M. lignano Tomo-Seq
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Results for MligTC455_53200

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53200 1491 31.06 Mlig455_006563, Mlig455_006676

Neo: -

Age: -

 FAM173B

Mlig455_006563 {REF} {Length: 1417} {TRANSSPLICED} {Human: ENSG00000150756, FAM173B, family with sequence similarity 173 member B, [RH, Score=128, Expect=6e-36]} {Mouse: ENSMUSG00000039065, Fam173b, family with sequence similarity 173, member B, [RH, Score=117, Expect=1e-31]} {Dmel: FBgn0038871, CG3337, [RH, Score=140, Expect=3e-41]} {Celegans: WBGene00012658, Y39A1A.21, [RH, Score=124, Expect=2e-35]} {Smed: dd_Smed_v6_10644_0_1, dd_Smed_v6_10644_0_1, [RH, Score=133, Expect=2e-38]} {RNA1509_36667} {RNA1310_40332} {RNA815_25138}

Mlig455_006676 {REF} {Length: 2027} {TRANSSPLICED} {Human: ENSG00000150756, FAM173B, family with sequence similarity 173 member B, [RH, Score=130, Expect=1e-36]} {Mouse: ENSMUSG00000039065, Fam173b, family with sequence similarity 173, member B, [RH, Score=119, Expect=2e-32]} {Dmel: FBgn0038871, CG3337, [RH, Score=142, Expect=4e-42]} {Celegans: WBGene00012658, Y39A1A.21, [RH, Score=126, Expect=3e-36]} {Smed: dd_Smed_v6_10644_0_1, dd_Smed_v6_10644_0_1, [RH, Score=134, Expect=7e-39]} {RNA1509_36667} {RNA1310_40332, RNA1509_36667} {RNA1509_36667, RNA815_25138}

Cumulative graph for MligTC455_53200

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.773 5.153 0.41377 1.00000
RegionR2 0 5.153 0.99902 1.00000
RegionR3 -0.017 5.153 0.96199 1.00000
RegionR4 0.569 5.153 0.19435 0.47197
RegionR5 0.66 5.153 0.03254 0.13758
RegionR6 -0.005 5.153 0.98874 1.00000
RegionR7 -1.134 5.153 0.03068 0.33300
RegionR8 -0.846 5.153 0.19450 0.78954

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.186 5.153 0.23616 0.96568
RegenerationR2 0.191 5.153 0.61404 0.92075
RegenerationR3 0.441 5.153 0.27853 0.71176
RegenerationR4 -0.185 5.153 0.66444 0.93991
RegenerationR5 -0.489 5.153 0.19475 0.62645
RegenerationR6 0.36 5.153 0.37173 0.71478
RegenerationBL 0.9 5.153 0.05346 0.26732
RegenerationTP -0.091 5.153 0.88111 1.00000


Genes with expression patterns similar to MligTC455_53200

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53200 1491 31.06 Mlig455_006563, Mlig455_006676

Neo: -

Age: -

 FAM173B 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_006563 {REF} {Length: 1417} {TRANSSPLICED} {Human: ENSG00000150756, FAM173B, family with sequence similarity 173 member B, [RH, Score=128, Expect=6e-36]} {Mouse: ENSMUSG00000039065, Fam173b, family with sequence similarity 173, member B, [RH, Score=117, Expect=1e-31]} {Dmel: FBgn0038871, CG3337, [RH, Score=140, Expect=3e-41]} {Celegans: WBGene00012658, Y39A1A.21, [RH, Score=124, Expect=2e-35]} {Smed: dd_Smed_v6_10644_0_1, dd_Smed_v6_10644_0_1, [RH, Score=133, Expect=2e-38]} {RNA1509_36667} {RNA1310_40332} {RNA815_25138}

