Data search


search
Exact
Search

Results for MligTC455_24305

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24305 307 6.40 Mlig455_031725

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.025/0.00021

CDK10 Mlig455_031725 {REF} {Length: 2239} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=218.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.6]} {Human: ENSG00000185324, CDK10, cyclin dependent kinase 10, [RH, Score=424, Expect=4e-148]} {Mouse: ENSMUSG00000033862, Cdk10, cyclin-dependent kinase 10, [RH, Score=425, Expect=6e-149]} {Dmel: FBgn0013435, Cdc2rk, Cdc2-related kinase, [RH, Score=376, Expect=3e-129]} {Celegans: WBGene00015203, cdk-11.1, Putative serine/threonine-protein kinase B0495.2, [Score=281, Expect=3e-88]} {Smed: dd_Smed_v6_3540_0_1, dd_Smed_v6_3540_0_1, [Score=333, Expect=4e-111]} {RNA1509_21209, RNA1509_31945} {RNA1310_24707, RNA1509_21209} {RNA1509_21209, RNA815_10940}

Cumulative graph for MligTC455_24305

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.736 3.132 0.63715 1.00000
RegionR2 -0.627 3.132 0.40807 0.80152
RegionR3 -0.429 3.132 0.47644 0.98056
RegionR4 -0.449 3.132 0.52167 0.84648
RegionR5 2.025 3.132 0.00001 0.00021
RegionR6 0.473 3.132 0.39141 0.96541
RegionR7 0.422 3.132 0.52808 1.00000
RegionR8 -0.679 3.132 0.43559 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.452 3.132 0.29806 0.99429
RegenerationR2 0.298 3.132 0.66028 0.94164
RegenerationR3 -0.192 3.132 0.77903 0.97470
RegenerationR4 0.566 3.132 0.42960 0.83043
RegenerationR5 -1.423 3.132 0.01584 0.21836
RegenerationR6 0.179 3.132 0.78606 0.97034
RegenerationBL -0.236 3.132 0.77677 1.00000
RegenerationTP -3.711 3.132 0.00999 0.16984


Genes with expression patterns similar to MligTC455_24305

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24305 307 6.4 Mlig455_031725

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.025/0.00021

CDK10 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_031725 {REF} {Length: 2239} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=218.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.6]} {Human: ENSG00000185324, CDK10, cyclin dependent kinase 10, [RH, Score=424, Expect=4e-148]} {Mouse: ENSMUSG00000033862, Cdk10, cyclin-dependent kinase 10, [RH, Score=425, Expect=6e-149]} {Dmel: FBgn0013435, Cdc2rk, Cdc2-related kinase, [RH, Score=376, Expect=3e-129]} {Celegans: WBGene00015203, cdk-11.1, Putative serine/threonine-protein kinase B0495.2, [Score=281, Expect=3e-88]} {Smed: dd_Smed_v6_3540_0_1, dd_Smed_v6_3540_0_1, [Score=333, Expect=4e-111]} {RNA1509_21209, RNA1509_31945} {RNA1310_24707, RNA1509_21209} {RNA1509_21209, RNA815_10940}
2. MligTC455_16947 1136 23.67 Mlig455_001481

Neo: Irradiation

Age: logFC(26M/2M)=0.345

Region-enriched R5: 1.131/0.00263

UBE2C 1.803 0.853 0.950 - - - - Mlig455_001481 {REF} {Length: 2661} {TRANSSPLICED} {tRNA: Gly(CCC),pseudo, score=24.5} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=106.1]} {Human: ENSG00000175063, UBE2C, ubiquitin conjugating enzyme E2 C, [Score=132, Expect=9e-40]} {Mouse: ENSMUSG00000001403, Ube2c, ubiquitin-conjugating enzyme E2C, [Score=131, Expect=7e-40]} {Dmel: FBgn0264848, vih, vihar, [Score=125, Expect=9e-38]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=93.6, Expect=1e-25]} {Smed: dd_Smed_v6_3846_0_1, dd_Smed_v6_3846_0_1, [Score=104, Expect=5e-30]} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1310_35900.2, RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558, RNA815_23169.2}
3. MligTC455_07869 135 2.81 Mlig455_068181

