M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_24386

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24386 107 2.24 Mlig455_010245

Neo: -

Age: -

Region-enriched R5: 2.148/0.04167

 PRR9 Mlig455_010245 {REF} {Length: 2798} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.4, Expect=4e-06]} {RNA1310_35288} {RNA815_16280}

Cumulative graph for MligTC455_24386

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.198 2.174 0.42818 1.00000
RegionR2 0.288 2.174 0.75773 1.00000
RegionR3 0.398 2.174 0.67862 1.00000
RegionR4 1.127 2.174 0.35990 0.68259
RegionR5 2.148 2.174 0.00638 0.04167
RegionR6 0.502 2.174 0.62684 1.00000
RegionR7 -1.088 2.174 0.99085 1.00000
RegionR8 0.823 2.174 0.55273 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.352 2.174 1.00000 1.00000
RegenerationR2 -0.383 2.174 0.59150 0.91143
RegenerationR3 0.52 2.174 0.54687 0.88195
RegenerationR4 0.567 2.174 0.52118 0.87964
RegenerationR5 -2.29 2.174 0.00266 0.09032
RegenerationR6 0.07 2.174 0.93948 1.00000
RegenerationBL -4.754 2.174 0.05220 0.26374
RegenerationTP -0.255 2.174 0.85321 1.00000


Genes with expression patterns similar to MligTC455_24386

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24386 107 2.24 Mlig455_010245

Neo: -

Age: -

Region-enriched R5: 2.148/0.04167

 PRR9 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_010245 {REF} {Length: 2798} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.4, Expect=4e-06]} {RNA1310_35288} {RNA815_16280}
2. MligTC455_41662 698 14.54 Mlig455_055240

Neo: -

Age: Down-Up-Up

Region-enriched R3: 1.095/0.04044

 CALB1 1.743 - - - 0.767 - 0.976 Mlig455_055240 {REF} {Length: 1532} {Pfam: EF hand [PF00036.34, score=91.4]; EF-hand domain [PF13405.8, score=82.6]; EF hand [PF13202.8, score=70.0]; EF-hand domain pair [PF13499.8, score=62.1]; EF-hand domain pair [PF13833.8, score=30.2]; Uncharacterised protein family (UPF0149) [PF03695.15, score=19.5]; EF hand [PF14788.8, score=18.6]} {Human: ENSG00000104327, CALB1, calbindin 1, [Score=131, Expect=9e-37]; ENSG00000079689, SCGN, secretagogin, EF-hand calcium binding protein, [Score=127, Expect=3e-35]} {Mouse: ENSMUSG00000028222, Calb1, calbindin 1, [Score=130, Expect=2e-36]; ENSMUSG00000021337, Scgn, secretagogin, EF-hand calcium binding protein, [Score=124, Expect=4e-34]; ENSMUSG00000003657, Calb2, calbindin 2, [Score=124, Expect=4e-34]} {Dmel: FBgn0004580, Cbp53E, Calbindin 53E, [Score=209, Expect=2e-66]} {Smed: dd_Smed_v6_1230_0_1, dd_Smed_v6_1230_0_1, [Score=256, Expect=2e-85]} {RNA1509_4424} {RNA1310_15438.1} {RNA815_6283}
3. MligTC455_32320 939 19.56 Mlig455_065946

Neo: -

Age: logFC(26M/2M)=2.516

Region-enriched R4: 1.398/0.01390

 CTSA 1.7 0.745 - - - - 0.955 Mlig455_065946 {REF} {Length: 2621} {Pfam: Serine carboxypeptidase [PF00450.24, score=405.7]} {Human: ENSG00000064601, CTSA, cathepsin A, [RH, Score=417, Expect=1e-141]} {Mouse: ENSMUSG00000017760, Ctsa, cathepsin A, [RH, Score=425, Expect=1e-144]} {Dmel: FBgn0038738, CG4572, [Score=108, Expect=4e-25]} {Celegans: WBGene00019605, ctsa-1, Uncharacterized serine carboxypeptidase ctsa-1, [RH, Score=339, Expect=1e-111]} {Smed: dd_Smed_v6_785_0_1, dd_Smed_v6_785_0_1, [RH, Score=392, Expect=5e-132]} {RNA1509_11067, RNA1509_2939, RNA1509_366, RNA1509_5001, RNA1509_56324, RNA1509_6114} {RNA1310_10272.1, RNA1509_11067, RNA1509_2939, RNA1509_366, RNA1509_5001, RNA1509_56324, RNA1509_6114} {RNA1509_11067, RNA1509_2939, RNA1509_366, RNA1509_5001, RNA1509_56324, RNA1509_6114, RNA815_3612.1}
4. MligTC455_26875 153 3.19 Mlig455_041903