Mlig455_006676 {REF} {Length: 2027} {TRANSSPLICED} {Human: ENSG00000150756, FAM173B, family with sequence similarity 173 member B, [RH, Score=130, Expect=1e-36]} {Mouse: ENSMUSG00000039065, Fam173b, family with sequence similarity 173, member B, [RH, Score=119, Expect=2e-32]} {Dmel: FBgn0038871, CG3337, [RH, Score=142, Expect=4e-42]} {Celegans: WBGene00012658, Y39A1A.21, [RH, Score=126, Expect=3e-36]} {Smed: dd_Smed_v6_10644_0_1, dd_Smed_v6_10644_0_1, [RH, Score=134, Expect=7e-39]} {RNA1509_36667} {RNA1310_40332, RNA1509_36667} {RNA1509_36667, RNA815_25138}
2. MligTC455_50048 946 19.71 Mlig455_056892

Neo: -

Age: Down-Up-Up

 CLYBL 2.526 - - 0.851 - 0.963 0.712 Mlig455_056892 {REF} {Length: 1244} {TRANSSPLICED} {Pfam: HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=137.9]; C-C_Bond_Lyase of the TIM-Barrel fold [PF15617.8, score=41.0]} {Human: ENSG00000125246, CLYBL, citrate lyase beta like, [RH, Score=192, Expect=5e-58]} {Mouse: ENSMUSG00000025545, Clybl, citrate lyase beta like, [RH, Score=185, Expect=2e-55]} {Celegans: WBGene00007234, C01G10.7, [RH, Score=201, Expect=3e-62]} {Smed: dd_Smed_v6_4186_0_1, dd_Smed_v6_4186_0_1, [RH, Score=190, Expect=8e-58]} {RNA1509_21343} {RNA1310_26559, RNA1509_21343} {RNA1509_21343, RNA815_12048}
3. MligTC455_24257 2294 47.78 Mlig455_015743

Neo: -

Age: -

Region-enriched R4: 1.054/0.01090

 GBE1 1.742 - - - 0.962 - 0.780 Mlig455_015743 {REF} {Length: 2449} {Pfam: Alpha amylase, C-terminal all-beta domain [PF02806.20, score=91.9]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=60.3]; Alpha amylase, catalytic domain [PF00128.26, score=45.1]} {Human: ENSG00000114480, GBE1, 1,4-alpha-glucan branching enzyme 1, [RH, Score=855, Expect=0.0]} {Mouse: ENSMUSG00000022707, Gbe1, glucan (1,4-alpha-), branching enzyme 1, [RH, Score=854, Expect=0.0]} {Dmel: FBgn0053138, AGBE, 1,4-Alpha-Glucan Branching Enzyme, [RH, Score=880, Expect=0.0]} {Celegans: WBGene00011409, T04A8.7, Alpha-amylase, [RH, Score=862, Expect=0.0]} {Smed: dd_Smed_v6_2161_0_1, dd_Smed_v6_2161_0_1, [RH, Score=922, Expect=0.0]} {RNA1509_3042, RNA1509_51214} {RNA1310_24312, RNA1509_51214} {RNA1509_51214, RNA815_1163.1}
4. MligTC455_24258 2193 45.69 Mlig455_049449

Neo: -

Age: -

Region-enriched R4: 1.073/0.00682

 GBE1 1.722 - - - 0.950 - 0.772 Mlig455_049449 {REF} {Length: 4477} {TRANSSPLICED} {Pfam: Alpha amylase, C-terminal all-beta domain [PF02806.20, score=91.9]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=60.3]; Alpha amylase, catalytic domain [PF00128.26, score=45.1]} {Human: ENSG00000114480, GBE1, 1,4-alpha-glucan branching enzyme 1, [RH, Score=855, Expect=0.0]} {Mouse: ENSMUSG00000022707, Gbe1, glucan (1,4-alpha-), branching enzyme 1, [RH, Score=854, Expect=0.0]} {Dmel: FBgn0053138, AGBE, 1,4-Alpha-Glucan Branching Enzyme, [RH, Score=880, Expect=0.0]} {Celegans: WBGene00011409, T04A8.7, Alpha-amylase, [RH, Score=862, Expect=0.0]} {Smed: dd_Smed_v6_2161_0_1, dd_Smed_v6_2161_0_1, [RH, Score=922, Expect=0.0]} {RNA1509_1891} {RNA1310_2888.1, RNA1509_1891} {RNA1509_1891, RNA815_1163.1}
5. MligTC455_40973 706 14.7 Mlig455_033127