Neo: -

Age: -

HELQ 1.745 - - 0.795 - 0.950 - Mlig455_068181 {REF} {Length: 4217} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=56.3]; Helicase conserved C-terminal domain [PF00271.33, score=48.9]; Type III restriction enzyme, res subunit [PF04851.17, score=25.7]} {Human: ENSG00000163312, HELQ, helicase, POLQ like, [RH, Score=620, Expect=0.0]} {Mouse: ENSMUSG00000035266, Helq, helicase, POLQ-like, [RH, Score=617, Expect=0.0]} {Dmel: FBgn0002899, mus301, mutagen-sensitive 301, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00021905, helq-1, HELicase Q homolog, [RH, Score=501, Expect=7e-162]} {Smed: dd_Smed_v6_13290_0_2, dd_Smed_v6_13290_0_2, [RH, Score=572, Expect=0.0]} {RNA1509_19360} {RNA1310_6365.1, RNA1509_19360} {RNA1509_19360, RNA815_4506}
4. MligTC455_38459 45 0.93 Mlig455_039511

Neo: -

Age: -

0.977 - - - - 0.977 - Mlig455_039511 {REF} {Length: 1763} {RNA1310_28882} {RNA815_36271}
5. MligTC455_11806 29 0.59 Mlig455_068055

Neo: -

Age: -

0.974 - - - - 0.974 - Mlig455_068055 {REF} {Length: 2039} {Pfam: CG-1 domain [PF03859.18, score=37.8]} {RNA1509_59512} {RNA1310_11882.1, RNA1509_59512} {RNA1509_59512, RNA815_5297.1}
6. MligTC455_08266 13 0.28 Mlig455_011359

Neo: -

Age: -

STK10 0.972 - - - - 0.972 - Mlig455_011359 {REF} {Length: 5786} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=171.2]; Polo kinase kinase [PF12474.10, score=44.1]} {Human: ENSG00000072786, STK10, serine/threonine kinase 10, [RH, Score=352, Expect=1e-101]} {Mouse: ENSMUSG00000020272, Stk10, serine/threonine kinase 10, [RH, Score=352, Expect=1e-101]} {Dmel: FBgn0035001, Slik, Sterile20-like kinase, [RH, Score=338, Expect=7e-94]} {Celegans: WBGene00007287, gck-4, Germinal Center Kinase family, [RH, Score=295, Expect=1e-81]} {Smed: dd_Smed_v6_5720_0_1, dd_Smed_v6_5720_0_1, [RH, Score=333, Expect=4e-96]} {RNA1509_2678} {RNA1310_1183.1} {RNA815_8133}
7. MligTC455_43445 98 2.05 Mlig455_043288

Neo: -

Age: -

0.969 - - 0.969 - - - Mlig455_043288 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: NICE-3 protein [PF07406.13, score=86.6]} {Dmel: FBgn0034172, CG6665, [Score=57.8, Expect=2e-09]} {RNA1509_24375} {RNA1310_15514.2} {RNA815_13288}
8. MligTC455_50551 12 0.25 Mlig455_021152, Mlig455_057857

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.621

MAP3K7 0.967 - - - - 0.967 -

Mlig455_021152 {REF} {Length: 2482} {Pfam: Protein kinase domain [PF00069.27, score=98.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.9]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=80.1, Expect=3e-15]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=79.7, Expect=2e-15]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=72.8, Expect=4e-13]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_6769_0_1, dd_Smed_v6_6769_0_1, [Score=79.0, Expect=2e-15]} {RNA1509_52288} {RNA1310_14858.1} {RNA815_34629}

Mlig455_057857 {REF} {Length: 2999} {Pfam: Protein kinase domain [PF00069.27, score=97.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.8]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=80.5, Expect=1e-15]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=80.5, Expect=9e-16]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=69.7, Expect=3e-12]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [Score=78.2, Expect=3e-15]} {Smed: dd_Smed_v6_6769_0_1, dd_Smed_v6_6769_0_1, [Score=77.4, Expect=5e-15]} {RNA1509_52288} {RNA1310_14858.1} {RNA815_34629}
9. MligTC455_17109 16 0.34 Mlig455_052533

Neo: -

Age: logFC(26M/2M)=1.201

0.966 - - - - 0.966 - Mlig455_052533 {REF} {Length: 5477} {Pfam: Phage integrase family [PF00589.24, score=36.3]} {RNA1509_57857} {RNA1310_23997.1} {RNA815_7697}
10. MligTC455_47059 218 4.54 Mlig455_042173

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.399

Region-enriched R5: 3.792/0.00000

HLF 0.96 - - 0.960 - - - Mlig455_042173 {REF} {Length: 2486} {Pfam: Basic region leucine zipper [PF07716.17, score=51.1]; bZIP transcription factor [PF00170.23, score=22.7]} {Human: ENSG00000108924, HLF, HLF, PAR bZIP transcription factor, [RH, Score=86.7, Expect=1e-18]; ENSG00000167074, TEF, TEF, PAR bZIP transcription factor, [RH, Score=85.1, Expect=3e-18]; ENSG00000105516, DBP, D-box binding PAR bZIP transcription factor, [RH, Score=85.1, Expect=6e-18]} {Mouse: ENSMUSG00000003949, Hlf, hepatic leukemia factor, [RH, Score=86.3, Expect=1e-18]; ENSMUSG00000022389, Tef, thyrotroph embryonic factor, [RH, Score=85.9, Expect=1e-18]; ENSMUSG00000059824, Dbp, D site albumin promoter binding protein, [RH, Score=84.3, Expect=7e-18]} {Dmel: FBgn0034096, CG7786, [RH, Score=110, Expect=1e-28]} {Celegans: WBGene00000469, ces-2, Cell death specification protein 2, [RH, Score=80.1, Expect=2e-17]} {Smed: dd_Smed_v6_14028_0_2, dd_Smed_v6_14028_0_2, [RH, Score=69.7, Expect=2e-14]} {RNA1509_22777, RNA1509_50395} {RNA1310_10538, RNA1509_22777, RNA1509_50395} {RNA1509_22777, RNA1509_50395, RNA815_13144}
11. MligTC455_17945 12 0.24 Mlig455_014537

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_014537 {REF} {Length: 990} {NoTransDecoderORF} {RNA1310_92317} {RNA815_19412}
12. MligTC455_33316 29 0.61 Mlig455_052423

Neo: -

Age: -

TM9SF2 0.956 - - - - 0.956 - Mlig455_052423 {REF} {Length: 2961} {Pfam: Endomembrane protein 70 [PF02990.18, score=636.3]; Citrate transporter [PF03600.18, score=18.8]} {Human: ENSG00000125304, TM9SF2, transmembrane 9 superfamily member 2, [Score=754, Expect=0.0]} {Mouse: ENSMUSG00000025544, Tm9sf2, transmembrane 9 superfamily member 2, [Score=749, Expect=0.0]} {Dmel: FBgn0032880, TM9SF2, Transmembrane 9 superfamily protein member 2, [Score=745, Expect=0.0]} {Celegans: WBGene00006472, tag-123, Transmembrane 9 superfamily member, [Score=691, Expect=0.0]} {Smed: dd_Smed_v6_2806_0_1, dd_Smed_v6_2806_0_1, [Score=424, Expect=1e-139]} {RNA1509_46604} {RNA1310_8008} {RNA815_3036}
13. MligTC455_34505 332 6.92 Mlig455_056584, Mlig455_056605

Neo: Int S/G2/M

Age: -

Region-enriched R5: 3.021/0.00055

SLBP 0.956 - - 0.956 - - -

Mlig455_056584 {REF} {Length: 2776} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079}

Mlig455_056605 {REF} {Length: 2903} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079}
14. MligTC455_11592 199 4.14 Mlig455_007717