Neo: -

Age: -

 0.982 0.982 - - - - - Mlig455_041903 {REF} {Length: 1607} {TRANSSPLICED} {Pfam: Putative adhesin [PF13349.8, score=21.3]} {RNA1509_54351} {RNA1310_16408, RNA1509_54351} {RNA1509_54351, RNA815_7674}
5. MligTC455_53862 155 3.23 Mlig455_012200

Neo: -

Age: -

 0.976 - - - - - 0.976 Mlig455_012200 {REF} {Length: 995} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.3]} {RNA1310_67285} {RNA815_35008}
6. MligTC455_41661 1539 32.07 Mlig455_046013, Mlig455_055197

Neo: -

Age: -

Region-enriched R3: 1.129/0.02407

 CALB2 0.975 - - - - - 0.975

Mlig455_046013 {REF} {Length: 1827} {Pfam: EF hand [PF00036.34, score=116.6]; EF-hand domain [PF13405.8, score=104.9]; EF-hand domain pair [PF13499.8, score=88.8]; EF hand [PF13202.8, score=79.8]; EF-hand domain pair [PF13833.8, score=31.8]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=30.6]} {Human: ENSG00000172137, CALB2, calbindin 2, [RH, Score=221, Expect=7e-71]; ENSG00000282830, CALB2, calbindin 2, [RH, Score=221, Expect=7e-71]} {Mouse: ENSMUSG00000003657, Calb2, calbindin 2, [RH, Score=221, Expect=5e-71]} {Dmel: FBgn0004580, Cbp53E, Calbindin 53E, [RH, Score=359, Expect=6e-125]} {Smed: dd_Smed_v6_1230_0_1, dd_Smed_v6_1230_0_1, [RH, Score=419, Expect=9e-149]} {RNA1509_4424} {RNA1310_15438.1} {RNA815_6283}

Mlig455_055197 {REF} {Length: 1830} {Pfam: EF hand [PF00036.34, score=116.6]; EF-hand domain [PF13405.8, score=104.9]; EF-hand domain pair [PF13499.8, score=88.8]; EF hand [PF13202.8, score=79.8]; EF-hand domain pair [PF13833.8, score=31.8]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=30.6]} {Human: ENSG00000172137, CALB2, calbindin 2, [RH, Score=221, Expect=7e-71]; ENSG00000282830, CALB2, calbindin 2, [RH, Score=221, Expect=7e-71]} {Mouse: ENSMUSG00000003657, Calb2, calbindin 2, [RH, Score=221, Expect=5e-71]} {Dmel: FBgn0004580, Cbp53E, Calbindin 53E, [RH, Score=359, Expect=6e-125]} {Smed: dd_Smed_v6_1230_0_1, dd_Smed_v6_1230_0_1, [RH, Score=419, Expect=9e-149]} {RNA1509_4424, RNA1509_45455, RNA1509_50262} {RNA1310_15438.1, RNA1509_4424, RNA1509_45455, RNA1509_50262} {RNA1509_4424, RNA1509_45455, RNA1509_50262, RNA815_6283}
7. MligTC455_50630 266 5.55 Mlig455_016781, Mlig455_016800

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.660

Region-enriched R3: 2.467/0.02683

 NPL 0.975 - - - - - 0.975

Mlig455_016781 {REF} {Length: 2232} {TRANSSPLICED} {Pfam: Dihydrodipicolinate synthetase family [PF00701.24, score=135.2]} {Human: ENSG00000135838, NPL, N-acetylneuraminate pyruvate lyase, [RH, Score=166, Expect=2e-48]} {Mouse: ENSMUSG00000042684, Npl, N-acetylneuraminate pyruvate lyase, [RH, Score=177, Expect=4e-53]} {Smed: dd_Smed_v6_2981_0_1, dd_Smed_v6_2981_0_1, [RH, Score=124, Expect=3e-33]} {RNA1509_37383} {RNA1310_25843.2} {RNA815_6069.1}

Mlig455_016800 {REF} {Length: 2238} {TRANSSPLICED} {Pfam: Dihydrodipicolinate synthetase family [PF00701.24, score=135.2]} {Human: ENSG00000135838, NPL, N-acetylneuraminate pyruvate lyase, [RH, Score=166, Expect=2e-48]} {Mouse: ENSMUSG00000042684, Npl, N-acetylneuraminate pyruvate lyase, [RH, Score=177, Expect=4e-53]} {Smed: dd_Smed_v6_2981_0_1, dd_Smed_v6_2981_0_1, [RH, Score=124, Expect=3e-33]} {RNA1509_20791, RNA1509_37383, RNA1509_57913} {RNA1310_25843.2, RNA1509_20791, RNA1509_37383, RNA1509_57913} {RNA1509_20791, RNA1509_37383, RNA1509_57913, RNA815_6069.1}
8. MligTC455_03726 398 8.29 Mlig455_067123

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.557

Region-enriched R3: 3.154/0.00000

 0.972 - - - - - 0.972 Mlig455_067123 {REF} {Length: 2830} {Pfam: Group 7 allergen [PF16984.7, score=97.0]} {RNA1509_43789, RNA1509_5662} {RNA1310_3902, RNA1509_43789} {RNA1509_43789, RNA815_13325}
9. MligTC455_37301 189 3.93 Mlig455_045354

Neo: -

Age: logFC(26M/2M)=-0.332

Region-enriched R4: 2.328/0.04450

 ERBB4 0.967 0.967 - - - - - Mlig455_045354 {REF} {Length: 7327} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=295.2]; Protein kinase domain [PF00069.27, score=137.7]; Receptor L domain [PF01030.26, score=52.9]; Furin-like cysteine rich region [PF00757.22, score=50.3]; Growth factor receptor domain IV [PF14843.8, score=48.4]} {Human: ENSG00000178568, ERBB4, erb-b2 receptor tyrosine kinase 4, [RH, Score=362, Expect=1e-103]; ENSG00000146648, EGFR, epidermal growth factor receptor, [RH, Score=352, Expect=1e-100]} {Mouse: ENSMUSG00000020122, Egfr, epidermal growth factor receptor, [RH, Score=360, Expect=3e-103]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [RH, Score=509, Expect=3e-155]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [RH, Score=407, Expect=3e-119]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [RH, Score=504, Expect=6e-153]} {RNA1509_42246, RNA1509_47521, RNA1509_55812} {RNA1310_674, RNA1509_47521, RNA1509_55812} {RNA1509_47521, RNA1509_55812, RNA815_2089}
10. MligTC455_45615 406 8.46 Mlig455_000928

Neo: -

Age: -

Region-enriched R4: 2.544/0.03996

 ABHD16A 0.967 0.967 - - - - - Mlig455_000928 {REF} {Length: 3310} {TRANSSPLICED} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=27.9]; Serine aminopeptidase, S33 [PF12146.10, score=18.8]} {Human: ENSG00000224552, ABHD16A, abhydrolase domain containing 16A, [RH, Score=335, Expect=9e-108]; ENSG00000235676, ABHD16A, abhydrolase domain containing 16A, [RH, Score=335, Expect=9e-108]; ENSG00000231488, ABHD16A, abhydrolase domain containing 16A, [RH, Score=335, Expect=9e-108]; ENSG00000230475, ABHD16A, abhydrolase domain containing 16A, [RH, Score=335, Expect=9e-108]; ENSG00000204427, ABHD16A, abhydrolase domain containing 16A, [RH, Score=335, Expect=9e-108]; ENSG00000236063, ABHD16A, abhydrolase domain containing 16A, [RH, Score=335, Expect=9e-108]; ENSG00000206403, ABHD16A, abhydrolase domain containing 16A, [RH, Score=335, Expect=9e-108]} {Mouse: ENSMUSG00000007036, Abhd16a, abhydrolase domain containing 16A, [Score=332, Expect=1e-106]} {Dmel: FBgn0035519, CG1309, [Score=273, Expect=2e-84]} {Celegans: WBGene00018131, F37A4.1, [RH, Score=202, Expect=4e-58]} {Smed: dd_Smed_v6_4938_0_1, dd_Smed_v6_4938_0_1, [RH, Score=359, Expect=1e-117]} {RNA1509_5901} {RNA1310_8031, RNA1509_5901} {RNA1509_5901, RNA815_11851}
11. MligTC455_30059 146 3.03 Mlig455_037493

