Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_24305 | 307 | 6.40 | Mlig455_031725 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.025/0.00021 |
CDK10 | Mlig455_031725 {REF} {Length: 2239} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=218.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.6]} {Human: ENSG00000185324, CDK10, cyclin dependent kinase 10, [RH, Score=424, Expect=4e-148]} {Mouse: ENSMUSG00000033862, Cdk10, cyclin-dependent kinase 10, [RH, Score=425, Expect=6e-149]} {Dmel: FBgn0013435, Cdc2rk, Cdc2-related kinase, [RH, Score=376, Expect=3e-129]} {Celegans: WBGene00015203, cdk-11.1, Putative serine/threonine-protein kinase B0495.2, [Score=281, Expect=3e-88]} {Smed: dd_Smed_v6_3540_0_1, dd_Smed_v6_3540_0_1, [Score=333, Expect=4e-111]} {RNA1509_21209, RNA1509_31945} {RNA1310_24707, RNA1509_21209} {RNA1509_21209, RNA815_10940} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.736 | 3.132 | 0.63715 | 1.00000 | |
RegionR2 | -0.627 | 3.132 | 0.40807 | 0.80152 | |
RegionR3 | -0.429 | 3.132 | 0.47644 | 0.98056 | |
RegionR4 | -0.449 | 3.132 | 0.52167 | 0.84648 | |
RegionR5 | 2.025 | 3.132 | 0.00001 | 0.00021 | |
RegionR6 | 0.473 | 3.132 | 0.39141 | 0.96541 | |
RegionR7 | 0.422 | 3.132 | 0.52808 | 1.00000 | |
RegionR8 | -0.679 | 3.132 | 0.43559 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -5.452 | 3.132 | 0.29806 | 0.99429 | |
RegenerationR2 | 0.298 | 3.132 | 0.66028 | 0.94164 | |
RegenerationR3 | -0.192 | 3.132 | 0.77903 | 0.97470 | |
RegenerationR4 | 0.566 | 3.132 | 0.42960 | 0.83043 | |
RegenerationR5 | -1.423 | 3.132 | 0.01584 | 0.21836 | |
RegenerationR6 | 0.179 | 3.132 | 0.78606 | 0.97034 | |
RegenerationBL | -0.236 | 3.132 | 0.77677 | 1.00000 | |
RegenerationTP | -3.711 | 3.132 | 0.00999 | 0.16984 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_24305 | 307 | 6.4 | Mlig455_031725 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.025/0.00021 |
CDK10 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031725 {REF} {Length: 2239} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=218.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.6]} {Human: ENSG00000185324, CDK10, cyclin dependent kinase 10, [RH, Score=424, Expect=4e-148]} {Mouse: ENSMUSG00000033862, Cdk10, cyclin-dependent kinase 10, [RH, Score=425, Expect=6e-149]} {Dmel: FBgn0013435, Cdc2rk, Cdc2-related kinase, [RH, Score=376, Expect=3e-129]} {Celegans: WBGene00015203, cdk-11.1, Putative serine/threonine-protein kinase B0495.2, [Score=281, Expect=3e-88]} {Smed: dd_Smed_v6_3540_0_1, dd_Smed_v6_3540_0_1, [Score=333, Expect=4e-111]} {RNA1509_21209, RNA1509_31945} {RNA1310_24707, RNA1509_21209} {RNA1509_21209, RNA815_10940} |
2. | MligTC455_16947 | 1136 | 23.67 | Mlig455_001481 | Neo: Irradiation Age: logFC(26M/2M)=0.345 Region-enriched R5: 1.131/0.00263 |
UBE2C | 1.803 | 0.853 | 0.950 | - | - | - | - | Mlig455_001481 {REF} {Length: 2661} {TRANSSPLICED} {tRNA: Gly(CCC),pseudo, score=24.5} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=106.1]} {Human: ENSG00000175063, UBE2C, ubiquitin conjugating enzyme E2 C, [Score=132, Expect=9e-40]} {Mouse: ENSMUSG00000001403, Ube2c, ubiquitin-conjugating enzyme E2C, [Score=131, Expect=7e-40]} {Dmel: FBgn0264848, vih, vihar, [Score=125, Expect=9e-38]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=93.6, Expect=1e-25]} {Smed: dd_Smed_v6_3846_0_1, dd_Smed_v6_3846_0_1, [Score=104, Expect=5e-30]} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1310_35900.2, RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558, RNA815_23169.2} |