Neo: -

Age: logFC(26M/2M)=1.565

PLB1 0.955 - - - - 0.955 - Mlig455_007717 {REF} {Length: 2078} {Pfam: GDSL-like Lipase/Acylhydrolase [PF00657.24, score=75.1]; GDSL-like Lipase/Acylhydrolase family [PF13472.8, score=39.7]} {Human: ENSG00000163803, PLB1, phospholipase B1, [Score=281, Expect=5e-84]} {Mouse: ENSMUSG00000029134, Plb1, phospholipase B1, [Score=283, Expect=1e-87]} {Dmel: FBgn0036939, CG7365, [Score=202, Expect=2e-60]} {Celegans: WBGene00012201, W02B12.1, [RH, Score=229, Expect=3e-71]} {Smed: dd_Smed_v6_2690_0_1, dd_Smed_v6_2690_0_1, [RH, Score=288, Expect=1e-93]} {RNA1509_8986} {RNA1310_10650, RNA1509_8986} {RNA1509_8986, RNA815_3617}
15. MligTC455_50286 107 2.22 Mlig455_056616

Neo: -

Age: -

LENG1 0.954 - - - - 0.954 - Mlig455_056616 {REF} {Length: 2994} {TRANSSPLICED} {Pfam: N-terminal domain of CBF1 interacting co-repressor CIR [PF10197.11, score=33.9]} {Human: ENSG00000105617, LENG1, leukocyte receptor cluster member 1, [Score=86.3, Expect=2e-19]} {Mouse: ENSMUSG00000078813, Leng1, leukocyte receptor cluster (LRC) member 1, [Score=55.8, Expect=8e-09]} {Dmel: FBgn0037809, CG12818, [RH, Score=82.0, Expect=5e-18]} {Smed: dd_Smed_v6_7939_0_1, dd_Smed_v6_7939_0_1, [Score=62.4, Expect=2e-11]} {RNA1509_27956} {RNA1310_27973} {RNA815_32915}
16. MligTC455_44886 664 13.83 Mlig455_009418

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.267/0.00151

0.953 - 0.953 - - - - Mlig455_009418 {REF} {Length: 2273} {TRANSSPLICED} {RNA1509_19251} {RNA1310_6205.2, RNA1509_19251} {RNA1509_19251, RNA815_3904}
17. MligTC455_43710 208 4.34 Mlig455_012241, Mlig455_012253

Neo: -

Age: -

MTMR4 0.95 - - - - 0.950 -

Mlig455_012241 {REF} {Length: 4094} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=343.8]; FYVE zinc finger [PF01363.23, score=58.8]} {Human: ENSG00000108389, MTMR4, myotubularin related protein 4, [Score=228, Expect=3e-61]} {Mouse: ENSMUSG00000018401, Mtmr4, myotubularin related protein 4, [Score=228, Expect=2e-61]} {Dmel: FBgn0028497, CG3530, [Score=193, Expect=8e-52]} {Celegans: WBGene00003478, mtm-6, Myotubularin-related protein 6, [Score=167, Expect=2e-42]} {Smed: dd_Smed_v6_9000_0_1, dd_Smed_v6_9000_0_1, [Score=196, Expect=6e-52]} {RNA1509_13518} {RNA1310_5330} {RNA815_8207}

Mlig455_012253 {REF} {Length: 2280} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=90.7]; FYVE zinc finger [PF01363.23, score=61.1]} {Human: ENSG00000108389, MTMR4, myotubularin related protein 4, [Score=84.7, Expect=2e-17]; ENSG00000100330, MTMR3, myotubularin related protein 3, [Score=83.2, Expect=6e-17]} {Mouse: ENSMUSG00000018401, Mtmr4, myotubularin related protein 4, [Score=84.7, Expect=2e-17]; ENSMUSG00000034354, Mtmr3, myotubularin related protein 3, [Score=83.6, Expect=3e-17]} {Dmel: FBgn0030735, CG3632, [Score=73.6, Expect=6e-14]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [Score=69.3, Expect=9e-13]} {Smed: dd_Smed_v6_9000_0_1, dd_Smed_v6_9000_0_1, [Score=96.7, Expect=6e-22]} {RNA1509_13518} {RNA1310_50995} {RNA815_8207}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA