [PF01161.22, score=42.9]} {Human: ENSG00000204316, MRPL38, mitochondrial ribosomal protein L38, [RH, Score=177, Expect=4e-51]} {Mouse: ENSMUSG00000020775, Mrpl38, mitochondrial ribosomal protein L38, [RH, Score=179, Expect=4e-52]} {Dmel: FBgn0030552, mRpL38, mitochondrial ribosomal protein L38, [RH, Score=213, Expect=6e-65]} {Celegans: WBGene00021327, mrpl-38, Mitochondrial Ribosomal Protein, Large, [RH, Score=144, Expect=4e-39]} {Smed: dd_Smed_v6_3715_0_1, dd_Smed_v6_3715_0_1, [RH, Score=245, Expect=2e-77]} {RNA1509_10159, RNA1509_23235} {RNA1310_21525.1, RNA1509_10159, RNA1509_23235} {RNA1509_10159, RNA1509_23235, RNA815_8716} |
| 4. | MligTC455_54062 | 861 | 17.93 | Mlig455_040984 | Neo: - Age: Down-Down-Up |
MRPL38 | 1.8 | - | - | - | 0.828 | 0.972 | - | Mlig455_040984 {REF} {Length: 1628} {Pfam: Phosphatidylethanolamine-binding protein [PF01161.22, score=42.4]} {Human: ENSG00000204316, MRPL38, mitochondrial ribosomal protein L38, [RH, Score=177, Expect=3e-51]} {Mouse: ENSMUSG00000020775, Mrpl38, mitochondrial ribosomal protein L38, [RH, Score=178, Expect=9e-52]} {Dmel: FBgn0030552, mRpL38, mitochondrial ribosomal protein L38, [RH, Score=211, Expect=6e-64]} {Celegans: WBGene00021327, mrpl-38, Mitochondrial Ribosomal Protein, Large, [RH, Score=144, Expect=8e-39]} {Smed: dd_Smed_v6_3715_0_1, dd_Smed_v6_3715_0_1, [RH, Score=244, Expect=6e-77]} {RNA1509_10159} {RNA1310_21525.1} {RNA815_8716} |
| 5. | MligTC455_53624 | 1813 | 37.76 | Mlig455_008467, Mlig455_009918 | Neo: - Age: logFC(26M/2M)=0.449 Region-enriched R5: 1.585/0.00006 |
1.776 | - | - | 0.817 | - | - | 0.959 | Mlig455_008467 {REF} {Length: 838} {TRANSSPLICED} {Pfam: 3' exoribonuclease family, domain 1 [PF01138.23, score=32.5]} {RNA1509_17896} {RNA1310_42888.1} {RNA815_22192} Mlig455_009918 {REF} {Length: 840} {TRANSSPLICED} {Pfam: 3' exoribonuclease family, domain 1 [PF01138.23, score=32.5]} {RNA1509_17896} {RNA1310_42888.1, RNA1509_17896} {RNA1509_17896, RNA815_22192} |
|
| 6. | MligTC455_18896 | 1136 | 23.67 | Mlig455_057881 | Neo: Irradiation Age: Down-Up-Up |
DDX52 | 1.75 | - | - | - | - | 0.794 | 0.956 | Mlig455_057881 {REF} {Length: 1741} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=115.0]; Helicase conserved C-terminal domain [PF00271.33, score=87.4]} {Human: ENSG00000278053, DDX52, DExD-box helicase 52, [RH, Score=289, Expect=6e-90]; ENSG00000277594, DDX52, DExD-box helicase 52, [RH, Score=288, Expect=2e-89]} {Mouse: ENSMUSG00000020677, Ddx52, DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, [RH, Score=289, Expect=3e-90]} {Dmel: FBgn0036754, CG5589, [RH, Score=278, Expect=5e-86]} {Celegans: WBGene00011032, R05D11.4, [RH, Score=253, Expect=6e-77]} {Smed: dd_Smed_v6_7870_0_1, dd_Smed_v6_7870_0_1, [RH, Score=246, Expect=2e-75]} {RNA1509_7314} {RNA1310_15587} {RNA815_6774} |
| 7. | MligTC455_18894 | 1132 | 23.59 | Mlig455_021180 | Neo: Irradiation Age: - |
DDX52 | 1.747 | - | - | - | - | 0.789 | 0.958 | Mlig455_021180 {REF} {Length: 1746} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=113.8]; Helicase conserved C-terminal domain [PF00271.33, score=87.4]} {Human: ENSG00000278053, DDX52, DExD-box helicase 52, [RH, Score=288, Expect=8e-90]; ENSG00000277594, DDX52, DExD-box helicase 52, [RH, Score=287, Expect=3e-89]} {Mouse: ENSMUSG00000020677, Ddx52, DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, [RH, Score=289, Expect=5e-90]} {Dmel: FBgn0036754, CG5589, [RH, Score=278, Expect=4e-86]} {Celegans: WBGene00011032, R05D11.4, [RH, Score=251, Expect=3e-76]} {Smed: dd_Smed_v6_7870_0_1, dd_Smed_v6_7870_0_1, [RH, Score=245, Expect=3e-75]} {RNA1509_7314} {RNA1310_15587, RNA1509_7314} {RNA1509_7314, RNA815_6774} |
| 8. | MligTC455_46816 | 1372 | 28.59 | Mlig455_005289 | Neo: - Age: logFC(26M/2M)=0.424 |
GMPR2 | 1.69 | - | - | 0.735 | - | - | 0.955 | Mlig455_005289 {REF} {Length: 1614} {TRANSSPLICED} {Pfam: IMP dehydrogenase / GMP reductase domain [PF00478.27, score=266.3]; FMN-dependent dehydrogenase [PF01070.20, score=21.1]} {Human: ENSG00000284752, GMPR2, guanosine monophosphate reductase 2, [RH, Score=550, Expect=0.0]; ENSG00000100938, GMPR2, guanosine monophosphate reductase 2, [RH, Score=550, Expect=0.0]; ENSG00000137198, GMPR, guanosine monophosphate reductase, [RH, Score=543, Expect=0.0]} {Mouse: ENSMUSG00000000253, Gmpr, guanosine monophosphate reductase, [RH, Score=547, Expect=0.0]; ENSMUSG00000002326, Gmpr2, guanosine monophosphate reductase 2, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00017984, F32D1.5, GMP reductase, [RH, Score=527, Expect=0.0]} {RNA1509_9539} {RNA1310_11305.1, RNA1509_9539} {RNA1509_9539, RNA815_7734} |
| 9. | MligTC455_43956 | 275 | 5.74 | Mlig455_037223 | Neo: Irradiation Age: logFC(26M/2M)=0.464 |
OXA1L | 1.654 | - | - | 0.704 | - | - | 0.950 | Mlig455_037223 {REF} {Length: 1420} {Pfam: 60Kd inner membrane protein [PF02096.22, score=44.1]} {Human: ENSG00000155463, OXA1L, OXA1L, mitochondrial inner membrane protein, [Score=96.3, Expect=2e-22]} {Mouse: ENSMUSG00000000959, Oxa1l, oxidase assembly 1-like, [Score=101, Expect=2e-24]} {Dmel: FBgn0027615, CG6404, [Score=91.3, Expect=9e-21]} {Celegans: WBGene00007215, oxa-1, OXA mitochondrial inner membrane insertase homolog, [Score=77.4, Expect=3e-16]} {Smed: dd_Smed_v6_6233_1_2, dd_Smed_v6_6233_1_2, [Score=74.3, Expect=3e-15]} {RNA1509_10268} {RNA1310_18722.1} {RNA815_10959} |
| 10. | MligTC455_17629 | 672 | 13.99 | Mlig455_033528, Mlig455_069207 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 2.073/0.02603 |
GINS1 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_033528 {REF} {Length: 938} {TRANSSPLICED} {Human: ENSG00000101003, GINS1, GINS complex subunit 1, [RH, Score=169, Expect=1e-52]} {Mouse: ENSMUSG00000027454, Gins1, GINS complex subunit 1 (Psf1 homolog), [RH, Score=167, Expect=4e-52]} {Dmel: FBgn0035194, Psf1, [RH, Score=167, Expect=4e-52]} {Celegans: WBGene00011275, psf-1, Probable DNA replication complex GINS protein PSF1, [RH, Score=130, Expect=4e-38]} {Smed: dd_Smed_v6_4317_0_1, dd_Smed_v6_4317_0_1, [RH, Score=127, Expect=8e-37]} {RNA1509_25601} {RNA1310_37344} {RNA815_18084} Mlig455_069207 {REF} {Length: 942} {TRANSSPLICED} {Human: ENSG00000101003, GINS1, GINS complex subunit 1, [RH, Score=169, Expect=1e-52]} {Mouse: ENSMUSG00000027454, Gins1, GINS complex subunit 1 (Psf1 homolog), [RH, Score=167, Expect=4e-52]} {Dmel: FBgn0035194, Psf1, [RH, Score=167, Expect=4e-52]} {Celegans: WBGene00011275, psf-1, Probable DNA replication complex GINS protein PSF1, [RH, Score=130, Expect=4e-38]} {Smed: dd_Smed_v6_4317_0_1, dd_Smed_v6_4317_0_1, [RH, Score=127, Expect=8e-37]} {RNA1509_25601} {RNA1310_37344, RNA1509_25601} {RNA1509_25601, RNA815_18084} |
| 11. | MligTC455_50965 | 454 | 9.45 | Mlig455_029740 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.564 Region-enriched R5: 2.031/0.00400 |
NOL12 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_029740 {REF} {Length: 703} {TRANSSPLICED} {Pfam: Nucleolar protein 12 (25kDa) [PF09805.11, score=49.7]} {Human: ENSG00000273899, NOL12, nucleolar protein 12, [RH, Score=62.4, Expect=6e-12]; ENSG00000100101, Z83844.1, novel transcript, [RH, Score=61.6, Expect=9e-12]} {Mouse: ENSMUSG00000033099, Nol12, nucleolar protein 12, [RH, Score=59.7, Expect=4e-11]} {RNA1509_49191} {RNA1310_51251, RNA1509_49191} {RNA1509_49191, RNA815_24269} |
| 12. | MligTC455_23884 | 1234 | 25.71 | Mlig455_013909, Mlig455_050505 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.354 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_013909 {REF} {Length: 999} {TRANSSPLICED} {RNA1509_27549, RNA1509_6154} {RNA1310_41822, RNA1509_27549} {RNA1509_27549, RNA815_26185} Mlig455_050505 {REF} {Length: 999} {TRANSSPLICED} {RNA1509_6154} {RNA1310_41822} {RNA815_26185} |
|
| 13. | MligTC455_36926 | 232 | 4.83 | Mlig455_050619 | Neo: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_050619 {REF} {Length: 655} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_49677} {RNA815_29761} | |
| 14. | MligTC455_36925 | 236 | 4.92 | Mlig455_049273 | Neo: Int S/G2/M Age: Down-Up-Up |
RFX7 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_049273 {REF} {Length: 3627} {TRANSSPLICED} {Pfam: RFX DNA-binding domain [PF02257.17, score=94.5]; RFX5 N-terminal domain [PF18326.3, score=27.5]; Poxvirus D5 protein-like [PF03288.18, score=19.2]} {Human: ENSG00000181827, RFX7, regulatory factor X7, [RH, Score=139, Expect=4e-34]; ENSG00000143390, RFX5, regulatory factor X5, [RH, Score=139, Expect=1e-34]} {Mouse: ENSMUSG00000037674, Rfx7, regulatory factor X, 7, [RH, Score=166, Expect=3e-43]} {Dmel: FBgn0037445, CG9727, [RH, Score=155, Expect=1e-39]} {Celegans: WBGene00000914, daf-19, RFX-like transcription factor daf-19, [Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_15486_0_1, dd_Smed_v6_15486_0_1, [Score=142, Expect=7e-37]} {RNA1509_24096} {RNA1310_12960, RNA1509_24096} {RNA1509_24096, RNA815_14577} |
| 15. | MligTC455_24226 | 1493 | 31.11 | Mlig455_056401 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.384 Region-enriched R5: 1.255/0.01681 |
EIF3J | 0.95 | - | - | - | - | - | 0.950 | Mlig455_056401 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: Translation initiation factor eIF3 subunit [PF08597.12, score=167.6]} {Human: ENSG00000104131, EIF3J, eukaryotic translation initiation factor 3 subunit J, [RH, Score=78.2, Expect=2e-16]} {Mouse: ENSMUSG00000027236, Eif3j1, eukaryotic translation initiation factor 3, subunit J1, [RH, Score=76.6, Expect=4e-16]; ENSMUSG00000043424, Eif3j2, eukaryotic translation initiation factor 3, subunit J2, [RH, Score=76.6, Expect=5e-16]} {Dmel: FBgn0027619, eIF3j, eukaryotic translation initiation factor 3 subunit j, [RH, Score=79.3, Expect=2e-17]} {Smed: dd_Smed_v6_930_0_1, dd_Smed_v6_930_0_1, [RH, Score=61.2, Expect=3e-11]} {RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551} {RNA1310_35319, RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551} {RNA1509_31740, RNA1509_40113, RNA1509_4637, RNA1509_55551, RNA815_17074.1} |
| 16. | MligTC455_32229 | 358 | 7.46 | Mlig455_056979 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.339/0.00367 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_056979 {REF} {Length: 661} {TRANSSPLICED} {Pfam: Cupin domain [PF07883.13, score=42.6]; AraC-like ligand binding domain [PF02311.21, score=20.4]} {RNA1509_21844} {RNA1310_48404} {RNA815_27700} | |
| 17. | MligTC455_50718 | 307 | 6.4 | Mlig455_042013 | Neo: - Age: - |
SMYD3 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_042013 {REF} {Length: 1530} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=32.8]} {Human: ENSG00000185420, SMYD3, SET and MYND domain containing 3, [RH, Score=136, Expect=6e-35]} {Mouse: ENSMUSG00000055067, Smyd3, SET and MYND domain containing 3, [RH, Score=131, Expect=3e-33]} {Dmel: FBgn0011566, Smyd3, SET and MYND domain containing, class 3, [RH, Score=173, Expect=2e-48]} {Celegans: WBGene00011068, set-14, SET domain-containing protein 14, [RH, Score=91.7, Expect=8e-20]} {Smed: dd_Smed_v6_7309_0_2, dd_Smed_v6_7309_0_2, [RH, Score=109, Expect=5e-26]} {RNA1509_39661, RNA1509_51183} {RNA1310_9856.1, RNA1509_39661, RNA1509_51183} {RNA1509_39661, RNA1509_51183, RNA815_8520} |
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