3. | MligTC455_07869 | 135 | 2.81 | Mlig455_068181 | Neo: - Age: - |
HELQ | 1.745 | - | - | 0.795 | - | 0.950 | - | Mlig455_068181 {REF} {Length: 4217} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=56.3]; Helicase conserved C-terminal domain [PF00271.33, score=48.9]; Type III restriction enzyme, res subunit [PF04851.17, score=25.7]} {Human: ENSG00000163312, HELQ, helicase, POLQ like, [RH, Score=620, Expect=0.0]} {Mouse: ENSMUSG00000035266, Helq, helicase, POLQ-like, [RH, Score=617, Expect=0.0]} {Dmel: FBgn0002899, mus301, mutagen-sensitive 301, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00021905, helq-1, HELicase Q homolog, [RH, Score=501, Expect=7e-162]} {Smed: dd_Smed_v6_13290_0_2, dd_Smed_v6_13290_0_2, [RH, Score=572, Expect=0.0]} {RNA1509_19360} {RNA1310_6365.1, RNA1509_19360} {RNA1509_19360, RNA815_4506} |
4. | MligTC455_38459 | 45 | 0.93 | Mlig455_039511 | Neo: - Age: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_039511 {REF} {Length: 1763} {RNA1310_28882} {RNA815_36271} | |
5. | MligTC455_11806 | 29 | 0.59 | Mlig455_068055 | Neo: - Age: - |
0.974 | - | - | - | - | 0.974 | - | Mlig455_068055 {REF} {Length: 2039} {Pfam: CG-1 domain [PF03859.18, score=37.8]} {RNA1509_59512} {RNA1310_11882.1, RNA1509_59512} {RNA1509_59512, RNA815_5297.1} | |
6. | MligTC455_08266 | 13 | 0.28 | Mlig455_011359 | Neo: - Age: - |
STK10 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_011359 {REF} {Length: 5786} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=171.2]; Polo kinase kinase [PF12474.10, score=44.1]} {Human: ENSG00000072786, STK10, serine/threonine kinase 10, [RH, Score=352, Expect=1e-101]} {Mouse: ENSMUSG00000020272, Stk10, serine/threonine kinase 10, [RH, Score=352, Expect=1e-101]} {Dmel: FBgn0035001, Slik, Sterile20-like kinase, [RH, Score=338, Expect=7e-94]} {Celegans: WBGene00007287, gck-4, Germinal Center Kinase family, [RH, Score=295, Expect=1e-81]} {Smed: dd_Smed_v6_5720_0_1, dd_Smed_v6_5720_0_1, [RH, Score=333, Expect=4e-96]} {RNA1509_2678} {RNA1310_1183.1} {RNA815_8133} |
7. | MligTC455_43445 | 98 | 2.05 | Mlig455_043288 | Neo: - Age: - |
0.969 | - | - | 0.969 | - | - | - | Mlig455_043288 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: NICE-3 protein [PF07406.13, score=86.6]} {Dmel: FBgn0034172, CG6665, [Score=57.8, Expect=2e-09]} {RNA1509_24375} {RNA1310_15514.2} {RNA815_13288} | |
8. | MligTC455_50551 | 12 | 0.25 | Mlig455_021152, Mlig455_057857 | Neo: - |
MAP3K7 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_021152 {REF} {Length: 2482} {Pfam: Protein kinase domain [PF00069.27, score=98.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.9]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=80.1, Expect=3e-15]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=79.7, Expect=2e-15]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=72.8, Expect=4e-13]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_6769_0_1, dd_Smed_v6_6769_0_1, [Score=79.0, Expect=2e-15]} {RNA1509_52288} {RNA1310_14858.1} {RNA815_34629} Mlig455_057857 {REF} {Length: 2999} {Pfam: Protein kinase domain [PF00069.27, score=97.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.8]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=80.5, Expect=1e-15]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=80.5, Expect=9e-16]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=69.7, Expect=3e-12]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [Score=78.2, Expect=3e-15]} {Smed: dd_Smed_v6_6769_0_1, dd_Smed_v6_6769_0_1, [Score=77.4, Expect=5e-15]} {RNA1509_52288} {RNA1310_14858.1} {RNA815_34629} |
9. | MligTC455_17109 | 16 | 0.34 | Mlig455_052533 | Neo: - Age: logFC(26M/2M)=1.201 |
0.966 | - | - | - | - | 0.966 | - | Mlig455_052533 {REF} {Length: 5477} {Pfam: Phage integrase family [PF00589.24, score=36.3]} {RNA1509_57857} {RNA1310_23997.1} {RNA815_7697} | |
10. | MligTC455_47059 | 218 | 4.54 | Mlig455_042173 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.399 Region-enriched R5: 3.792/0.00000 |
HLF | 0.96 | - | - | 0.960 | - | - | - | Mlig455_042173 {REF} {Length: 2486} {Pfam: Basic region leucine zipper [PF07716.17, score=51.1]; bZIP transcription factor [PF00170.23, score=22.7]} {Human: ENSG00000108924, HLF, HLF, PAR bZIP transcription factor, [RH, Score=86.7, Expect=1e-18]; ENSG00000167074, TEF, TEF, PAR bZIP transcription factor, [RH, Score=85.1, Expect=3e-18]; ENSG00000105516, DBP, D-box binding PAR bZIP transcription factor, [RH, Score=85.1, Expect=6e-18]} {Mouse: ENSMUSG00000003949, Hlf, hepatic leukemia factor, [RH, Score=86.3, Expect=1e-18]; ENSMUSG00000022389, Tef, thyrotroph embryonic factor, [RH, Score=85.9, Expect=1e-18]; ENSMUSG00000059824, Dbp, D site albumin promoter binding protein, [RH, Score=84.3, Expect=7e-18]} {Dmel: FBgn0034096, CG7786, [RH, Score=110, Expect=1e-28]} {Celegans: WBGene00000469, ces-2, Cell death specification protein 2, [RH, Score=80.1, Expect=2e-17]} {Smed: dd_Smed_v6_14028_0_2, dd_Smed_v6_14028_0_2, [RH, Score=69.7, Expect=2e-14]} {RNA1509_22777, RNA1509_50395} {RNA1310_10538, RNA1509_22777, RNA1509_50395} {RNA1509_22777, RNA1509_50395, RNA815_13144} |
11. | MligTC455_17945 | 12 | 0.24 | Mlig455_014537 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_014537 {REF} {Length: 990} {NoTransDecoderORF} {RNA1310_92317} {RNA815_19412} | |
12. | MligTC455_33316 | 29 | 0.61 | Mlig455_052423 | Neo: - Age: - |
TM9SF2 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_052423 {REF} {Length: 2961} {Pfam: Endomembrane protein 70 [PF02990.18, score=636.3]; Citrate transporter [PF03600.18, score=18.8]} {Human: ENSG00000125304, TM9SF2, transmembrane 9 superfamily member 2, [Score=754, Expect=0.0]} {Mouse: ENSMUSG00000025544, Tm9sf2, transmembrane 9 superfamily member 2, [Score=749, Expect=0.0]} {Dmel: FBgn0032880, TM9SF2, Transmembrane 9 superfamily protein member 2, [Score=745, Expect=0.0]} {Celegans: WBGene00006472, tag-123, Transmembrane 9 superfamily member, [Score=691, Expect=0.0]} {Smed: dd_Smed_v6_2806_0_1, dd_Smed_v6_2806_0_1, [Score=424, Expect=1e-139]} {RNA1509_46604} {RNA1310_8008} {RNA815_3036} |
13. | MligTC455_34505 | 332 | 6.92 | Mlig455_056584, Mlig455_056605 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.021/0.00055 |