Neo: -

Age: Down-Up-Down

 0.965 - - - - - 0.965 Mlig455_037493 {REF} {Length: 1507} {Pfam: EGF-like domain [PF07974.15, score=26.0]} {RNA1509_9418} {RNA1310_2624} {RNA815_768.1}
12. MligTC455_24236 167 3.48 Mlig455_029060

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.394

 TNK2 0.964 0.964 - - - - - Mlig455_029060 {REF} {Length: 4828} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=100.5]; Protein kinase domain [PF00069.27, score=35.9]; GTPase binding [PF09027.12, score=21.2]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [Score=100, Expect=2e-21]; ENSG00000007264, MATK, megakaryocyte-associated tyrosine kinase, [Score=99.0, Expect=5e-21]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [Score=100, Expect=5e-21]; ENSMUSG00000004933, Matk, megakaryocyte-associated tyrosine kinase, [Score=98.2, Expect=5e-21]} {Dmel: FBgn0263998, Ack-like, Activated Cdc42 kinase-like, [Score=136, Expect=3e-32]} {Celegans: WBGene00000186, ark-1, Ack-related non-receptor tyrosine kinase, [Score=112, Expect=5e-25]} {Smed: dd_Smed_v6_10115_0_1, dd_Smed_v6_10115_0_1, [Score=151, Expect=3e-37]} {RNA1509_39176, RNA1509_58109} {RNA1310_5146, RNA1509_39176, RNA1509_58109} {RNA1509_39176, RNA1509_58109, RNA815_20800}
13. MligTC455_19556 352 7.33 Mlig455_021677

Neo: -

Age: -

 MYLK 0.962 0.962 - - - - - Mlig455_021677 {REF} {Length: 3689} {Pfam: Protein kinase domain [PF00069.27, score=237.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=124.3]} {Human: ENSG00000065534, MYLK, myosin light chain kinase, [Score=352, Expect=3e-108]} {Mouse: ENSMUSG00000022836, Mylk, myosin, light polypeptide kinase, [Score=351, Expect=7e-108]} {Dmel: FBgn0265045, Strn-Mlck, Stretchin-Mlck, [RH, Score=324, Expect=1e-98]} {Celegans: WBGene00013869, mlck-1, Myosin Light Chain Kinase related, [RH, Score=281, Expect=1e-84]} {Smed: dd_Smed_v6_7046_0_1, dd_Smed_v6_7046_0_1, [RH, Score=410, Expect=2e-142]} {RNA1509_7333} {RNA1310_4794} {RNA815_7188}
14. MligTC455_16870 298 6.2 Mlig455_048085

Neo: -

Age: -

 SLCO3A1 0.961 - - - - - 0.961 Mlig455_048085 {REF} {Length: 2716} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=287.0]; Major Facilitator Superfamily [PF07690.18, score=39.0]} {Human: ENSG00000176463, SLCO3A1, solute carrier organic anion transporter family member 3A1, [Score=160, Expect=6e-41]; ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=156, Expect=3e-39]; ENSG00000084453, SLCO1A2, solute carrier organic anion transporter family member 1A2, [Score=156, Expect=1e-39]; ENSG00000139155, SLCO1C1, solute carrier organic anion transporter family member 1C1, [Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000030237, Slco1a4, solute carrier organic anion transporter family, member 1a4, [Score=163, Expect=4e-42]; ENSMUSG00000063975, Slco1a5, solute carrier organic anion transporter family, member 1a5, [Score=162, Expect=1e-41]; ENSMUSG00000025790, Slco3a1, solute carrier organic anion transporter family, member 3a1, [Score=159, Expect=1e-40]; ENSMUSG00000079262, Slco1a6, solute carrier organic anion transporter family, member 1a6, [Score=159, Expect=6e-41]; ENSMUSG00000030737, Slco2b1, solute carrier organic anion transporter family, member 2b1, [Score=155, Expect=2e-39]} {Dmel: FBgn0036732, Oatp74D, Organic anion transporting polypeptide 74D, [Score=153, Expect=1e-38]} {Celegans: WBGene00009023, F21G4.1, Solute carrier organic anion transporter family member, [Score=160, Expect=1e-41]} {Smed: dd_Smed_v6_3499_0_1, dd_Smed_v6_3499_0_1, [RH, Score=406, Expect=2e-133]} {RNA1509_25721} {RNA1310_8958} {RNA815_2912}
15. MligTC455_12568 248 5.16 Mlig455_004338

Neo: -

Age: Down-Down-Up

Region-enriched R3: 2.930/0.00096

 0.958 - - - - - 0.958 Mlig455_004338 {REF} {Length: 1045} {RNA1509_26863} {RNA1310_9636.1, RNA1509_26863} {RNA1509_26863, RNA815_47943}
16. MligTC455_16869 268 5.59 Mlig455_019667

Neo: -

Age: -

 SLCO3A1 0.958 - - - - - 0.958 Mlig455_019667 {REF} {Length: 2659} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=281.1]; Major Facilitator Superfamily [PF07690.18, score=40.0]} {Human: ENSG00000176463, SLCO3A1, solute carrier organic anion transporter family member 3A1, [Score=164, Expect=3e-42]; ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=164, Expect=8e-42]; ENSG00000084453, SLCO1A2, solute carrier organic anion transporter family member 1A2, [Score=159, Expect=8e-41]} {Mouse: ENSMUSG00000063975, Slco1a5, solute carrier organic anion transporter family, member 1a5, [Score=166, Expect=3e-43]; ENSMUSG00000030237, Slco1a4, solute carrier organic anion transporter family, member 1a4, [Score=166, Expect=5e-43]; ENSMUSG00000025790, Slco3a1, solute carrier organic anion transporter family, member 3a1, [Score=163, Expect=3e-42]; ENSMUSG00000079262, Slco1a6, solute carrier organic anion transporter family, member 1a6, [Score=161, Expect=1e-41]; ENSMUSG00000025938, Slco5a1, solute carrier organic anion transporter family, member 5A1, [Score=159, Expect=2e-40]} {Dmel: FBgn0036732, Oatp74D, Organic anion transporting polypeptide 74D, [Score=156, Expect=1e-39]} {Celegans: WBGene00009023, F21G4.1, Solute carrier organic anion transporter family member, [Score=164, Expect=6e-43]} {Smed: dd_Smed_v6_3499_0_1, dd_Smed_v6_3499_0_1, [RH, Score=411, Expect=2e-135]} {RNA1509_19760, RNA1509_25721} {RNA1310_8958, RNA1509_19760, RNA1509_25721} {RNA1509_19760, RNA1509_25721, RNA815_2912}
17. MligTC455_30398 332 6.92 Mlig455_029585, Mlig455_029606, Mlig455_061517

Neo: -

Age: -

Region-enriched R4: 5.143/0.00000

 0.958 - - - - - 0.958

Mlig455_029585 {REF} {Length: 1248} {RNA1310_21610.1} {RNA815_16631}

Mlig455_029606 {REF} {Length: 1243} {RNA1310_21610.1} {RNA815_16631}

Mlig455_061517 {REF} {Length: 1435} {RNA1310_21610.1} {RNA815_16631}
18. MligTC455_30088 800 16.66 Mlig455_063904

Neo: -

Age: logFC(26M/2M)=-0.306

Region-enriched R3: 1.817/0.00000

 0.956 - - - - - 0.956 Mlig455_063904 {REF} {Length: 1795} {RNA1509_10776} {RNA1310_13617} {RNA815_8374.1}
19. MligTC455_19905 396 8.25 Mlig455_041113

Neo: -

Age: -

 CLIP1 0.954 0.954 - - - - - Mlig455_041113 {REF} {Length: 3229} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=148.6]; CLIP1 zinc knuckle [PF16641.7, score=54.0]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=26.6]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=22.0]; Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=19.3]; Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=18.9]; PDZ domain of MCC-2 bdg protein for Usher syndrome [PF10506.11, score=18.9]} {Human: ENSG00000130779, CLIP1, CAP-Gly domain containing linker protein 1, [RH, Score=224, Expect=8e-61]; ENSG00000106665, CLIP2, CAP-Gly domain containing linker protein 2, [RH, Score=214, Expect=1e-57]} {Mouse: ENSMUSG00000049550, Clip1, CAP-GLY domain containing linker protein 1, [RH, Score=221, Expect=1e-59]; ENSMUSG00000063146, Clip2, CAP-GLY domain containing linker protein 2, [RH, Score=212, Expect=4e-57]} {Dmel: FBgn0020503, CLIP-190, Cytoplasmic linker protein 190, [RH, Score=214, Expect=1e-57]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [Score=72.4, Expect=8e-13]} {Smed: dd_Smed_v6_6651_0_1, dd_Smed_v6_6651_0_1, [RH, Score=191, Expect=1e-50]} {RNA1509_59311, RNA1509_6017} {RNA1310_1622, RNA1509_59311, RNA1509_6017} {RNA1509_59311, RNA1509_6017, RNA815_1338}
20. MligTC455_19700 179 3.74 Mlig455_039813

Neo: -

Age: -

 GHDC 0.953 - - - - - 0.953 Mlig455_039813 {REF} {Length: 2554} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=339.6]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [RH, Score=81.3, Expect=2e-15]} {RNA1509_33021, RNA1509_43178, RNA1509_54770} {RNA1310_1835.2, RNA1509_33021, RNA1509_43178, RNA1509_54770} {RNA1509_33021, RNA1509_43178, RNA1509_54770, RNA815_4021}
21. MligTC455_48459 512 10.67 Mlig455_033033, Mlig455_044089

Neo: -

Age: logFC(26M/2M)=-0.316

Region-enriched R2: 2.708/0.00709

 CSMD3 0.952 0.952 - - - - -

Mlig455_033033 {REF} {Length: 2936} {Pfam: Sushi repeat (SCR repeat) [PF00084.22, score=194.1]} {Human: ENSG00000164796, CSMD3, CUB and Sushi multiple domains 3, [Score=161, Expect=2e-40]; ENSG00000183117, CSMD1, CUB and Sushi multiple domains 1, [Score=156, Expect=5e-39]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=155, Expect=1e-38]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=159, Expect=5e-40]; ENSMUSG00000060924, Csmd1, CUB and Sushi multiple domains 1, [Score=152, Expect=9e-38]} {Dmel: FBgn0032797, Hasp, Hig-anchoring scaffold protein, [Score=198, Expect=2e-53]} {Celegans: WBGene00002976, lev-9, [Score=123, Expect=3e-29]} {Smed: dd_Smed_v6_13071_0_1, dd_Smed_v6_13071_0_1, [RH, Score=296, Expect=2e-91]} {RNA1509_30688} {RNA1310_7890} {RNA815_3410.1}

Mlig455_044089 {REF} {Length: 2934} {Pfam: Sushi repeat (SCR repeat) [PF00084.22, score=194.1]} {Human: ENSG00000164796, CSMD3, CUB and Sushi multiple domains 3, [Score=161, Expect=2e-40]; ENSG00000183117, CSMD1, CUB and Sushi multiple domains 1, [Score=156, Expect=5e-39]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=155, Expect=1e-38]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=159, Expect=5e-40]; ENSMUSG00000060924, Csmd1, CUB and Sushi multiple domains 1, [Score=152, Expect=9e-38]} {Dmel: FBgn0032797, Hasp, Hig-anchoring scaffold protein, [Score=198, Expect=2e-53]} {Celegans: WBGene00002976, lev-9, [Score=123, Expect=3e-29]} {Smed: dd_Smed_v6_13071_0_1, dd_Smed_v6_13071_0_1, [RH, Score=296, Expect=2e-91]} {RNA1509_30688} {RNA1310_7890, RNA1509_30688} {RNA1509_30688, RNA815_3410.1}
22. MligTC455_09226 14 0.29 Mlig455_045296

Neo: Irradiation

Age: -

 0.951 - - - - 0.951 - Mlig455_045296 {REF} {Length: 909} {TRANSSPLICED} {RNA1509_9817} {RNA1310_14959.1} {RNA815_22311}
23. MligTC455_16185 45 0.94 Mlig455_035784

Neo: -

Age: Up-Down-Up

Region-enriched R8: 5.367/0.04197

 0.951 - - - - 0.951 - Mlig455_035784 {REF} {Length: 3607} {TRANSSPLICED} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=24.0]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=22.2]; Metallo-peptidase family M12 [PF13688.8, score=19.0]} {Mouse: ENSMUSG00000058145, Adamts17, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17, [Score=50.1, Expect=6e-06]} {RNA1509_59538} {RNA1310_25472.1} {RNA815_44251}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA