Data search
Results for MligTC455_24257
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24257 | 2294 | 47.78 | Mlig455_015743 | Neo: - Age: - Region-enriched R4: 1.054/0.01090 |
GBE1 | Mlig455_015743 {REF} {Length: 2449} {Pfam: Alpha amylase, C-terminal all-beta domain [PF02806.20, score=91.9]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=60.3]; Alpha amylase, catalytic domain [PF00128.26, score=45.1]} {Human: ENSG00000114480, GBE1, 1,4-alpha-glucan branching enzyme 1, [RH, Score=855, Expect=0.0]} {Mouse: ENSMUSG00000022707, Gbe1, glucan (1,4-alpha-), branching enzyme 1, [RH, Score=854, Expect=0.0]} {Dmel: FBgn0053138, AGBE, 1,4-Alpha-Glucan Branching Enzyme, [RH, Score=880, Expect=0.0]} {Celegans: WBGene00011409, T04A8.7, Alpha-amylase, [RH, Score=862, Expect=0.0]} {Smed: dd_Smed_v6_2161_0_1, dd_Smed_v6_2161_0_1, [RH, Score=922, Expect=0.0]} {RNA1509_3042, RNA1509_51214} {RNA1310_24312, RNA1509_51214} {RNA1509_51214, RNA815_1163.1} |
Cumulative graph for MligTC455_24257
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.342 | 5.848 | 0.63598 | 1.00000 | |
| RegionR2 | -0.251 | 5.848 | 0.43276 | 0.82319 | |
| RegionR3 | 0.4 | 5.848 | 0.10795 | 0.57268 | |
| RegionR4 | 1.054 | 5.848 | 0.00106 | 0.01090 | |
| RegionR5 | 0.745 | 5.848 | 0.00094 | 0.00968 | |
| RegionR6 | 0.084 | 5.848 | 0.74332 | 1.00000 | |
| RegionR7 | -0.619 | 5.848 | 0.06391 | 0.48621 | |
| RegionR8 | -1.755 | 5.848 | 0.00018 | 0.01310 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.669 | 5.848 | 0.50701 | 1.00000 | |
| RegenerationR2 | -0.162 | 5.848 | 0.54618 | 0.89094 | |
| RegenerationR3 | -0.242 | 5.848 | 0.39917 | 0.80210 | |
| RegenerationR4 | -0.37 | 5.848 | 0.23480 | 0.68338 | |
| RegenerationR5 | -0.454 | 5.848 | 0.09515 | 0.47274 | |
| RegenerationR6 | -0.108 | 5.848 | 0.71155 | 0.93063 | |
| RegenerationBL | 0.497 | 5.848 | 0.16500 | 0.48741 | |
| RegenerationTP | -0.401 | 5.848 | 0.37073 | 0.80844 |
Genes with expression patterns similar to MligTC455_24257
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24257 | 2294 | 47.78 | Mlig455_015743 | Neo: - Age: - Region-enriched R4: 1.054/0.01090 |
GBE1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_015743 {REF} {Length: 2449} {Pfam: Alpha amylase, C-terminal all-beta domain [PF02806.20, score=91.9]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=60.3]; Alpha amylase, catalytic domain [PF00128.26, score=45.1]} {Human: ENSG00000114480, GBE1, 1,4-alpha-glucan branching enzyme 1, [RH, Score=855, Expect=0.0]} {Mouse: ENSMUSG00000022707, Gbe1, glucan (1,4-alpha-), branching enzyme 1, [RH, Score=854, Expect=0.0]} {Dmel: FBgn0053138, AGBE, 1,4-Alpha-Glucan Branching Enzyme, [RH, Score=880, Expect=0.0]} {Celegans: WBGene00011409, T04A8.7, Alpha-amylase, [RH, Score=862, Expect=0.0]} {Smed: dd_Smed_v6_2161_0_1, dd_Smed_v6_2161_0_1, [RH, Score=922, Expect=0.0]} {RNA1509_3042, RNA1509_51214} {RNA1310_24312, RNA1509_51214} {RNA1509_51214, RNA815_1163.1} |
| 2. | MligTC455_24258 | 2193 | 45.69 | Mlig455_049449 | Neo: - Age: - Region-enriched R4: 1.073/0.00682 |
GBE1 | 5.983 | 0.999 | 0.997 | 0.997 | 0.997 | 0.995 | 0.998 | Mlig455_049449 {REF} {Length: 4477} {TRANSSPLICED} {Pfam: Alpha amylase, C-terminal all-beta domain [PF02806.20, score=91.9]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=60.3]; Alpha amylase, catalytic domain [PF00128.26, score=45.1]} {Human: ENSG00000114480, GBE1, 1,4-alpha-glucan branching enzyme 1, [RH, Score=855, Expect=0.0]} {Mouse: ENSMUSG00000022707, Gbe1, glucan (1,4-alpha-), branching enzyme 1, [RH, Score=854, Expect=0.0]} {Dmel: FBgn0053138, AGBE, 1,4-Alpha-Glucan Branching Enzyme, [RH, Score=880, Expect=0.0]} {Celegans: WBGene00011409, T04A8.7, Alpha-amylase, [RH, Score=862, Expect=0.0]} {Smed: dd_Smed_v6_2161_0_1, dd_Smed_v6_2161_0_1, [RH, Score=922, Expect=0.0]} {RNA1509_1891} {RNA1310_2888.1, RNA1509_1891} {RNA1509_1891, RNA815_1163.1} |
| 3. | MligTC455_53200 | 1491 | 31.06 | Mlig455_006563, Mlig455_006676 | Neo: - Age: - |
FAM173B | 1.742 | - | - | - | 0.962 | - | 0.780 | Mlig455_006563 {REF} {Length: 1417} {TRANSSPLICED} {Human: ENSG00000150756, FAM173B, family with sequence similarity 173 member B, [RH, Score=128, Expect=6e-36]} {Mouse: ENSMUSG00000039065, Fam173b, family with sequence similarity 173, member B, [RH, Score=117, Expect=1e-31]} {Dmel: FBgn0038871, CG3337, [RH, Score=140, Expect=3e-41]} {Celegans: WBGene00012658, Y39A1A.21, [RH, Score=124, Expect=2e-35]} {Smed: dd_Smed_v6_10644_0_1, dd_Smed_v6_10644_0_1, [RH, Score=133, Expect=2e-38]} {RNA1509_36667} {RNA1310_40332} {RNA815_25138} Mlig455_006676 {REF} {Length: 2027} {TRANSSPLICED} {Human: ENSG00000150756, FAM173B, family with sequence similarity 173 member B, [RH, Score=130, Expect=1e-36]} {Mouse: ENSMUSG00000039065, Fam173b, family with sequence similarity 173, member B, [RH, Score=119, Expect=2e-32]} {Dmel: FBgn0038871, CG3337, [RH, Score=142, Expect=4e-42]} {Celegans: WBGene00012658, Y39A1A.21, [RH, Score=126, Expect=3e-36]} {Smed: dd_Smed_v6_10644_0_1, dd_Smed_v6_10644_0_1, [RH, Score=134, Expect=7e-39]} {RNA1509_36667} {RNA1310_40332, RNA1509_36667} {RNA1509_36667, RNA815_25138} |
| 4. | MligTC455_46435 | 1130 | 23.55 | Mlig455_054966 | Neo: - Age: - |
ACADL | 1.741 | - | - | - | 0.961 | - | 0.780 | Mlig455_054966 {REF} {Length: 1760} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=142.1]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=102.3]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=81.2]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=50.5]} {Human: ENSG00000115361, ACADL, acyl-CoA dehydrogenase long chain, [Score=237, Expect=4e-73]} {Mouse: ENSMUSG00000026003, Acadl, acyl-Coenzyme A dehydrogenase, long-chain, [Score=247, Expect=4e-77]} {Dmel: FBgn0037999, CG4860, [Score=200, Expect=2e-59]} {Celegans: WBGene00015335, acdh-6, Probable acyl-CoA dehydrogenase 6, [RH, Score=429, Expect=6e-149]} {Smed: dd_Smed_v6_3160_0_1, dd_Smed_v6_3160_0_1, [RH, Score=492, Expect=1e-173]} {RNA1509_41674, RNA1509_6736} {RNA1310_17274.1, RNA1509_41674, RNA1509_6736} {RNA1509_41674, RNA1509_6736, RNA815_6539.1} |
| 5. | MligTC455_41159 | 112 | 2.33 | Mlig455_014878 | Neo: - Age: - |
1.676 | - | - | - | 0.959 | - | 0.717 | Mlig455_014878 {REF} {Length: 1646} {RNA1509_5537} {RNA1310_2775} {RNA815_5708} |
Berezikov Lab - 2020-2021 © ERIBA