Neo: Int S/G2/M

Age: Down-Up-Up

 MRPS5 0.952 - - - - - 0.952 Mlig455_033127 {REF} {Length: 2107} {TRANSSPLICED} {Pfam: Ribosomal protein S5, C-terminal domain [PF03719.17, score=60.9]; Ribosomal protein S5, N-terminal domain [PF00333.22, score=53.0]} {Human: ENSG00000144029, MRPS5, mitochondrial ribosomal protein S5, [RH, Score=176, Expect=8e-50]} {Mouse: ENSMUSG00000027374, Mrps5, mitochondrial ribosomal protein S5, [RH, Score=173, Expect=6e-49]} {Dmel: FBgn0044510, mRpS5, mitochondrial ribosomal protein S5, [RH, Score=202, Expect=5e-60]} {Celegans: WBGene00008452, mrps-5, Putative 28S ribosomal protein S5, mitochondrial, [RH, Score=179, Expect=3e-51]} {Smed: dd_Smed_v6_1692_0_1, dd_Smed_v6_1692_0_1, [RH, Score=268, Expect=3e-85]} {RNA1509_20334, RNA1509_46881, RNA1509_5378} {RNA1310_12432, RNA1509_20334, RNA1509_46881, RNA1509_5378} {RNA1509_20334, RNA1509_46881, RNA1509_5378, RNA815_8039}
6. MligTC455_47710 1389 28.94 Mlig455_018592, Mlig455_018607

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.433

 EIF4E2 0.95 - - - - 0.950 -

Mlig455_018592 {REF} {Length: 1413} {TRANSSPLICED} {Pfam: Eukaryotic initiation factor 4E [PF01652.20, score=170.3]} {Human: ENSG00000135930, EIF4E2, eukaryotic translation initiation factor 4E family member 2, [RH, Score=255, Expect=2e-85]} {Mouse: ENSMUSG00000026254, Eif4e2, eukaryotic translation initiation factor 4E member 2, [RH, Score=254, Expect=1e-85]} {Dmel: FBgn0053100, eIF4EHP, eukaryotic translation initiation factor 4E homologous protein, [RH, Score=178, Expect=9e-56]} {Celegans: WBGene00002062, ife-4, Eukaryotic translation initiation factor 4E-4, [RH, Score=187, Expect=2e-59]} {Smed: dd_Smed_v6_10784_0_1, dd_Smed_v6_10784_0_1, [RH, Score=191, Expect=3e-61]} {RNA1509_12785, RNA1509_29354} {RNA1310_21497, RNA1509_12785, RNA1509_29354} {RNA1509_12785, RNA1509_29354, RNA815_13167}

Mlig455_018607 {REF} {Length: 1471} {TRANSSPLICED} {Pfam: Eukaryotic initiation factor 4E [PF01652.20, score=170.3]} {Human: ENSG00000135930, EIF4E2, eukaryotic translation initiation factor 4E family member 2, [RH, Score=255, Expect=2e-85]} {Mouse: ENSMUSG00000026254, Eif4e2, eukaryotic translation initiation factor 4E member 2, [RH, Score=256, Expect=3e-86]} {Dmel: FBgn0053100, eIF4EHP, eukaryotic translation initiation factor 4E homologous protein, [RH, Score=178, Expect=7e-56]} {Celegans: WBGene00002062, ife-4, Eukaryotic translation initiation factor 4E-4, [RH, Score=187, Expect=2e-59]} {Smed: dd_Smed_v6_10784_0_1, dd_Smed_v6_10784_0_1, [RH, Score=191, Expect=2e-61]} {RNA1509_12785, RNA1509_34921} {RNA1310_21497, RNA1509_34921} {RNA1509_34921, RNA815_13167}

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