SLBP | 0.956 | - | - | 0.956 | - | - | - | Mlig455_056584 {REF} {Length: 2776} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079} Mlig455_056605 {REF} {Length: 2903} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079} |
14. | MligTC455_11592 | 199 | 4.14 | Mlig455_007717 | Neo: - Age: logFC(26M/2M)=1.565 |
PLB1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_007717 {REF} {Length: 2078} {Pfam: GDSL-like Lipase/Acylhydrolase [PF00657.24, score=75.1]; GDSL-like Lipase/Acylhydrolase family [PF13472.8, score=39.7]} {Human: ENSG00000163803, PLB1, phospholipase B1, [Score=281, Expect=5e-84]} {Mouse: ENSMUSG00000029134, Plb1, phospholipase B1, [Score=283, Expect=1e-87]} {Dmel: FBgn0036939, CG7365, [Score=202, Expect=2e-60]} {Celegans: WBGene00012201, W02B12.1, [RH, Score=229, Expect=3e-71]} {Smed: dd_Smed_v6_2690_0_1, dd_Smed_v6_2690_0_1, [RH, Score=288, Expect=1e-93]} {RNA1509_8986} {RNA1310_10650, RNA1509_8986} {RNA1509_8986, RNA815_3617} |
15. | MligTC455_50286 | 107 | 2.22 | Mlig455_056616 | Neo: - Age: - |
LENG1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_056616 {REF} {Length: 2994} {TRANSSPLICED} {Pfam: N-terminal domain of CBF1 interacting co-repressor CIR [PF10197.11, score=33.9]} {Human: ENSG00000105617, LENG1, leukocyte receptor cluster member 1, [Score=86.3, Expect=2e-19]} {Mouse: ENSMUSG00000078813, Leng1, leukocyte receptor cluster (LRC) member 1, [Score=55.8, Expect=8e-09]} {Dmel: FBgn0037809, CG12818, [RH, Score=82.0, Expect=5e-18]} {Smed: dd_Smed_v6_7939_0_1, dd_Smed_v6_7939_0_1, [Score=62.4, Expect=2e-11]} {RNA1509_27956} {RNA1310_27973} {RNA815_32915} |
16. | MligTC455_44886 | 664 | 13.83 | Mlig455_009418 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.267/0.00151 |
0.953 | - | 0.953 | - | - | - | - | Mlig455_009418 {REF} {Length: 2273} {TRANSSPLICED} {RNA1509_19251} {RNA1310_6205.2, RNA1509_19251} {RNA1509_19251, RNA815_3904} | |
17. | MligTC455_43710 | 208 | 4.34 | Mlig455_012241, Mlig455_012253 | Neo: - Age: - |
MTMR4 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_012241 {REF} {Length: 4094} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=343.8]; FYVE zinc finger [PF01363.23, score=58.8]} {Human: ENSG00000108389, MTMR4, myotubularin related protein 4, [Score=228, Expect=3e-61]} {Mouse: ENSMUSG00000018401, Mtmr4, myotubularin related protein 4, [Score=228, Expect=2e-61]} {Dmel: FBgn0028497, CG3530, [Score=193, Expect=8e-52]} {Celegans: WBGene00003478, mtm-6, Myotubularin-related protein 6, [Score=167, Expect=2e-42]} {Smed: dd_Smed_v6_9000_0_1, dd_Smed_v6_9000_0_1, [Score=196, Expect=6e-52]} {RNA1509_13518} {RNA1310_5330} {RNA815_8207} Mlig455_012253 {REF} {Length: 2280} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=90.7]; FYVE zinc finger [PF01363.23, score=61.1]} {Human: ENSG00000108389, MTMR4, myotubularin related protein 4, [Score=84.7, Expect=2e-17]; ENSG00000100330, MTMR3, myotubularin related protein 3, [Score=83.2, Expect=6e-17]} {Mouse: ENSMUSG00000018401, Mtmr4, myotubularin related protein 4, [Score=84.7, Expect=2e-17]; ENSMUSG00000034354, Mtmr3, myotubularin related protein 3, [Score=83.6, Expect=3e-17]} {Dmel: FBgn0030735, CG3632, [Score=73.6, Expect=6e-14]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [Score=69.3, Expect=9e-13]} {Smed: dd_Smed_v6_9000_0_1, dd_Smed_v6_9000_0_1, [Score=96.7, Expect=6e-22]} {RNA1509_13518} {RNA1310_50995} {RNA815_8207} |